RNA–Protein interactions for RNA: ENST00000254480.9

SMARCC1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCC1, Length 6,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-201ENST00000254480 SLC2A13Q96QE2 648 aa17.96■□□□□ 0.47
SMARCC1-201ENST00000254480 PSKH2Q96QS6 385 aa17.96■□□□□ 0.47
SMARCC1-201ENST00000254480 ZBTB20Q9HC78 741 aaPredicted RBP17.96■□□□□ 0.47
SMARCC1-201ENST00000254480 SRA1Q9HD15 236 aaKnown RBP17.96■□□□□ 0.47
SMARCC1-201ENST00000254480 C6P13671 934 aa17.95■□□□□ 0.46
SMARCC1-201ENST00000254480 SLC6A6P31641 620 aa17.95■□□□□ 0.46
SMARCC1-201ENST00000254480 PXNP49023 591 aaPredicted RBP17.95■□□□□ 0.46
SMARCC1-201ENST00000254480 PUM2Q8TB72 1066 aaKnown RBP eCLIP17.95■□□□□ 0.462e-6■■■■□ 25.7
SMARCC1-201ENST00000254480 IL20RAQ9UHF4 553 aa17.95■□□□□ 0.46
SMARCC1-201ENST00000254480 HCN4Q9Y3Q4 1203 aa17.95■□□□□ 0.46
SMARCC1-201ENST00000254480 RICTORQ6R327 1708 aa17.95■□□□□ 0.46
SMARCC1-201ENST00000254480 A0A1B0GVI7 797 aa17.95■□□□□ 0.46
SMARCC1-201ENST00000254480 SOCS5O75159 536 aa17.95■□□□□ 0.46
SMARCC1-201ENST00000254480 LHCGRP22888 699 aa17.95■□□□□ 0.46
SMARCC1-201ENST00000254480 FAM189BP81408 668 aa17.95■□□□□ 0.46
SMARCC1-201ENST00000254480 HNRNPA0Q13151 305 aaKnown RBP17.95■□□□□ 0.46
SMARCC1-201ENST00000254480 MYO9BQ13459 2157 aa17.95■□□□□ 0.46
SMARCC1-201ENST00000254480 EXOC3L2Q2M3D2 409 aa17.95■□□□□ 0.46
SMARCC1-201ENST00000254480 ZBED5Q49AG3 693 aa17.95■□□□□ 0.46
SMARCC1-201ENST00000254480 OGFRL1Q5TC84 451 aaPredicted RBP17.95■□□□□ 0.46
SMARCC1-201ENST00000254480 SLC36A4Q6YBV0 504 aa17.95■□□□□ 0.46
SMARCC1-201ENST00000254480 IL22RA1Q8N6P7 574 aa17.95■□□□□ 0.46
SMARCC1-201ENST00000254480 WDR92Q96MX6 357 aa17.95■□□□□ 0.46
SMARCC1-201ENST00000254480 GMLQ99445 158 aa17.95■□□□□ 0.46
SMARCC1-201ENST00000254480 ACTL8Q9H568 366 aa17.95■□□□□ 0.46
SMARCC1-201ENST00000254480 PTGES2Q9H7Z7 377 aa17.95■□□□□ 0.46
SMARCC1-201ENST00000254480 TM9SF3Q9HD45 589 aa17.95■□□□□ 0.46
SMARCC1-201ENST00000254480 OARD1Q9Y530 152 aa17.95■□□□□ 0.46
SMARCC1-201ENST00000254480 ZNF821O75541 412 aaPredicted RBP17.95■□□□□ 0.46
SMARCC1-201ENST00000254480 BCAS2O75934 225 aaPredicted RBP17.95■□□□□ 0.46
SMARCC1-201ENST00000254480 UQCRC2P22695 453 aa17.95■□□□□ 0.46
SMARCC1-201ENST00000254480 ENTPD1P49961 510 aa17.95■□□□□ 0.46
SMARCC1-201ENST00000254480 GAS6Q14393 721 aa17.95■□□□□ 0.46
SMARCC1-201ENST00000254480 POGLUT1Q8NBL1 392 aa17.95■□□□□ 0.46
SMARCC1-201ENST00000254480 ACSL5Q9ULC5 683 aa17.95■□□□□ 0.46
SMARCC1-201ENST00000254480 NOP16Q9Y3C1 178 aaKnown RBP17.95■□□□□ 0.46
SMARCC1-201ENST00000254480 PCDHB3Q9Y5E6 796 aa17.95■□□□□ 0.46
SMARCC1-201ENST00000254480 ZNF227Q86WZ6 799 aa17.95■□□□□ 0.46
SMARCC1-201ENST00000254480 NATD1Q8N6N6 113 aa17.95■□□□□ 0.46
SMARCC1-201ENST00000254480 C9orf43Q8TAL5 461 aaPredicted RBP17.95■□□□□ 0.46
SMARCC1-201ENST00000254480 MUS81Q96NY9 551 aa17.95■□□□□ 0.46
SMARCC1-201ENST00000254480 RNF6Q9Y252 685 aa17.95■□□□□ 0.46
SMARCC1-201ENST00000254480 C8BP07358 591 aa17.95■□□□□ 0.46
SMARCC1-201ENST00000254480 SLC35E2BP0CK96 405 aa17.95■□□□□ 0.46
SMARCC1-201ENST00000254480 TMEM17Q86X19 198 aa17.95■□□□□ 0.46
SMARCC1-201ENST00000254480 PDSS2Q86YH6 399 aa17.95■□□□□ 0.46
SMARCC1-201ENST00000254480 INO80EQ8NBZ0 244 aaPredicted RBP17.95■□□□□ 0.46
SMARCC1-201ENST00000254480 C19orf25Q9UFG5 118 aaPredicted RBP17.95■□□□□ 0.46
SMARCC1-201ENST00000254480 SDHDO14521 159 aa17.94■□□□□ 0.46
SMARCC1-201ENST00000254480 ARF3P61204 181 aaPredicted RBP17.94■□□□□ 0.46
SMARCC1-201ENST00000254480 ARF1P84077 181 aaKnown RBP17.94■□□□□ 0.46
SMARCC1-201ENST00000254480 LIPKQ5VXJ0 399 aa17.94■□□□□ 0.46
SMARCC1-201ENST00000254480 TRAM1L1Q8N609 369 aa17.94■□□□□ 0.46
SMARCC1-201ENST00000254480 ANKRD26Q9UPS8 1709 aa17.94■□□□□ 0.46
SMARCC1-201ENST00000254480 TEX13DA0A0J9YY54 714 aaPredicted RBP17.94■□□□□ 0.46
SMARCC1-201ENST00000254480 DOC2AQ14183 400 aa17.94■□□□□ 0.46
SMARCC1-201ENST00000254480 TRAM2Q15035 370 aa17.94■□□□□ 0.46
SMARCC1-201ENST00000254480 LHFPL3Q86UP9 236 aa17.94■□□□□ 0.46
SMARCC1-201ENST00000254480 HSPA12BQ96MM6 686 aa17.94■□□□□ 0.46
SMARCC1-201ENST00000254480 LINC00597Q9H2U6 94 aa17.94■□□□□ 0.46
SMARCC1-201ENST00000254480 EHD1Q9H4M9 534 aa17.94■□□□□ 0.46
SMARCC1-201ENST00000254480 APOBEC3BQ9UH17 382 aaKnown RBP17.94■□□□□ 0.46
SMARCC1-201ENST00000254480 FMN2Q9NZ56 1722 aa17.94■□□□□ 0.46
SMARCC1-201ENST00000254480 KLF11O14901 512 aa17.94■□□□□ 0.46
SMARCC1-201ENST00000254480 ARSJQ5FYB0 599 aaPredicted RBP17.94■□□□□ 0.46
SMARCC1-201ENST00000254480 C1orf220Q5T0J3 134 aa17.94■□□□□ 0.46
SMARCC1-201ENST00000254480 FAM69BQ5VUD6 431 aa17.94■□□□□ 0.46
SMARCC1-201ENST00000254480 ST6GALNAC1Q9NSC7 600 aaPredicted RBP17.94■□□□□ 0.46
SMARCC1-201ENST00000254480 CELP19835 753 aa17.94■□□□□ 0.46
SMARCC1-201ENST00000254480 LEPRP48357 1165 aaKnown RBP17.94■□□□□ 0.46
SMARCC1-201ENST00000254480 RPL26P61254 145 aaKnown RBP17.94■□□□□ 0.46
SMARCC1-201ENST00000254480 LRRC37A5PQ49AS3 106 aa17.94■□□□□ 0.46
SMARCC1-201ENST00000254480 GTF2IRD2BQ6EKJ0 949 aa17.94■□□□□ 0.46
SMARCC1-201ENST00000254480 GTF2IRD2Q86UP8 949 aa17.94■□□□□ 0.46
SMARCC1-201ENST00000254480 PEX11GQ96HA9 241 aa17.94■□□□□ 0.46
SMARCC1-201ENST00000254480 ZNF382Q96SR6 550 aa17.94■□□□□ 0.46
SMARCC1-201ENST00000254480 MEMO1Q9Y316 297 aa17.94■□□□□ 0.46
SMARCC1-201ENST00000254480 PCDHGB1Q9Y5G3 927 aa17.94■□□□□ 0.46
SMARCC1-201ENST00000254480 DLG5Q8TDM6 1919 aa17.94■□□□□ 0.46
SMARCC1-201ENST00000254480 TYROBPO43914 113 aa17.94■□□□□ 0.46
SMARCC1-201ENST00000254480 BCKDHAP12694 445 aa17.94■□□□□ 0.46
SMARCC1-201ENST00000254480 IL1RNP18510 177 aa17.94■□□□□ 0.46
SMARCC1-201ENST00000254480 TNFRSF1BP20333 461 aa17.94■□□□□ 0.46
SMARCC1-201ENST00000254480 ASB12Q8WXK4 309 aa17.94■□□□□ 0.46
SMARCC1-201ENST00000254480 FOSL2P15408 326 aa17.93■□□□□ 0.46
SMARCC1-201ENST00000254480 HOXA11P31270 313 aaPredicted RBP17.93■□□□□ 0.46
SMARCC1-201ENST00000254480 SIM1P81133 766 aaPredicted RBP17.93■□□□□ 0.46
SMARCC1-201ENST00000254480 GALK2Q01415 458 aa17.93■□□□□ 0.46
SMARCC1-201ENST00000254480 CHRDL2Q6WN34 429 aa17.93■□□□□ 0.46
SMARCC1-201ENST00000254480 MSANTD1Q6ZTZ1 278 aa17.93■□□□□ 0.46
SMARCC1-201ENST00000254480 GNPDA2Q8TDQ7 276 aa17.93■□□□□ 0.46
SMARCC1-201ENST00000254480 C12orf43Q96C57 262 aaKnown RBP17.93■□□□□ 0.46
SMARCC1-201ENST00000254480 PRR11Q96HE9 360 aaPredicted RBP17.93■□□□□ 0.46
SMARCC1-201ENST00000254480 HCFC1R1Q9NWW0 138 aa17.93■□□□□ 0.46
SMARCC1-201ENST00000254480 SSX6Q7RTT6 188 aa17.93■□□□□ 0.46
SMARCC1-201ENST00000254480 ZFP41Q8N8Y5 198 aa17.93■□□□□ 0.46
SMARCC1-201ENST00000254480 OR2L2Q8NH16 312 aa17.93■□□□□ 0.46
SMARCC1-201ENST00000254480 WDR20Q8TBZ3 569 aa17.93■□□□□ 0.46
SMARCC1-201ENST00000254480 ZDHHC12Q96GR4 267 aa17.93■□□□□ 0.46
SMARCC1-201ENST00000254480 RBP7Q96R05 134 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms