RNA–Protein interactions for RNA: ENST00000263073.10

SMG6-201, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG6, Length 5,960 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-201ENST00000263073 DNAJB13P59910 316 aa11.61□□□□□ -0.55
SMG6-201ENST00000263073 FPGSQ05932 587 aa11.61□□□□□ -0.55
SMG6-201ENST00000263073 RHEBQ15382 184 aa11.61□□□□□ -0.55
SMG6-201ENST00000263073 DESI1Q6ICB0 168 aa11.61□□□□□ -0.55
SMG6-201ENST00000263073 CLECL1Q8IZS7 167 aa11.61□□□□□ -0.55
SMG6-201ENST00000263073 DBF4BQ8NFT6 615 aa11.61□□□□□ -0.55
SMG6-201ENST00000263073 MAPK15Q8TD08 544 aa11.61□□□□□ -0.55
SMG6-201ENST00000263073 GNPDA2Q8TDQ7 276 aa11.61□□□□□ -0.55
SMG6-201ENST00000263073 NSMAFQ92636 917 aa11.61□□□□□ -0.55
SMG6-201ENST00000263073 SLC25A44Q96H78 314 aaPredicted RBP11.61□□□□□ -0.55
SMG6-201ENST00000263073 SLC29A1Q99808 456 aa11.61□□□□□ -0.55
SMG6-201ENST00000263073 FAM120CQ9NX05 1096 aaKnown RBP11.61□□□□□ -0.55
SMG6-201ENST00000263073 NPIPA1Q9UND3 350 aa11.61□□□□□ -0.55
SMG6-201ENST00000263073 A0A1W2PPL8 197 aa11.6□□□□□ -0.55
SMG6-201ENST00000263073 DENRO43583 198 aaKnown RBP11.6□□□□□ -0.55
SMG6-201ENST00000263073 MAP4K2Q12851 820 aa11.6□□□□□ -0.55
SMG6-201ENST00000263073 ELP2Q6IA86 826 aa11.6□□□□□ -0.55
SMG6-201ENST00000263073 TMIGD1Q6UXZ0 262 aa11.6□□□□□ -0.55
SMG6-201ENST00000263073 MFSD8Q8NHS3 518 aa11.6□□□□□ -0.55
SMG6-201ENST00000263073 TRUB1Q8WWH5 349 aaKnown RBP11.6□□□□□ -0.55
SMG6-201ENST00000263073 NUFIP1Q9UHK0 495 aaKnown RBP11.6□□□□□ -0.55
SMG6-201ENST00000263073 TMEM5Q9Y2B1 443 aa11.6□□□□□ -0.55
SMG6-201ENST00000263073 KRBA1A5PL33 1030 aa11.6□□□□□ -0.55
SMG6-201ENST00000263073 SLC19A2O60779 497 aa11.6□□□□□ -0.55
SMG6-201ENST00000263073 CAPN15O75808 1086 aa11.6□□□□□ -0.55
SMG6-201ENST00000263073 ANXA3P12429 323 aa11.6□□□□□ -0.55
SMG6-201ENST00000263073 WDTC1Q8N5D0 677 aa11.6□□□□□ -0.55
SMG6-201ENST00000263073 PUM2Q8TB72 1066 aaKnown RBP eCLIP11.6□□□□□ -0.55
SMG6-201ENST00000263073 EFCAB11Q9BUY7 163 aa11.6□□□□□ -0.55
SMG6-201ENST00000263073 BTBD1Q9H0C5 482 aa11.6□□□□□ -0.55
SMG6-201ENST00000263073 ABCG5Q9H222 651 aa11.6□□□□□ -0.55
SMG6-201ENST00000263073 ZNF701Q9NV72 531 aaPredicted RBP11.6□□□□□ -0.55
SMG6-201ENST00000263073 ERVW-1Q9UQF0 538 aa11.6□□□□□ -0.55
SMG6-201ENST00000263073 PEAK1Q9H792 1746 aa11.6□□□□□ -0.55
SMG6-201ENST00000263073 IL3P08700 152 aa11.6□□□□□ -0.55
SMG6-201ENST00000263073 LAG3P18627 525 aa11.6□□□□□ -0.55
SMG6-201ENST00000263073 GATMP50440 423 aa11.6□□□□□ -0.55
SMG6-201ENST00000263073 SNU13P55769 128 aaKnown RBP11.6□□□□□ -0.55
SMG6-201ENST00000263073 EIF5AP63241 154 aaKnown RBP11.6□□□□□ -0.55
SMG6-201ENST00000263073 NPRL3Q12980 569 aa11.6□□□□□ -0.55
SMG6-201ENST00000263073 COL28A1Q2UY09 1125 aa11.6□□□□□ -0.55
SMG6-201ENST00000263073 GPR33Q49SQ1 333 aa11.6□□□□□ -0.55
SMG6-201ENST00000263073 GTDC1Q4AE62 458 aa11.6□□□□□ -0.55
SMG6-201ENST00000263073 ADGRF1Q5T601 910 aa11.6□□□□□ -0.55
SMG6-201ENST00000263073 CHADLQ6NUI6 762 aa11.6□□□□□ -0.55
SMG6-201ENST00000263073 ANKRD54Q6NXT1 300 aa11.6□□□□□ -0.55
SMG6-201ENST00000263073 IGFN1Q86VF2 1251 aa11.6□□□□□ -0.55
SMG6-201ENST00000263073 ZNF611Q8N823 705 aa11.6□□□□□ -0.55
SMG6-201ENST00000263073 SRRDQ9UH36 339 aa11.6□□□□□ -0.55
SMG6-201ENST00000263073 SCDO00767 359 aa11.6□□□□□ -0.55
SMG6-201ENST00000263073 NTRK2Q16620 822 aa11.6□□□□□ -0.55
SMG6-201ENST00000263073 CDNFQ49AH0 187 aa11.6□□□□□ -0.55
SMG6-201ENST00000263073 KANK2Q63ZY3 851 aa11.6□□□□□ -0.55
SMG6-201ENST00000263073 REEP3Q6NUK4 255 aa11.6□□□□□ -0.55
SMG6-201ENST00000263073 TSPEARQ8WU66 669 aa11.6□□□□□ -0.55
SMG6-201ENST00000263073 MRGPRX2Q96LB1 330 aa11.6□□□□□ -0.55
SMG6-201ENST00000263073 BIRC8Q96P09 236 aa11.6□□□□□ -0.55
SMG6-201ENST00000263073 SLC29A3Q9BZD2 475 aa11.6□□□□□ -0.55
SMG6-201ENST00000263073 NLE1Q9NVX2 485 aaPredicted RBP11.6□□□□□ -0.55
SMG6-201ENST00000263073 EXOSC1Q9Y3B2 195 aaKnown RBP11.6□□□□□ -0.55
SMG6-201ENST00000263073 A0A0A6YYH2 397 aa11.6□□□□□ -0.55
SMG6-201ENST00000263073 A6NJ64 397 aa11.6□□□□□ -0.55
SMG6-201ENST00000263073 RNF13O43567 381 aa11.6□□□□□ -0.55
SMG6-201ENST00000263073 AKR1C4P17516 323 aa11.6□□□□□ -0.55
SMG6-201ENST00000263073 PTPN6P29350 595 aa11.6□□□□□ -0.55
SMG6-201ENST00000263073 HK3P52790 923 aa11.6□□□□□ -0.55
SMG6-201ENST00000263073 RFTN1Q14699 578 aaPredicted RBP11.6□□□□□ -0.55
SMG6-201ENST00000263073 GPRC6AQ5T6X5 926 aa11.6□□□□□ -0.55
SMG6-201ENST00000263073 RPLP0P6Q8NHW5 317 aa11.6□□□□□ -0.55
SMG6-201ENST00000263073 NETO1Q8TDF5 533 aa11.6□□□□□ -0.55
SMG6-201ENST00000263073 NPLQ9BXD5 320 aaPredicted RBP11.6□□□□□ -0.55
SMG6-201ENST00000263073 SLC5A7Q9GZV3 580 aa11.6□□□□□ -0.55
SMG6-201ENST00000263073 KCNN3Q9UGI6 736 aa11.6□□□□□ -0.55
SMG6-201ENST00000263073 MSRAQ9UJ68 235 aa11.6□□□□□ -0.55
SMG6-201ENST00000263073 PCDHGB1Q9Y5G3 927 aa11.6□□□□□ -0.55
SMG6-201ENST00000263073 PCDHGA7Q9Y5G6 932 aa11.6□□□□□ -0.55
SMG6-201ENST00000263073 MAGED1Q9Y5V3 778 aaPredicted RBP11.6□□□□□ -0.55
SMG6-201ENST00000263073 RBM47A0AV96 593 aaKnown RBP11.59□□□□□ -0.55
SMG6-201ENST00000263073 E2F3O00716 465 aa11.59□□□□□ -0.55
SMG6-201ENST00000263073 FHP07954 510 aa11.59□□□□□ -0.55
SMG6-201ENST00000263073 EPCAMP16422 314 aa11.59□□□□□ -0.55
SMG6-201ENST00000263073 F8A1P23610 371 aa11.59□□□□□ -0.55
SMG6-201ENST00000263073 RFC2P35250 354 aa11.59□□□□□ -0.55
SMG6-201ENST00000263073 SOX3P41225 446 aa11.59□□□□□ -0.55
SMG6-201ENST00000263073 POU4F3Q15319 338 aa11.59□□□□□ -0.55
SMG6-201ENST00000263073 ZNF630Q2M218 657 aaPredicted RBP11.59□□□□□ -0.55
SMG6-201ENST00000263073 RPS26P11Q5JNZ5 115 aaPredicted RBP11.59□□□□□ -0.55
SMG6-201ENST00000263073 TTLL10Q6ZVT0 673 aa11.59□□□□□ -0.55
SMG6-201ENST00000263073 TMPRSS12Q86WS5 348 aa11.59□□□□□ -0.55
SMG6-201ENST00000263073 LRR1Q96L50 414 aa11.59□□□□□ -0.55
SMG6-201ENST00000263073 PRDM9Q9NQV7 894 aa11.59□□□□□ -0.55
SMG6-201ENST00000263073 GOSR2O14653 212 aa11.59□□□□□ -0.55
SMG6-201ENST00000263073 T-ENOLP0DO92 83 aa11.59□□□□□ -0.55
SMG6-201ENST00000263073 OXTRP30559 389 aa11.59□□□□□ -0.55
SMG6-201ENST00000263073 LSSP48449 732 aa11.59□□□□□ -0.55
SMG6-201ENST00000263073 HLCSP50747 726 aa11.59□□□□□ -0.55
SMG6-201ENST00000263073 PPIGQ13427 754 aaKnown RBP eCLIP11.59□□□□□ -0.552e-6■■□□□ 12.8
SMG6-201ENST00000263073 FGFBP1Q14512 234 aa11.59□□□□□ -0.55
SMG6-201ENST00000263073 AADACL4Q5VUY2 407 aa11.59□□□□□ -0.55
SMG6-201ENST00000263073 CARD17Q5XLA6 110 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms