RNA–Protein interactions for RNA: ENST00000254810.8

H3F3B-201, Transcript of H3 histone family member 3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene H3F3B, Length 2,705 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-201ENST00000254810 AGTRAPQ6RW13 159 aa12.79□□□□□ -0.36
H3F3B-201ENST00000254810 TPRG1Q6ZUI0 275 aa12.79□□□□□ -0.36
H3F3B-201ENST00000254810 LSRQ86X29 649 aaPredicted RBP12.79□□□□□ -0.36
H3F3B-201ENST00000254810 RASGRP3Q8IV61 690 aa12.79□□□□□ -0.36
H3F3B-201ENST00000254810 HS6ST3Q8IZP7 471 aa12.79□□□□□ -0.36
H3F3B-201ENST00000254810 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.79□□□□□ -0.368e-29■■■□□ 15.9
H3F3B-201ENST00000254810 CREB3L4Q8TEY5 395 aa12.79□□□□□ -0.36
H3F3B-201ENST00000254810 SCRN2Q96FV2 425 aa12.79□□□□□ -0.36
H3F3B-201ENST00000254810 POLR2J2Q9GZM3 115 aaKnown RBP12.79□□□□□ -0.36
H3F3B-201ENST00000254810 STOX2Q9P2F5 926 aaPredicted RBP12.79□□□□□ -0.36
H3F3B-201ENST00000254810 SNX7Q9UNH6 387 aa12.79□□□□□ -0.36
H3F3B-201ENST00000254810 CPNE3O75131 537 aaKnown RBP12.79□□□□□ -0.36
H3F3B-201ENST00000254810 SOCS5O75159 536 aa12.79□□□□□ -0.36
H3F3B-201ENST00000254810 APOL3O95236 402 aa12.79□□□□□ -0.36
H3F3B-201ENST00000254810 GPC1P35052 558 aa12.79□□□□□ -0.36
H3F3B-201ENST00000254810 RPS5P46782 204 aaKnown RBP12.79□□□□□ -0.36
H3F3B-201ENST00000254810 LSM11P83369 360 aaKnown RBP eCLIP12.79□□□□□ -0.365e-9■□□□□ 8.3
H3F3B-201ENST00000254810 LMAN2Q12907 356 aa12.79□□□□□ -0.36
H3F3B-201ENST00000254810 CRB2Q5IJ48 1285 aa12.79□□□□□ -0.36
H3F3B-201ENST00000254810 KRT73Q86Y46 540 aa12.79□□□□□ -0.36
H3F3B-201ENST00000254810 NANOGP1Q8N7R0 232 aa12.79□□□□□ -0.36
H3F3B-201ENST00000254810 GOT1L1Q8NHS2 421 aaPredicted RBP12.79□□□□□ -0.36
H3F3B-201ENST00000254810 UPF1Q92900 1129 aaKnown RBP eCLIP12.79□□□□□ -0.363e-6■■□□□ 12.3
H3F3B-201ENST00000254810 SLC25A46Q96AG3 418 aa12.79□□□□□ -0.36
H3F3B-201ENST00000254810 TMEM80Q96HE8 168 aa12.79□□□□□ -0.36
H3F3B-201ENST00000254810 LYSMD1Q96S90 227 aa12.79□□□□□ -0.36
H3F3B-201ENST00000254810 SLC22A4Q9H015 551 aa12.79□□□□□ -0.36
H3F3B-201ENST00000254810 TXNL4BQ9NX01 149 aaKnown RBP12.79□□□□□ -0.36
H3F3B-201ENST00000254810 SEC14L4Q9UDX3 406 aa12.79□□□□□ -0.36
H3F3B-201ENST00000254810 CARD8Q9Y2G2 431 aa12.79□□□□□ -0.36
H3F3B-201ENST00000254810 PCM1Q15154 2024 aa12.79□□□□□ -0.36
H3F3B-201ENST00000254810 IQCMA0A1B0GVH7 501 aa12.78□□□□□ -0.36
H3F3B-201ENST00000254810 CCDC182A6NF36 153 aa12.78□□□□□ -0.36
H3F3B-201ENST00000254810 SMLR1H3BR10 107 aa12.78□□□□□ -0.36
H3F3B-201ENST00000254810 AKR7A2O43488 359 aa12.78□□□□□ -0.36
H3F3B-201ENST00000254810 AP2A2O94973 939 aa12.78□□□□□ -0.36
H3F3B-201ENST00000254810 SLC16A8O95907 504 aa12.78□□□□□ -0.36
H3F3B-201ENST00000254810 ALPPP05187 535 aa12.78□□□□□ -0.36
H3F3B-201ENST00000254810 GALTP07902 379 aa12.78□□□□□ -0.36
H3F3B-201ENST00000254810 PSMA1P25786 263 aaKnown RBP12.78□□□□□ -0.36
H3F3B-201ENST00000254810 ASMTP46597 345 aa12.78□□□□□ -0.36
H3F3B-201ENST00000254810 AP1S2P56377 157 aa12.78□□□□□ -0.36
H3F3B-201ENST00000254810 SCN1BQ07699 218 aa12.78□□□□□ -0.36
H3F3B-201ENST00000254810 PCDH1Q08174 1060 aa12.78□□□□□ -0.36
H3F3B-201ENST00000254810 TCTN1Q2MV58 587 aa12.78□□□□□ -0.36
H3F3B-201ENST00000254810 SLC35F1Q5T1Q4 408 aa12.78□□□□□ -0.36
H3F3B-201ENST00000254810 RFPL4BQ6ZWI9 263 aa12.78□□□□□ -0.36
H3F3B-201ENST00000254810 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.78□□□□□ -0.36
H3F3B-201ENST00000254810 CAMKK1Q8N5S9 505 aa12.78□□□□□ -0.36
H3F3B-201ENST00000254810 OR9Q1Q8NGQ5 310 aa12.78□□□□□ -0.36
H3F3B-201ENST00000254810 APOBEC4Q8WW27 367 aaKnown RBP12.78□□□□□ -0.36
H3F3B-201ENST00000254810 SOCS4Q8WXH5 440 aa12.78□□□□□ -0.36
H3F3B-201ENST00000254810 NEIL2Q969S2 332 aa12.78□□□□□ -0.36
H3F3B-201ENST00000254810 TSSK6Q9BXA6 273 aa12.78□□□□□ -0.36
H3F3B-201ENST00000254810 VN1R3Q9BXE9 311 aa12.78□□□□□ -0.36
H3F3B-201ENST00000254810 IRF2BPLQ9H1B7 796 aa12.78□□□□□ -0.36
H3F3B-201ENST00000254810 SLA2Q9H6Q3 261 aa12.78□□□□□ -0.36
H3F3B-201ENST00000254810 RC3H2Q9HBD1 1191 aaKnown RBP12.78□□□□□ -0.36
H3F3B-201ENST00000254810 RPRD1BQ9NQG5 326 aaKnown RBP12.78□□□□□ -0.36
H3F3B-201ENST00000254810 NDRG2Q9UN36 371 aaKnown RBP12.78□□□□□ -0.36
H3F3B-201ENST00000254810 OR6C70A6NIJ9 312 aa12.78□□□□□ -0.36
H3F3B-201ENST00000254810 FADS2P1A8MWK0 482 aa12.78□□□□□ -0.36
H3F3B-201ENST00000254810 EIF3FO00303 357 aaPredicted RBP12.78□□□□□ -0.36
H3F3B-201ENST00000254810 UGDHO60701 494 aa12.78□□□□□ -0.36
H3F3B-201ENST00000254810 YES1P07947 543 aa12.78□□□□□ -0.36
H3F3B-201ENST00000254810 IMPA1P29218 277 aa12.78□□□□□ -0.36
H3F3B-201ENST00000254810 SERPINA4P29622 427 aa12.78□□□□□ -0.36
H3F3B-201ENST00000254810 GNG2P59768 71 aa12.78□□□□□ -0.36
H3F3B-201ENST00000254810 ARPC4P59998 168 aa12.78□□□□□ -0.36
H3F3B-201ENST00000254810 FCHO2Q0JRZ9 810 aa12.78□□□□□ -0.36
H3F3B-201ENST00000254810 SP140Q13342 867 aa12.78□□□□□ -0.36
H3F3B-201ENST00000254810 RETSATQ6NUM9 610 aa12.78□□□□□ -0.36
H3F3B-201ENST00000254810 ERAP2Q6P179 960 aa12.78□□□□□ -0.36
H3F3B-201ENST00000254810 COMMD6Q7Z4G1 85 aa12.78□□□□□ -0.36
H3F3B-201ENST00000254810 VWA5B2Q8N398 1253 aa12.78□□□□□ -0.36
H3F3B-201ENST00000254810 TCEANCQ8N8B7 351 aa12.78□□□□□ -0.36
H3F3B-201ENST00000254810 YIPF7Q8N8F6 280 aa12.78□□□□□ -0.36
H3F3B-201ENST00000254810 ARL14EPQ8N8R7 260 aaPredicted RBP12.78□□□□□ -0.36
H3F3B-201ENST00000254810 GPR32P1Q8NGA4 272 aa12.78□□□□□ -0.36
H3F3B-201ENST00000254810 OR4D11Q8NGI4 311 aa12.78□□□□□ -0.36
H3F3B-201ENST00000254810 KLHL6Q8WZ60 621 aa12.78□□□□□ -0.36
H3F3B-201ENST00000254810 DIRAS2Q96HU8 199 aa12.78□□□□□ -0.36
H3F3B-201ENST00000254810 C2orf49Q9BVC5 232 aaPredicted RBP12.78□□□□□ -0.36
H3F3B-201ENST00000254810 SORBS1Q9BX66 1292 aaKnown RBP12.78□□□□□ -0.36
H3F3B-201ENST00000254810 TMEM38AQ9H6F2 299 aa12.78□□□□□ -0.36
H3F3B-201ENST00000254810 REEP4Q9H6H4 257 aa12.78□□□□□ -0.36
H3F3B-201ENST00000254810 RNF121Q9H920 327 aa12.78□□□□□ -0.36
H3F3B-201ENST00000254810 TMEM161AQ9NX61 479 aa12.78□□□□□ -0.36
H3F3B-201ENST00000254810 B4GALT6Q9UBX8 382 aa12.78□□□□□ -0.36
H3F3B-201ENST00000254810 ATP6V1HQ9UI12 483 aa12.78□□□□□ -0.36
H3F3B-201ENST00000254810 KCND3Q9UK17 655 aa12.78□□□□□ -0.36
H3F3B-201ENST00000254810 FABP12A6NFH5 140 aa12.77□□□□□ -0.36
H3F3B-201ENST00000254810 KPNA5O15131 536 aa12.77□□□□□ -0.36
H3F3B-201ENST00000254810 SLC16A5O15375 505 aa12.77□□□□□ -0.36
H3F3B-201ENST00000254810 SEPT4O43236 478 aa12.77□□□□□ -0.36
H3F3B-201ENST00000254810 RPLP2P05387 115 aaKnown RBP12.77□□□□□ -0.36
H3F3B-201ENST00000254810 FURINP09958 794 aa12.77□□□□□ -0.36
H3F3B-201ENST00000254810 TRAPPC2P0DI81 140 aa12.77□□□□□ -0.36
H3F3B-201ENST00000254810 TRAPPC2BP0DI82 140 aa12.77□□□□□ -0.36
H3F3B-201ENST00000254810 RHCEP18577 417 aa12.77□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms