RNA–Protein interactions for RNA: ENST00000254667.7

PTPRE-201, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRE, Length 5,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-201ENST00000254667 BLOC1S3Q6QNY0 202 aa18.21■□□□□ 0.51
PTPRE-201ENST00000254667 GALNT15Q8N3T1 639 aa18.21■□□□□ 0.51
PTPRE-201ENST00000254667 ENDOVQ8N8Q3 282 aaKnown RBP18.21■□□□□ 0.51
PTPRE-201ENST00000254667 TM9SF2Q99805 663 aa18.21■□□□□ 0.51
PTPRE-201ENST00000254667 SLC12A9Q9BXP2 914 aa18.21■□□□□ 0.51
PTPRE-201ENST00000254667 OR51I1Q9H343 314 aa18.21■□□□□ 0.51
PTPRE-201ENST00000254667 CCM2LQ9NUG4 571 aaPredicted RBP18.21■□□□□ 0.51
PTPRE-201ENST00000254667 TM4SF4P48230 202 aa18.2■□□□□ 0.5
PTPRE-201ENST00000254667 HNRNPKP61978 463 aaKnown RBP eCLIP18.2■□□□□ 0.5
PTPRE-201ENST00000254667 EIF5AP63241 154 aaKnown RBP18.2■□□□□ 0.5
PTPRE-201ENST00000254667 ZNF227Q86WZ6 799 aa18.2■□□□□ 0.5
PTPRE-201ENST00000254667 ARMC10Q8N2F6 343 aa18.2■□□□□ 0.5
PTPRE-201ENST00000254667 KRTCAP2Q8N6L1 136 aa18.2■□□□□ 0.5
PTPRE-201ENST00000254667 GPR150Q8NGU9 434 aa18.2■□□□□ 0.5
PTPRE-201ENST00000254667 GFM1Q96RP9 751 aaKnown RBP18.2■□□□□ 0.5
PTPRE-201ENST00000254667 SPATA6Q9NWH7 488 aaPredicted RBP18.2■□□□□ 0.5
PTPRE-201ENST00000254667 OR14I1A6ND48 311 aa18.2■□□□□ 0.5
PTPRE-201ENST00000254667 ZNF860A6NHJ4 632 aa18.2■□□□□ 0.5
PTPRE-201ENST00000254667 HTRA2O43464 458 aaPredicted RBP18.2■□□□□ 0.5
PTPRE-201ENST00000254667 LBX1P52954 281 aa18.2■□□□□ 0.5
PTPRE-201ENST00000254667 DEFB134Q4QY38 66 aa18.2■□□□□ 0.5
PTPRE-201ENST00000254667 OR5M3Q8NGP4 307 aa18.2■□□□□ 0.5
PTPRE-201ENST00000254667 HDAC2Q92769 488 aaKnown RBP18.2■□□□□ 0.5
PTPRE-201ENST00000254667 HS6ST2Q96MM7 605 aa18.2■□□□□ 0.5
PTPRE-201ENST00000254667 LDAHQ9H6V9 325 aa18.2■□□□□ 0.5
PTPRE-201ENST00000254667 BRD7Q9NPI1 651 aa18.2■□□□□ 0.5
PTPRE-201ENST00000254667 GDE1Q9NZC3 331 aa18.2■□□□□ 0.5
PTPRE-201ENST00000254667 MID1O15344 667 aa18.2■□□□□ 0.5
PTPRE-201ENST00000254667 PGAM2P15259 253 aa18.2■□□□□ 0.5
PTPRE-201ENST00000254667 KDELR2P33947 212 aa18.2■□□□□ 0.5
PTPRE-201ENST00000254667 OR4D1Q15615 310 aa18.2■□□□□ 0.5
PTPRE-201ENST00000254667 LRIF1Q5T3J3 769 aa18.2■□□□□ 0.5
PTPRE-201ENST00000254667 OR4C11Q6IEV9 310 aa18.2■□□□□ 0.5
PTPRE-201ENST00000254667 GALNT12Q8IXK2 581 aa18.2■□□□□ 0.5
PTPRE-201ENST00000254667 ZNF101Q8IZC7 436 aa18.2■□□□□ 0.5
PTPRE-201ENST00000254667 GAL3ST1Q99999 423 aa18.2■□□□□ 0.5
PTPRE-201ENST00000254667 LAMTOR5O43504 91 aa18.2■□□□□ 0.5
PTPRE-201ENST00000254667 CSTAP01040 98 aa18.2■□□□□ 0.5
PTPRE-201ENST00000254667 IVDP26440 423 aa18.2■□□□□ 0.5
PTPRE-201ENST00000254667 SLC3A1Q07837 685 aa18.2■□□□□ 0.5
PTPRE-201ENST00000254667 MPP2Q14168 576 aa18.2■□□□□ 0.5
PTPRE-201ENST00000254667 MPP7Q5T2T1 576 aa18.2■□□□□ 0.5
PTPRE-201ENST00000254667 TREML1Q86YW5 311 aa18.2■□□□□ 0.5
PTPRE-201ENST00000254667 CPXM2Q8N436 756 aa18.2■□□□□ 0.5
PTPRE-201ENST00000254667 TCEANCQ8N8B7 351 aa18.2■□□□□ 0.5
PTPRE-201ENST00000254667 PSD4Q8NDX1 1056 aa18.2■□□□□ 0.5
PTPRE-201ENST00000254667 FBXL8Q96CD0 374 aa18.2■□□□□ 0.5
PTPRE-201ENST00000254667 FAM129BQ96TA1 746 aa18.2■□□□□ 0.5
PTPRE-201ENST00000254667 PELI2Q9HAT8 420 aa18.2■□□□□ 0.5
PTPRE-201ENST00000254667 ASB6Q9NWX5 421 aa18.2■□□□□ 0.5
PTPRE-201ENST00000254667 ZNF432O94892 652 aa18.19■□□□□ 0.5
PTPRE-201ENST00000254667 PRKACGP22612 351 aa18.19■□□□□ 0.5
PTPRE-201ENST00000254667 METTL2BQ6P1Q9 378 aaKnown RBP18.19■□□□□ 0.5
PTPRE-201ENST00000254667 RNF111Q6ZNA4 994 aa18.19■□□□□ 0.5
PTPRE-201ENST00000254667 PLCZ1Q86YW0 608 aa18.19■□□□□ 0.5
PTPRE-201ENST00000254667 IQCF2Q8IXL9 164 aa18.19■□□□□ 0.5
PTPRE-201ENST00000254667 OR10Q1Q8NGQ4 319 aa18.19■□□□□ 0.5
PTPRE-201ENST00000254667 POLDIP3Q9BY77 421 aaKnown RBP18.19■□□□□ 0.5
PTPRE-201ENST00000254667 TTYH1Q9H313 450 aaPredicted RBP18.19■□□□□ 0.5
PTPRE-201ENST00000254667 LAMP5Q9UJQ1 280 aa18.19■□□□□ 0.5
PTPRE-201ENST00000254667 GNG8Q9UK08 70 aa18.19■□□□□ 0.5
PTPRE-201ENST00000254667 ZFR2Q9UPR6 939 aaKnown RBP18.19■□□□□ 0.5
PTPRE-201ENST00000254667 A0A1B0GVI7 797 aa18.19■□□□□ 0.5
PTPRE-201ENST00000254667 CHP2O43745 196 aa18.19■□□□□ 0.5
PTPRE-201ENST00000254667 GPR143P51810 404 aa18.19■□□□□ 0.5
PTPRE-201ENST00000254667 GBX1Q14549 363 aa18.19■□□□□ 0.5
PTPRE-201ENST00000254667 TOMM5Q8N4H5 51 aa18.19■□□□□ 0.5
PTPRE-201ENST00000254667 HUS1BQ8NHY5 278 aa18.19■□□□□ 0.5
PTPRE-201ENST00000254667 F2RL3Q96RI0 385 aa18.19■□□□□ 0.5
PTPRE-201ENST00000254667 TMED9Q9BVK6 235 aa18.19■□□□□ 0.5
PTPRE-201ENST00000254667 MOV10Q9HCE1 1003 aaKnown RBP18.19■□□□□ 0.5
PTPRE-201ENST00000254667 ZCWPW2A0A1B0GU75 182 aa18.19■□□□□ 0.5
PTPRE-201ENST00000254667 SOX1O00570 391 aaPredicted RBP18.19■□□□□ 0.5
PTPRE-201ENST00000254667 RNF13O43567 381 aa18.19■□□□□ 0.5
PTPRE-201ENST00000254667 RCAN2Q14206 197 aa18.19■□□□□ 0.5
PTPRE-201ENST00000254667 MEP1AQ16819 746 aa18.19■□□□□ 0.5
PTPRE-201ENST00000254667 EMC10Q5UCC4 262 aa18.19■□□□□ 0.5
PTPRE-201ENST00000254667 ZNF440Q8IYI8 595 aa18.19■□□□□ 0.5
PTPRE-201ENST00000254667 IL17FQ96PD4 163 aa18.19■□□□□ 0.5
PTPRE-201ENST00000254667 MAGIXQ9H6Y5 334 aa18.19■□□□□ 0.5
PTPRE-201ENST00000254667 DCDC1P59894 354 aa18.19■□□□□ 0.5
PTPRE-201ENST00000254667 GINS1Q14691 196 aa18.19■□□□□ 0.5
PTPRE-201ENST00000254667 SLC14A2Q15849 920 aa18.19■□□□□ 0.5
PTPRE-201ENST00000254667 SLC27A4Q6P1M0 643 aa18.19■□□□□ 0.5
PTPRE-201ENST00000254667 PGBD2Q6P3X8 592 aa18.19■□□□□ 0.5
PTPRE-201ENST00000254667 TMEM203Q969S6 136 aa18.19■□□□□ 0.5
PTPRE-201ENST00000254667 ISG20Q96AZ6 181 aaKnown RBP18.19■□□□□ 0.5
PTPRE-201ENST00000254667 DEFB126Q9BYW3 111 aa18.19■□□□□ 0.5
PTPRE-201ENST00000254667 TMEM45AQ9NWC5 275 aa18.19■□□□□ 0.5
PTPRE-201ENST00000254667 PLCL2Q9UPR0 1127 aa18.19■□□□□ 0.5
PTPRE-201ENST00000254667 RGPD1P0DJD0 1748 aa18.19■□□□□ 0.5
PTPRE-201ENST00000254667 SH3PXD2BA1X283 911 aa18.19■□□□□ 0.5
PTPRE-201ENST00000254667 DRGXA6NNA5 263 aa18.19■□□□□ 0.5
PTPRE-201ENST00000254667 SCAMP2O15127 329 aaKnown RBP18.19■□□□□ 0.5
PTPRE-201ENST00000254667 TPD52L2O43399 206 aaKnown RBP18.19■□□□□ 0.5
PTPRE-201ENST00000254667 SEMA4FO95754 770 aa18.19■□□□□ 0.5
PTPRE-201ENST00000254667 ITGB1P05556 798 aa18.19■□□□□ 0.5
PTPRE-201ENST00000254667 GJA5P36382 358 aa18.19■□□□□ 0.5
PTPRE-201ENST00000254667 FIP1L1Q6UN15 594 aaKnown RBP18.19■□□□□ 0.5
PTPRE-201ENST00000254667 FKBP10Q96AY3 582 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms