RNA–Protein interactions for RNA: ENST00000258607.9

CKAP2-201, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CKAP2, Length 3,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-201ENST00000258607 REEP4Q9H6H4 257 aa8.66□□□□□ -1.02
CKAP2-201ENST00000258607 POLE4Q9NR33 117 aa8.66□□□□□ -1.02
CKAP2-201ENST00000258607 SOHLH2Q9NX45 425 aa8.66□□□□□ -1.02
CKAP2-201ENST00000258607 KCMF1Q9P0J7 381 aa8.66□□□□□ -1.02
CKAP2-201ENST00000258607 SLC9A8Q9Y2E8 581 aa8.66□□□□□ -1.02
CKAP2-201ENST00000258607 KCNE3Q9Y6H6 103 aa8.66□□□□□ -1.02
CKAP2-201ENST00000258607 DNMT3AQ9Y6K1 912 aaPredicted RBP8.66□□□□□ -1.02
CKAP2-201ENST00000258607 LIN7AO14910 233 aaPredicted RBP8.66□□□□□ -1.02
CKAP2-201ENST00000258607 PFDN1O60925 122 aa8.66□□□□□ -1.02
CKAP2-201ENST00000258607 ATE1O95260 518 aa8.66□□□□□ -1.02
CKAP2-201ENST00000258607 FCARP24071 287 aa8.66□□□□□ -1.02
CKAP2-201ENST00000258607 MC3RP41968 323 aa8.66□□□□□ -1.02
CKAP2-201ENST00000258607 ATP4BP51164 291 aa8.66□□□□□ -1.02
CKAP2-201ENST00000258607 CCR8P51685 355 aa8.66□□□□□ -1.02
CKAP2-201ENST00000258607 ADPRHP54922 357 aa8.66□□□□□ -1.02
CKAP2-201ENST00000258607 NR1H2P55055 460 aa8.66□□□□□ -1.02
CKAP2-201ENST00000258607 WNT3P56703 355 aa8.66□□□□□ -1.02
CKAP2-201ENST00000258607 MED22Q15528 200 aa8.66□□□□□ -1.02
CKAP2-201ENST00000258607 ATP6AP1Q15904 470 aa8.66□□□□□ -1.02
CKAP2-201ENST00000258607 COL13A1Q5TAT6 717 aaPredicted RBP8.66□□□□□ -1.02
CKAP2-201ENST00000258607 Q6ZSR6 202 aa8.66□□□□□ -1.02
CKAP2-201ENST00000258607 ZFP41Q8N8Y5 198 aa8.66□□□□□ -1.02
CKAP2-201ENST00000258607 OR2L2Q8NH16 312 aa8.66□□□□□ -1.02
CKAP2-201ENST00000258607 SEZ6LQ9BYH1 1024 aa8.66□□□□□ -1.02
CKAP2-201ENST00000258607 FAM118AQ9NWS6 357 aa8.66□□□□□ -1.02
CKAP2-201ENST00000258607 DUSP12Q9UNI6 340 aa8.66□□□□□ -1.02
CKAP2-201ENST00000258607 LOC105369274A0A096LPK9 316 aa8.65□□□□□ -1.02
CKAP2-201ENST00000258607 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa8.65□□□□□ -1.02
CKAP2-201ENST00000258607 LOC102723532A0A0G2JNH3 316 aa8.65□□□□□ -1.02
CKAP2-201ENST00000258607 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.65□□□□□ -1.02
CKAP2-201ENST00000258607 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.65□□□□□ -1.02
CKAP2-201ENST00000258607 K7EQS6 105 aa8.65□□□□□ -1.02
CKAP2-201ENST00000258607 SRPRAP08240 638 aaKnown RBP8.65□□□□□ -1.02
CKAP2-201ENST00000258607 MATN1P21941 496 aa8.65□□□□□ -1.02
CKAP2-201ENST00000258607 CCT3P49368 545 aaKnown RBP8.65□□□□□ -1.02
CKAP2-201ENST00000258607 MAZP56270 477 aaKnown RBP8.65□□□□□ -1.02
CKAP2-201ENST00000258607 SLC35F1Q5T1Q4 408 aa8.65□□□□□ -1.02
CKAP2-201ENST00000258607 GCNT6Q5T4J0 391 aa8.65□□□□□ -1.02
CKAP2-201ENST00000258607 NKAIN2Q5VXU1 208 aa8.65□□□□□ -1.02
CKAP2-201ENST00000258607 GRHL2Q6ISB3 625 aa8.65□□□□□ -1.02
CKAP2-201ENST00000258607 RRM2BQ7LG56 351 aa8.65□□□□□ -1.02
CKAP2-201ENST00000258607 PTOV1Q86YD1 416 aa8.65□□□□□ -1.02
CKAP2-201ENST00000258607 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.65□□□□□ -1.02
CKAP2-201ENST00000258607 OR4N4Q8N0Y3 316 aa8.65□□□□□ -1.02
CKAP2-201ENST00000258607 WFIKKN2Q8TEU8 576 aa8.65□□□□□ -1.02
CKAP2-201ENST00000258607 OTUB2Q96DC9 234 aa8.65□□□□□ -1.02
CKAP2-201ENST00000258607 TMEM19Q96HH6 336 aa8.65□□□□□ -1.02
CKAP2-201ENST00000258607 TEFMQ96QE5 360 aaKnown RBP8.65□□□□□ -1.02
CKAP2-201ENST00000258607 APOOQ9BUR5 198 aa8.65□□□□□ -1.02
CKAP2-201ENST00000258607 SLC29A3Q9BZD2 475 aa8.65□□□□□ -1.02
CKAP2-201ENST00000258607 BTBD1Q9H0C5 482 aa8.65□□□□□ -1.02
CKAP2-201ENST00000258607 YY1AP1Q9H869 796 aa8.65□□□□□ -1.02
CKAP2-201ENST00000258607 SEMA3GQ9NS98 782 aa8.65□□□□□ -1.02
CKAP2-201ENST00000258607 HRASLS2Q9NWW9 162 aa8.65□□□□□ -1.02
CKAP2-201ENST00000258607 TOR4AQ9NXH8 423 aa8.65□□□□□ -1.02
CKAP2-201ENST00000258607 TAAR2Q9P1P5 351 aa8.65□□□□□ -1.02
CKAP2-201ENST00000258607 DNAJB9Q9UBS3 223 aa8.65□□□□□ -1.02
CKAP2-201ENST00000258607 RSL24D1Q9UHA3 163 aaKnown RBP8.65□□□□□ -1.02
CKAP2-201ENST00000258607 EXO1Q9UQ84 846 aaKnown RBP8.65□□□□□ -1.02
CKAP2-201ENST00000258607 NCKAP1Q9Y2A7 1128 aa8.65□□□□□ -1.02
CKAP2-201ENST00000258607 DENND4CQ5VZ89 1909 aa8.65□□□□□ -1.02
CKAP2-201ENST00000258607 DOCK7Q96N67 2140 aa8.65□□□□□ -1.02
CKAP2-201ENST00000258607 IGLV3-16A0A075B6K0 115 aa8.65□□□□□ -1.02
CKAP2-201ENST00000258607 KCNE1BA0A087WTH5 132 aa8.65□□□□□ -1.02
CKAP2-201ENST00000258607 PDPK1O15530 556 aa8.65□□□□□ -1.02
CKAP2-201ENST00000258607 TRMUO75648 421 aaKnown RBP8.65□□□□□ -1.02
CKAP2-201ENST00000258607 RASAL1O95294 804 aa8.65□□□□□ -1.02
CKAP2-201ENST00000258607 BMP2P12643 396 aa8.65□□□□□ -1.02
CKAP2-201ENST00000258607 FUT1P19526 365 aa8.65□□□□□ -1.02
CKAP2-201ENST00000258607 PPP2R1BP30154 601 aa8.65□□□□□ -1.02
CKAP2-201ENST00000258607 ATP6V1E1P36543 226 aa8.65□□□□□ -1.02
CKAP2-201ENST00000258607 BCL6P41182 706 aa8.65□□□□□ -1.02
CKAP2-201ENST00000258607 RANBP1P43487 201 aa8.65□□□□□ -1.02
CKAP2-201ENST00000258607 DAPP51397 102 aa8.65□□□□□ -1.02
CKAP2-201ENST00000258607 RAD23AP54725 363 aa8.65□□□□□ -1.02
CKAP2-201ENST00000258607 EPHA5P54756 1037 aa8.65□□□□□ -1.02
CKAP2-201ENST00000258607 GRSF1Q12849 480 aaKnown RBP eCLIP8.65□□□□□ -1.02
CKAP2-201ENST00000258607 EXOSC7Q15024 291 aaKnown RBP8.65□□□□□ -1.02
CKAP2-201ENST00000258607 MINDY4Q4G0A6 757 aa8.65□□□□□ -1.02
CKAP2-201ENST00000258607 KIAA1614Q5VZ46 1190 aa8.65□□□□□ -1.02
CKAP2-201ENST00000258607 LIPJQ5W064 366 aa8.65□□□□□ -1.02
CKAP2-201ENST00000258607 C16orf87Q6PH81 154 aa8.65□□□□□ -1.02
CKAP2-201ENST00000258607 THAP5Q7Z6K1 395 aa8.65□□□□□ -1.02
CKAP2-201ENST00000258607 GPR65Q8IYL9 337 aa8.65□□□□□ -1.02
CKAP2-201ENST00000258607 ADGRF3Q8IZF5 1079 aa8.65□□□□□ -1.02
CKAP2-201ENST00000258607 AQP11Q8NBQ7 271 aa8.65□□□□□ -1.02
CKAP2-201ENST00000258607 SMAP2Q8WU79 429 aaPredicted RBP8.65□□□□□ -1.02
CKAP2-201ENST00000258607 TOE1Q96GM8 510 aaKnown RBP8.65□□□□□ -1.02
CKAP2-201ENST00000258607 MRGPRX1Q96LB2 322 aa8.65□□□□□ -1.02
CKAP2-201ENST00000258607 OR52A5Q9H2C5 316 aa8.65□□□□□ -1.02
CKAP2-201ENST00000258607 DCAF13Q9NV06 445 aaKnown RBP8.65□□□□□ -1.02
CKAP2-201ENST00000258607 GPR83Q9NYM4 423 aa8.65□□□□□ -1.02
CKAP2-201ENST00000258607 HCN3Q9P1Z3 774 aa8.65□□□□□ -1.02
CKAP2-201ENST00000258607 THAP10Q9P2Z0 257 aaPredicted RBP8.65□□□□□ -1.02
CKAP2-201ENST00000258607 MRPS2Q9Y399 296 aaKnown RBP8.65□□□□□ -1.02
CKAP2-201ENST00000258607 CLCA3PQ9Y6N3 262 aa8.65□□□□□ -1.02
CKAP2-201ENST00000258607 CFAP47Q6ZTR5 3102 aa8.65□□□□□ -1.02
CKAP2-201ENST00000258607 C2CD4DB7Z1M9 353 aa8.65□□□□□ -1.03
CKAP2-201ENST00000258607 C4orf51C9J302 202 aa8.65□□□□□ -1.03
CKAP2-201ENST00000258607 HOXC11O43248 304 aaPredicted RBP8.65□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms