RNA–Protein interactions for RNA: ENST00000261058.2

CCDC54-201, Transcript of coiled-coil domain containing 54, humanhuman

APPRIS P1 BASIC

Gene CCDC54, Length 1,444 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC54-201ENST00000261058 MAGEC1O60732 1142 aa3.77□□□□□ -1.81
CCDC54-201ENST00000261058 BCAS2O75934 225 aaPredicted RBP3.77□□□□□ -1.81
CCDC54-201ENST00000261058 IGHEP01854 428 aa3.77□□□□□ -1.81
CCDC54-201ENST00000261058 TSPY4P0CV99 314 aa3.77□□□□□ -1.81
CCDC54-201ENST00000261058 TSPY10P0CW01 314 aa3.77□□□□□ -1.81
CCDC54-201ENST00000261058 UROSP10746 265 aa3.77□□□□□ -1.81
CCDC54-201ENST00000261058 VCLP18206 1134 aa3.77□□□□□ -1.81
CCDC54-201ENST00000261058 MMP12P39900 470 aa3.77□□□□□ -1.81
CCDC54-201ENST00000261058 SYCP1Q15431 976 aa3.77□□□□□ -1.81
CCDC54-201ENST00000261058 FCN2Q15485 313 aa3.77□□□□□ -1.81
CCDC54-201ENST00000261058 CCDC40Q4G0X9 1142 aa3.77□□□□□ -1.81
CCDC54-201ENST00000261058 ARMCX4Q5H9R4 360 aa3.77□□□□□ -1.81
CCDC54-201ENST00000261058 ANGPTL8Q6UXH0 198 aa3.77□□□□□ -1.81
CCDC54-201ENST00000261058 FRRS1Q6ZNA5 592 aa3.77□□□□□ -1.81
CCDC54-201ENST00000261058 TRMT11Q7Z4G4 463 aaKnown RBP3.77□□□□□ -1.81
CCDC54-201ENST00000261058 CCDC65Q8IXS2 484 aa3.77□□□□□ -1.81
CCDC54-201ENST00000261058 TCEANCQ8N8B7 351 aa3.77□□□□□ -1.81
CCDC54-201ENST00000261058 KIAA0895Q8NCT3 520 aa3.77□□□□□ -1.81
CCDC54-201ENST00000261058 PRSS33Q8NF86 280 aa3.77□□□□□ -1.81
CCDC54-201ENST00000261058 OR2T6Q8NHC8 308 aa3.77□□□□□ -1.81
CCDC54-201ENST00000261058 PSMA8Q8TAA3 256 aa3.77□□□□□ -1.81
CCDC54-201ENST00000261058 TRIM7Q9C029 511 aa3.77□□□□□ -1.81
CCDC54-201ENST00000261058 SLC39A8Q9C0K1 460 aa3.77□□□□□ -1.81
CCDC54-201ENST00000261058 ZDHHC6Q9H6R6 413 aa3.77□□□□□ -1.81
CCDC54-201ENST00000261058 MED20Q9H944 212 aa3.77□□□□□ -1.81
CCDC54-201ENST00000261058 EXOC7Q9UPT5 735 aa3.77□□□□□ -1.81
CCDC54-201ENST00000261058 TMED5Q9Y3A6 229 aa3.77□□□□□ -1.81
CCDC54-201ENST00000261058 WIPI2Q9Y4P8 454 aa3.77□□□□□ -1.81
CCDC54-201ENST00000261058 CSNK1G3Q9Y6M4 447 aa3.77□□□□□ -1.81
CCDC54-201ENST00000261058 COLEC10Q9Y6Z7 277 aa3.77□□□□□ -1.81
CCDC54-201ENST00000261058 C13orf42A0A1B0GVH6 325 aa3.76□□□□□ -1.81
CCDC54-201ENST00000261058 GLTPD2A6NH11 291 aa3.76□□□□□ -1.81
CCDC54-201ENST00000261058 ZNF732B4DXR9 585 aa3.76□□□□□ -1.81
CCDC54-201ENST00000261058 ANGPT2O15123 496 aa3.76□□□□□ -1.81
CCDC54-201ENST00000261058 ARHGEF9O43307 516 aa3.76□□□□□ -1.81
CCDC54-201ENST00000261058 ZSCAN5DPP0CG00 497 aa3.76□□□□□ -1.81
CCDC54-201ENST00000261058 RNF224P0DH78 156 aa3.76□□□□□ -1.81
CCDC54-201ENST00000261058 TOP1P11387 765 aaKnown RBP3.76□□□□□ -1.81
CCDC54-201ENST00000261058 FERP16591 822 aa3.76□□□□□ -1.81
CCDC54-201ENST00000261058 CD9P21926 228 aa3.76□□□□□ -1.81
CCDC54-201ENST00000261058 TMOD1P28289 359 aa3.76□□□□□ -1.81
CCDC54-201ENST00000261058 HSPA1LP34931 641 aa3.76□□□□□ -1.81
CCDC54-201ENST00000261058 MAGEB1P43366 347 aa3.76□□□□□ -1.81
CCDC54-201ENST00000261058 TSFMP43897 325 aaKnown RBP3.76□□□□□ -1.81
CCDC54-201ENST00000261058 ATXN3P54252 364 aaPredicted RBP3.76□□□□□ -1.81
CCDC54-201ENST00000261058 HUNKP57058 714 aa3.76□□□□□ -1.81
CCDC54-201ENST00000261058 FKBP1BP68106 108 aa3.76□□□□□ -1.81
CCDC54-201ENST00000261058 CCNA1P78396 465 aa3.76□□□□□ -1.81
CCDC54-201ENST00000261058 IRX1P78414 480 aaPredicted RBP3.76□□□□□ -1.81
CCDC54-201ENST00000261058 CCDC173Q0VFZ6 552 aa3.76□□□□□ -1.81
CCDC54-201ENST00000261058 TEFQ10587 303 aa3.76□□□□□ -1.81
CCDC54-201ENST00000261058 NPRL3Q12980 569 aa3.76□□□□□ -1.81
CCDC54-201ENST00000261058 RABL6Q3YEC7 729 aaPredicted RBP3.76□□□□□ -1.81
CCDC54-201ENST00000261058 CCDC152Q4G0S7 254 aa3.76□□□□□ -1.81
CCDC54-201ENST00000261058 SLC39A12Q504Y0 691 aa3.76□□□□□ -1.81
CCDC54-201ENST00000261058 SPANXN4Q5MJ08 99 aa3.76□□□□□ -1.81
CCDC54-201ENST00000261058 CEP85LQ5SZL2 805 aa3.76□□□□□ -1.81
CCDC54-201ENST00000261058 WLSQ5T9L3 541 aa3.76□□□□□ -1.81
CCDC54-201ENST00000261058 LRRC38Q5VT99 294 aa3.76□□□□□ -1.81
CCDC54-201ENST00000261058 PLPP4Q5VZY2 271 aa3.76□□□□□ -1.81
CCDC54-201ENST00000261058 TPGS2Q68CL5 300 aa3.76□□□□□ -1.81
CCDC54-201ENST00000261058 TTC19Q6DKK2 380 aaPredicted RBP3.76□□□□□ -1.81
CCDC54-201ENST00000261058 ZNF613Q6PF04 617 aa3.76□□□□□ -1.81
CCDC54-201ENST00000261058 MACC1Q6ZN28 852 aa3.76□□□□□ -1.81
CCDC54-201ENST00000261058 KCTD9Q7L273 389 aa3.76□□□□□ -1.81
CCDC54-201ENST00000261058 KRTAP7-1Q8IUC3 87 aa3.76□□□□□ -1.81
CCDC54-201ENST00000261058 CCDC83Q8IWF9 413 aa3.76□□□□□ -1.81
CCDC54-201ENST00000261058 DRAXINQ8NBI3 349 aaPredicted RBP3.76□□□□□ -1.81
CCDC54-201ENST00000261058 ZNF519Q8TB69 540 aa3.76□□□□□ -1.81
CCDC54-201ENST00000261058 TUBGCP3Q96CW5 907 aa3.76□□□□□ -1.81
CCDC54-201ENST00000261058 DHTKD1Q96HY7 919 aaPredicted RBP3.76□□□□□ -1.81
CCDC54-201ENST00000261058 EPSTI1Q96J88 318 aa3.76□□□□□ -1.81
CCDC54-201ENST00000261058 IL12RB2Q99665 862 aa3.76□□□□□ -1.81
CCDC54-201ENST00000261058 ZNF559Q9BR84 538 aa3.76□□□□□ -1.81
CCDC54-201ENST00000261058 FGFBP2Q9BYJ0 223 aa3.76□□□□□ -1.81
CCDC54-201ENST00000261058 NACAP1Q9BZK3 213 aa3.76□□□□□ -1.81
CCDC54-201ENST00000261058 NACA2Q9H009 215 aa3.76□□□□□ -1.81
CCDC54-201ENST00000261058 RNPEPL1Q9HAU8 725 aa3.76□□□□□ -1.81
CCDC54-201ENST00000261058 POLKQ9UBT6 870 aa3.76□□□□□ -1.81
CCDC54-201ENST00000261058 ACEP12821 1306 aa3.75□□□□□ -1.81
CCDC54-201ENST00000261058 BRD4O60885 1362 aaPredicted RBP3.75□□□□□ -1.81
CCDC54-201ENST00000261058 NSD2O96028 1365 aa3.75□□□□□ -1.81
CCDC54-201ENST00000261058 A0A0A6YYC8 382 aaPredicted RBP3.75□□□□□ -1.81
CCDC54-201ENST00000261058 LINC00854A0A1B0GVQ3 168 aa3.75□□□□□ -1.81
CCDC54-201ENST00000261058 A0A1W2PRV1 198 aa3.75□□□□□ -1.81
CCDC54-201ENST00000261058 SLC9B1P1A6NJY1 282 aa3.75□□□□□ -1.81
CCDC54-201ENST00000261058 SRRM4A7MD48 611 aaKnown RBP3.75□□□□□ -1.81
CCDC54-201ENST00000261058 GPR89AB7ZAQ6 455 aa3.75□□□□□ -1.81
CCDC54-201ENST00000261058 G3V2L1 256 aa3.75□□□□□ -1.81
CCDC54-201ENST00000261058 I3L1I5 382 aaPredicted RBP3.75□□□□□ -1.81
CCDC54-201ENST00000261058 MAGEB2O15479 319 aa3.75□□□□□ -1.81
CCDC54-201ENST00000261058 RHOXF2BP0C7M4 288 aa3.75□□□□□ -1.81
CCDC54-201ENST00000261058 GPR89BP0CG08 455 aa3.75□□□□□ -1.81
CCDC54-201ENST00000261058 MTIF2P46199 727 aaKnown RBP3.75□□□□□ -1.81
CCDC54-201ENST00000261058 NUCB2P80303 420 aa3.75□□□□□ -1.81
CCDC54-201ENST00000261058 ABRQ12979 859 aa3.75□□□□□ -1.81
CCDC54-201ENST00000261058 GPR50Q13585 617 aa3.75□□□□□ -1.81
CCDC54-201ENST00000261058 PPP1R7Q15435 360 aa3.75□□□□□ -1.81
CCDC54-201ENST00000261058 CES4AQ5XG92 561 aa3.75□□□□□ -1.81
CCDC54-201ENST00000261058 TCEAL6Q6IPX3 200 aa3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms