RNA–Protein interactions for RNA: ENST00000263897.9

USE1-201, Transcript of unconventional SNARE in the ER 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene USE1, Length 843 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-201ENST00000263897 ADAP2Q9NPF8 381 aa15□□□□□ -0.01
USE1-201ENST00000263897 SEC14L3Q9UDX4 400 aa15□□□□□ -0.01
USE1-201ENST00000263897 VTI1BQ9UEU0 232 aa15□□□□□ -0.01
USE1-201ENST00000263897 ZNF180Q9UJW8 692 aa15□□□□□ -0.01
USE1-201ENST00000263897 ZNF223Q9UK11 482 aaPredicted RBP15□□□□□ -0.01
USE1-201ENST00000263897 UNC79Q9P2D8 2635 aa15□□□□□ -0.01
USE1-201ENST00000263897 NOTCH2Q04721 2471 aa15□□□□□ -0.01
USE1-201ENST00000263897 A0A087WUV0 522 aaPredicted RBP14.99□□□□□ -0.01
USE1-201ENST00000263897 TRBV11-1A0A0K0K1C0 115 aa14.99□□□□□ -0.01
USE1-201ENST00000263897 MYOCOSA0A1B0GUC4 107 aa14.99□□□□□ -0.01
USE1-201ENST00000263897 A0A1B0GUH1 482 aa14.99□□□□□ -0.01
USE1-201ENST00000263897 ASPDHA6ND91 283 aa14.99□□□□□ -0.01
USE1-201ENST00000263897 POC1B-GALNT4F8VUJ3 575 aa14.99□□□□□ -0.01
USE1-201ENST00000263897 H0YIV9 168 aa14.99□□□□□ -0.01
USE1-201ENST00000263897 SAP18O00422 153 aaKnown RBP14.99□□□□□ -0.01
USE1-201ENST00000263897 FCHO1O14526 889 aa14.99□□□□□ -0.01
USE1-201ENST00000263897 UGDHO60701 494 aa14.99□□□□□ -0.01
USE1-201ENST00000263897 UNC5CO95185 931 aa14.99□□□□□ -0.01
USE1-201ENST00000263897 SIX3O95343 332 aaPredicted RBP14.99□□□□□ -0.01
USE1-201ENST00000263897 CLDN1O95832 211 aa14.99□□□□□ -0.01
USE1-201ENST00000263897 IFNA16P05015 189 aa14.99□□□□□ -0.01
USE1-201ENST00000263897 COL6A2P12110 1019 aa14.99□□□□□ -0.01
USE1-201ENST00000263897 PTX3P26022 381 aaPredicted RBP14.99□□□□□ -0.01
USE1-201ENST00000263897 CNTFP26441 200 aa14.99□□□□□ -0.01
USE1-201ENST00000263897 SSR2P43308 183 aa14.99□□□□□ -0.01
USE1-201ENST00000263897 PIK3CGP48736 1102 aa14.99□□□□□ -0.01
USE1-201ENST00000263897 HLCSP50747 726 aa14.99□□□□□ -0.01
USE1-201ENST00000263897 PER3P56645 1201 aa14.99□□□□□ -0.01
USE1-201ENST00000263897 STX4Q12846 297 aa14.99□□□□□ -0.01
USE1-201ENST00000263897 DDX39BQ13838 428 aaKnown RBP14.99□□□□□ -0.01
USE1-201ENST00000263897 ELAVL1Q15717 326 aaKnown RBP14.99□□□□□ -0.01
USE1-201ENST00000263897 MAPKAPK3Q16644 382 aa14.99□□□□□ -0.01
USE1-201ENST00000263897 TAOK1Q7L7X3 1001 aa14.99□□□□□ -0.01
USE1-201ENST00000263897 MAMDC2Q7Z304 686 aaPredicted RBP14.99□□□□□ -0.01
USE1-201ENST00000263897 GALNTL5Q7Z4T8 443 aa14.99□□□□□ -0.01
USE1-201ENST00000263897 GOLGA7Q7Z5G4 137 aa14.99□□□□□ -0.01
USE1-201ENST00000263897 CEP112Q8N8E3 955 aa14.99□□□□□ -0.01
USE1-201ENST00000263897 L3MBTL4Q8NA19 623 aa14.99□□□□□ -0.01
USE1-201ENST00000263897 UHMK1Q8TAS1 419 aaKnown RBP14.99□□□□□ -0.01
USE1-201ENST00000263897 THAP3Q8WTV1 239 aaPredicted RBP14.99□□□□□ -0.01
USE1-201ENST00000263897 DCAKDQ8WVC6 231 aa14.99□□□□□ -0.01
USE1-201ENST00000263897 NCLNQ969V3 563 aa14.99□□□□□ -0.01
USE1-201ENST00000263897 RELTQ969Z4 430 aa14.99□□□□□ -0.01
USE1-201ENST00000263897 MTERF1Q99551 399 aaKnown RBP14.99□□□□□ -0.01
USE1-201ENST00000263897 FBXW2Q9UKT8 454 aa14.99□□□□□ -0.01
USE1-201ENST00000263897 NFU1Q9UMS0 254 aa14.99□□□□□ -0.01
USE1-201ENST00000263897 CLCA3PQ9Y6N3 262 aa14.99□□□□□ -0.01
USE1-201ENST00000263897 SPACA6W5XKT8 324 aa14.99□□□□□ -0.01
USE1-201ENST00000263897 GTF3C1Q12789 2109 aa14.99□□□□□ -0.01
USE1-201ENST00000263897 PCNX1Q96RV3 2341 aa14.98□□□□□ -0.01
USE1-201ENST00000263897 TRIM49D1C9J1S8 452 aa14.98□□□□□ -0.01
USE1-201ENST00000263897 LDB3O75112 727 aa14.98□□□□□ -0.01
USE1-201ENST00000263897 SLC25A12O75746 678 aa14.98□□□□□ -0.01
USE1-201ENST00000263897 ZFAND5O76080 213 aa14.98□□□□□ -0.01
USE1-201ENST00000263897 CPN2P22792 545 aa14.98□□□□□ -0.01
USE1-201ENST00000263897 ARFIP1P53367 373 aa14.98□□□□□ -0.01
USE1-201ENST00000263897 SLAMF1Q13291 335 aa14.98□□□□□ -0.01
USE1-201ENST00000263897 SERTAD2Q14140 314 aa14.98□□□□□ -0.01
USE1-201ENST00000263897 CPSF6Q16630 551 aaKnown RBP eCLIP14.98□□□□□ -0.01
USE1-201ENST00000263897 KRTCAP3Q53RY4 240 aa14.98□□□□□ -0.01
USE1-201ENST00000263897 PNPLA5Q7Z6Z6 429 aaPredicted RBP14.98□□□□□ -0.01
USE1-201ENST00000263897 IFT20Q8IY31 132 aa14.98□□□□□ -0.01
USE1-201ENST00000263897 PTGR2Q8N8N7 351 aaPredicted RBP14.98□□□□□ -0.01
USE1-201ENST00000263897 FAM98AQ8NCA5 519 aaKnown RBP14.98□□□□□ -0.01
USE1-201ENST00000263897 MORN4Q8NDC4 146 aa14.98□□□□□ -0.01
USE1-201ENST00000263897 PTPMT1Q8WUK0 201 aaPredicted RBP14.98□□□□□ -0.01
USE1-201ENST00000263897 DAZLQ92904 295 aaKnown RBP14.98□□□□□ -0.01
USE1-201ENST00000263897 ANKRD9Q96BM1 317 aaPredicted RBP14.98□□□□□ -0.01
USE1-201ENST00000263897 REPS1Q96D71 796 aa14.98□□□□□ -0.01
USE1-201ENST00000263897 CCDC77Q9BR77 488 aa14.98□□□□□ -0.01
USE1-201ENST00000263897 SORBS1Q9BX66 1292 aaKnown RBP14.98□□□□□ -0.01
USE1-201ENST00000263897 DMRT3Q9NQL9 472 aa14.98□□□□□ -0.01
USE1-201ENST00000263897 PSD3Q9NYI0 1048 aa14.98□□□□□ -0.01
USE1-201ENST00000263897 TMCO1Q9UM00 188 aa14.98□□□□□ -0.01
USE1-201ENST00000263897 RNF11Q9Y3C5 154 aa14.98□□□□□ -0.01
USE1-201ENST00000263897 PLPP1O14494 284 aa14.97□□□□□ -0.01
USE1-201ENST00000263897 NME2P1O60361 137 aa14.97□□□□□ -0.01
USE1-201ENST00000263897 SNRPAP09012 282 aaKnown RBP14.97□□□□□ -0.01
USE1-201ENST00000263897 TNNI3P19429 210 aa14.97□□□□□ -0.01
USE1-201ENST00000263897 NME2P22392 152 aa14.97□□□□□ -0.01
USE1-201ENST00000263897 RAP1GDS1P52306 607 aa14.97□□□□□ -0.01
USE1-201ENST00000263897 RPS13P62277 151 aaKnown RBP14.97□□□□□ -0.01
USE1-201ENST00000263897 ALDH6A1Q02252 535 aaKnown RBP14.97□□□□□ -0.01
USE1-201ENST00000263897 TSNAXIP1Q2TAA8 658 aa14.97□□□□□ -0.01
USE1-201ENST00000263897 ZNF800Q2TB10 664 aaPredicted RBP eCLIP14.97□□□□□ -0.01
USE1-201ENST00000263897 C1QL3Q5VWW1 255 aa14.97□□□□□ -0.01
USE1-201ENST00000263897 FJX1Q86VR8 437 aa14.97□□□□□ -0.01
USE1-201ENST00000263897 ZCCHC7Q8N3Z6 543 aaKnown RBP14.97□□□□□ -0.01
USE1-201ENST00000263897 C7orf57Q8NEG2 295 aa14.97□□□□□ -0.01
USE1-201ENST00000263897 WDR20Q8TBZ3 569 aa14.97□□□□□ -0.01
USE1-201ENST00000263897 TMEM125Q96AQ2 219 aa14.97□□□□□ -0.01
USE1-201ENST00000263897 PHF21BQ96EK2 531 aa14.97□□□□□ -0.01
USE1-201ENST00000263897 SCYL1Q96KG9 808 aa14.97□□□□□ -0.01
USE1-201ENST00000263897 FRMD6Q96NE9 622 aa14.97□□□□□ -0.01
USE1-201ENST00000263897 CENPKQ9BS16 269 aa14.97□□□□□ -0.01
USE1-201ENST00000263897 NOL11Q9H8H0 719 aaKnown RBP14.97□□□□□ -0.01
USE1-201ENST00000263897 MS4A12Q9NXJ0 267 aa14.97□□□□□ -0.01
USE1-201ENST00000263897 YARS2Q9Y2Z4 477 aaKnown RBP14.97□□□□□ -0.01
USE1-201ENST00000263897 TMEM200CA6NKL6 621 aa14.96□□□□□ -0.01
USE1-201ENST00000263897 STX16-NPEPL1H3BU86 382 aa14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms