RNA–Protein interactions for RNA: ENST00000260563.4

RTCA-201, Transcript of RNA 3'-terminal phosphate cyclase, humanhuman

TSL 1 (best) BASIC

Gene RTCA, Length 1,534 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCA-201ENST00000260563 PIK3R1P27986 724 aa19.55■□□□□ 0.72
RTCA-201ENST00000260563 DLSTP36957 453 aa19.55■□□□□ 0.72
RTCA-201ENST00000260563 OLR1P78380 273 aa19.55■□□□□ 0.72
RTCA-201ENST00000260563 MAT1AQ00266 395 aaKnown RBP19.55■□□□□ 0.72
RTCA-201ENST00000260563 CLN3Q13286 438 aa19.55■□□□□ 0.72
RTCA-201ENST00000260563 PTGR1Q14914 329 aa19.55■□□□□ 0.72
RTCA-201ENST00000260563 KRT72Q14CN4 511 aa19.55■□□□□ 0.72
RTCA-201ENST00000260563 NCF4Q15080 339 aa19.55■□□□□ 0.72
RTCA-201ENST00000260563 TGIF1Q15583 401 aa19.55■□□□□ 0.72
RTCA-201ENST00000260563 ZSCAN26Q16670 478 aa19.55■□□□□ 0.72
RTCA-201ENST00000260563 MLIPQ5VWP3 458 aa19.55■□□□□ 0.72
RTCA-201ENST00000260563 FAM9CQ8IZT9 166 aa19.55■□□□□ 0.72
RTCA-201ENST00000260563 NAF1Q96HR8 494 aaKnown RBP19.55■□□□□ 0.72
RTCA-201ENST00000260563 SLC22A11Q9NSA0 550 aa19.55■□□□□ 0.72
RTCA-201ENST00000260563 ZIM2Q9NZV7 527 aa19.55■□□□□ 0.72
RTCA-201ENST00000260563 TRPC4Q9UBN4 977 aa19.55■□□□□ 0.72
RTCA-201ENST00000260563 BAIAP2L1Q9UHR4 511 aa19.55■□□□□ 0.72
RTCA-201ENST00000260563 FRYQ5TBA9 3013 aa19.55■□□□□ 0.72
RTCA-201ENST00000260563 LOC101059948A0A1B0GTJ6 334 aa19.54■□□□□ 0.72
RTCA-201ENST00000260563 GNG14A0A1W2PPG7 69 aa19.54■□□□□ 0.72
RTCA-201ENST00000260563 C21orf140B9A014 251 aa19.54■□□□□ 0.72
RTCA-201ENST00000260563 UBOX5O94941 541 aa19.54■□□□□ 0.72
RTCA-201ENST00000260563 SCELO95171 688 aa19.54■□□□□ 0.72
RTCA-201ENST00000260563 GBAP04062 536 aa19.54■□□□□ 0.72
RTCA-201ENST00000260563 TACR1P25103 407 aa19.54■□□□□ 0.72
RTCA-201ENST00000260563 ATP5A1P25705 553 aaKnown RBP19.54■□□□□ 0.72
RTCA-201ENST00000260563 TPP2P29144 1249 aaPredicted RBP19.54■□□□□ 0.72
RTCA-201ENST00000260563 UFM1P61960 85 aa19.54■□□□□ 0.72
RTCA-201ENST00000260563 FOXK2Q01167 660 aa19.54■□□□□ 0.72
RTCA-201ENST00000260563 SYT16Q17RD7 645 aa19.54■□□□□ 0.72
RTCA-201ENST00000260563 CCNYL2Q5T2Q4 361 aa19.54■□□□□ 0.72
RTCA-201ENST00000260563 ACOT4Q8N9L9 421 aa19.54■□□□□ 0.72
RTCA-201ENST00000260563 OR5T3Q8NGG3 340 aa19.54■□□□□ 0.72
RTCA-201ENST00000260563 KIAA1143Q96AT1 154 aaPredicted RBP19.54■□□□□ 0.72
RTCA-201ENST00000260563 TSSK3Q96PN8 268 aa19.54■□□□□ 0.72
RTCA-201ENST00000260563 NPLQ9BXD5 320 aaPredicted RBP19.54■□□□□ 0.72
RTCA-201ENST00000260563 CLK4Q9HAZ1 481 aaKnown RBP19.54■□□□□ 0.72
RTCA-201ENST00000260563 MKKSQ9NPJ1 570 aaPredicted RBP19.54■□□□□ 0.72
RTCA-201ENST00000260563 CTSFQ9UBX1 484 aa19.54■□□□□ 0.72
RTCA-201ENST00000260563 ZNF282Q9UDV7 671 aaPredicted RBP19.54■□□□□ 0.72
RTCA-201ENST00000260563 CELSR3Q9NYQ7 3312 aa19.53■□□□□ 0.72
RTCA-201ENST00000260563 ARHGAP10A1A4S6 786 aa19.53■□□□□ 0.72
RTCA-201ENST00000260563 ANKRD28O15084 1053 aa19.53■□□□□ 0.72
RTCA-201ENST00000260563 EEDO75530 441 aaKnown RBP19.53■□□□□ 0.72
RTCA-201ENST00000260563 SLC22A3O75751 556 aa19.53■□□□□ 0.72
RTCA-201ENST00000260563 ALBP02768 609 aa19.53■□□□□ 0.72
RTCA-201ENST00000260563 OCA2Q04671 838 aa19.53■□□□□ 0.72
RTCA-201ENST00000260563 ZNF763Q0D2J5 394 aa19.53■□□□□ 0.72
RTCA-201ENST00000260563 DNASE1L3Q13609 305 aa19.53■□□□□ 0.72
RTCA-201ENST00000260563 AGKQ53H12 422 aa19.53■□□□□ 0.72
RTCA-201ENST00000260563 MRPL14Q6P1L8 145 aaKnown RBP19.53■□□□□ 0.72
RTCA-201ENST00000260563 OVCH1Q7RTY7 1134 aa19.53■□□□□ 0.72
RTCA-201ENST00000260563 ZCCHC7Q8N3Z6 543 aaKnown RBP19.53■□□□□ 0.72
RTCA-201ENST00000260563 ENDOVQ8N8Q3 282 aaKnown RBP19.53■□□□□ 0.72
RTCA-201ENST00000260563 OR9I1Q8NGQ6 314 aa19.53■□□□□ 0.72
RTCA-201ENST00000260563 OR51Q1Q8NH59 317 aa19.53■□□□□ 0.72
RTCA-201ENST00000260563 CLHC1Q8NHS4 586 aa19.53■□□□□ 0.72
RTCA-201ENST00000260563 DPY30Q9C005 99 aa19.53■□□□□ 0.72
RTCA-201ENST00000260563 ACTL8Q9H568 366 aa19.53■□□□□ 0.72
RTCA-201ENST00000260563 DDX31Q9H8H2 851 aaKnown RBP19.53■□□□□ 0.72
RTCA-201ENST00000260563 CCDC167Q9P0B6 97 aa19.53■□□□□ 0.72
RTCA-201ENST00000260563 PADI2Q9Y2J8 665 aa19.53■□□□□ 0.72
RTCA-201ENST00000260563 CAPNS1P04632 268 aa19.52■□□□□ 0.72
RTCA-201ENST00000260563 CD63P08962 238 aa19.52■□□□□ 0.72
RTCA-201ENST00000260563 RAB40ALP0C0E4 278 aa19.52■□□□□ 0.72
RTCA-201ENST00000260563 JAK1P23458 1154 aa19.52■□□□□ 0.72
RTCA-201ENST00000260563 XCR1P46094 333 aa19.52■□□□□ 0.72
RTCA-201ENST00000260563 RPS15P62841 145 aaKnown RBP19.52■□□□□ 0.72
RTCA-201ENST00000260563 CA13Q8N1Q1 262 aa19.52■□□□□ 0.72
RTCA-201ENST00000260563 ZCCHC14Q8WYQ9 949 aaKnown RBP19.52■□□□□ 0.72
RTCA-201ENST00000260563 SLC45A3Q96JT2 553 aa19.52■□□□□ 0.72
RTCA-201ENST00000260563 TEX37Q96LM6 180 aa19.52■□□□□ 0.72
RTCA-201ENST00000260563 DPH1Q9BZG8 443 aa19.52■□□□□ 0.72
RTCA-201ENST00000260563 SLC26A1Q9H2B4 701 aa19.52■□□□□ 0.72
RTCA-201ENST00000260563 GPN2Q9H9Y4 310 aaPredicted RBP19.52■□□□□ 0.72
RTCA-201ENST00000260563 ARL8BQ9NVJ2 186 aa19.52■□□□□ 0.72
RTCA-201ENST00000260563 C14orf105Q9NVL8 296 aa19.52■□□□□ 0.72
RTCA-201ENST00000260563 TMEM45AQ9NWC5 275 aa19.52■□□□□ 0.72
RTCA-201ENST00000260563 KCND3Q9UK17 655 aa19.52■□□□□ 0.72
RTCA-201ENST00000260563 ZFHX4Q86UP3 3567 aa19.52■□□□□ 0.72
RTCA-201ENST00000260563 A0A0A6YYD5 115 aa19.51■□□□□ 0.71
RTCA-201ENST00000260563 TMEM8BA6NDV4 472 aa19.51■□□□□ 0.71
RTCA-201ENST00000260563 CHST10O43529 356 aa19.51■□□□□ 0.71
RTCA-201ENST00000260563 CD1EP15812 388 aa19.51■□□□□ 0.71
RTCA-201ENST00000260563 ASMTP46597 345 aa19.51■□□□□ 0.71
RTCA-201ENST00000260563 CLDN8P56748 225 aa19.51■□□□□ 0.71
RTCA-201ENST00000260563 MAPRE2Q15555 327 aa19.51■□□□□ 0.71
RTCA-201ENST00000260563 GK5Q6ZS86 529 aa19.51■□□□□ 0.71
RTCA-201ENST00000260563 FUNDC1Q8IVP5 155 aa19.51■□□□□ 0.71
RTCA-201ENST00000260563 CDC26Q8NHZ8 85 aa19.51■□□□□ 0.71
RTCA-201ENST00000260563 ADAMTS18Q8TE60 1221 aa19.51■□□□□ 0.71
RTCA-201ENST00000260563 MIEF2Q96C03 454 aa19.51■□□□□ 0.71
RTCA-201ENST00000260563 CMTM5Q96DZ9 223 aa19.51■□□□□ 0.71
RTCA-201ENST00000260563 PEX11GQ96HA9 241 aa19.51■□□□□ 0.71
RTCA-201ENST00000260563 EGLN2Q96KS0 407 aa19.51■□□□□ 0.71
RTCA-201ENST00000260563 EFHD1Q9BUP0 239 aa19.51■□□□□ 0.71
RTCA-201ENST00000260563 GPR87Q9BY21 358 aa19.51■□□□□ 0.71
RTCA-201ENST00000260563 FAM117AQ9C073 453 aa19.51■□□□□ 0.71
RTCA-201ENST00000260563 WDR54Q9H977 334 aa19.51■□□□□ 0.71
RTCA-201ENST00000260563 NXT1Q9UKK6 140 aaKnown RBP19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms