RNA–Protein interactions for RNA: ENST00000248948.3

VPREB3-201, Transcript of V-set pre-B cell surrogate light chain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPREB3, Length 610 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPREB3-201ENST00000248948 B3GNT7Q8NFL0 401 aa11.96□□□□□ -0.49
VPREB3-201ENST00000248948 ELP5Q8TE02 316 aa11.96□□□□□ -0.49
VPREB3-201ENST00000248948 HAS2Q92819 552 aa11.96□□□□□ -0.49
VPREB3-201ENST00000248948 ZNF354BQ96LW1 612 aa11.96□□□□□ -0.49
VPREB3-201ENST00000248948 SLC29A3Q9BZD2 475 aa11.96□□□□□ -0.49
VPREB3-201ENST00000248948 CLMPQ9H6B4 373 aa11.96□□□□□ -0.49
VPREB3-201ENST00000248948 DDX31Q9H8H2 851 aaKnown RBP11.96□□□□□ -0.49
VPREB3-201ENST00000248948 BRF2Q9HAW0 419 aa11.96□□□□□ -0.49
VPREB3-201ENST00000248948 KCNK13Q9HB14 408 aa11.96□□□□□ -0.49
VPREB3-201ENST00000248948 LUZP4Q9P127 313 aa11.96□□□□□ -0.49
VPREB3-201ENST00000248948 LGALS13Q9UHV8 139 aa11.96□□□□□ -0.49
VPREB3-201ENST00000248948 GRID1Q9ULK0 1009 aa11.96□□□□□ -0.49
VPREB3-201ENST00000248948 SNX6Q9UNH7 406 aa11.96□□□□□ -0.49
VPREB3-201ENST00000248948 CSAG2Q9Y5P2 127 aa11.96□□□□□ -0.49
VPREB3-201ENST00000248948 RP1L1Q8IWN7 2480 aaPredicted RBP11.95□□□□□ -0.5
VPREB3-201ENST00000248948 A0A0A6YYD5 115 aa11.95□□□□□ -0.5
VPREB3-201ENST00000248948 TRAV17A0A0B4J275 112 aa11.95□□□□□ -0.5
VPREB3-201ENST00000248948 OR5H15A6NDH6 313 aa11.95□□□□□ -0.5
VPREB3-201ENST00000248948 TGFBR3LH3BV60 316 aa11.95□□□□□ -0.5
VPREB3-201ENST00000248948 SAP18O00422 153 aaKnown RBP11.95□□□□□ -0.5
VPREB3-201ENST00000248948 COPEO14579 308 aa11.95□□□□□ -0.5
VPREB3-201ENST00000248948 CTNSO60931 367 aa11.95□□□□□ -0.5
VPREB3-201ENST00000248948 ETHE1O95571 254 aa11.95□□□□□ -0.5
VPREB3-201ENST00000248948 PROCP04070 461 aa11.95□□□□□ -0.5
VPREB3-201ENST00000248948 MYL2P10916 166 aa11.95□□□□□ -0.5
VPREB3-201ENST00000248948 HSD3B1P14060 373 aa11.95□□□□□ -0.5
VPREB3-201ENST00000248948 KRT4P19013 534 aa11.95□□□□□ -0.5
VPREB3-201ENST00000248948 CPN2P22792 545 aa11.95□□□□□ -0.5
VPREB3-201ENST00000248948 HSD3B2P26439 372 aa11.95□□□□□ -0.5
VPREB3-201ENST00000248948 BSGP35613 385 aa11.95□□□□□ -0.5
VPREB3-201ENST00000248948 BUD31P41223 144 aaPredicted RBP11.95□□□□□ -0.5
VPREB3-201ENST00000248948 TNFSF10P50591 281 aa11.95□□□□□ -0.5
VPREB3-201ENST00000248948 CDH13P55290 713 aa11.95□□□□□ -0.5
VPREB3-201ENST00000248948 PKNOX1P55347 436 aa11.95□□□□□ -0.5
VPREB3-201ENST00000248948 IFFO1Q0D2I5 559 aa11.95□□□□□ -0.5
VPREB3-201ENST00000248948 SLAMF1Q13291 335 aa11.95□□□□□ -0.5
VPREB3-201ENST00000248948 INPP5JQ15735 1006 aaPredicted RBP11.95□□□□□ -0.5
VPREB3-201ENST00000248948 MEP1AQ16819 746 aa11.95□□□□□ -0.5
VPREB3-201ENST00000248948 PLEKHN1Q494U1 663 aaPredicted RBP11.95□□□□□ -0.5
VPREB3-201ENST00000248948 UNC50Q53HI1 259 aa11.95□□□□□ -0.5
VPREB3-201ENST00000248948 RPUSD3Q6P087 351 aaKnown RBP11.95□□□□□ -0.5
VPREB3-201ENST00000248948 GPRIN3Q6ZVF9 776 aa11.95□□□□□ -0.5
VPREB3-201ENST00000248948 CYP4X1Q8N118 509 aa11.95□□□□□ -0.5
VPREB3-201ENST00000248948 ARMC10Q8N2F6 343 aa11.95□□□□□ -0.5
VPREB3-201ENST00000248948 GALNT11Q8NCW6 608 aa11.95□□□□□ -0.5
VPREB3-201ENST00000248948 NFAM1Q8NET5 270 aaPredicted RBP11.95□□□□□ -0.5
VPREB3-201ENST00000248948 DNAJB14Q8TBM8 379 aa11.95□□□□□ -0.5
VPREB3-201ENST00000248948 TRPC4APQ8TEL6 797 aa11.95□□□□□ -0.5
VPREB3-201ENST00000248948 APOPT1Q96IL0 206 aa11.95□□□□□ -0.5
VPREB3-201ENST00000248948 CNDP1Q96KN2 507 aa11.95□□□□□ -0.5
VPREB3-201ENST00000248948 MAPKAP1Q9BPZ7 522 aa11.95□□□□□ -0.5
VPREB3-201ENST00000248948 ROPN1BQ9BZX4 212 aaPredicted RBP11.95□□□□□ -0.5
VPREB3-201ENST00000248948 ROPN1Q9HAT0 212 aaPredicted RBP11.95□□□□□ -0.5
VPREB3-201ENST00000248948 ADAM29Q9UKF5 820 aa11.95□□□□□ -0.5
VPREB3-201ENST00000248948 RAB21Q9UL25 225 aa11.95□□□□□ -0.5
VPREB3-201ENST00000248948 A0A1B0GTL3 188 aa11.94□□□□□ -0.5
VPREB3-201ENST00000248948 G3V2L1 256 aa11.94□□□□□ -0.5
VPREB3-201ENST00000248948 PYCARD-AS1I3L0S3 204 aa11.94□□□□□ -0.5
VPREB3-201ENST00000248948 PLIN3O60664 434 aa11.94□□□□□ -0.5
VPREB3-201ENST00000248948 SH3BGRLO75368 114 aa11.94□□□□□ -0.5
VPREB3-201ENST00000248948 MYO1DO94832 1006 aa11.94□□□□□ -0.5
VPREB3-201ENST00000248948 KRT6AP02538 564 aa11.94□□□□□ -0.5
VPREB3-201ENST00000248948 KRT6BP04259 564 aa11.94□□□□□ -0.5
VPREB3-201ENST00000248948 ENO1P06733 434 aaKnown RBP11.94□□□□□ -0.5
VPREB3-201ENST00000248948 NR2F6P10588 404 aa11.94□□□□□ -0.5
VPREB3-201ENST00000248948 KRT6CP48668 564 aa11.94□□□□□ -0.5
VPREB3-201ENST00000248948 CLCN2P51788 898 aa11.94□□□□□ -0.5
VPREB3-201ENST00000248948 NEK2P51955 445 aa11.94□□□□□ -0.5
VPREB3-201ENST00000248948 HNRNPH2P55795 449 aaKnown RBP11.94□□□□□ -0.5
VPREB3-201ENST00000248948 DNAJB13P59910 316 aa11.94□□□□□ -0.5
VPREB3-201ENST00000248948 IGLV3-21P80748 117 aaPredicted RBP11.94□□□□□ -0.5
VPREB3-201ENST00000248948 KCNC4Q03721 635 aa11.94□□□□□ -0.5
VPREB3-201ENST00000248948 SLC18A2Q05940 514 aa11.94□□□□□ -0.5
VPREB3-201ENST00000248948 STX4Q12846 297 aa11.94□□□□□ -0.5
VPREB3-201ENST00000248948 CSTF3Q12996 717 aaKnown RBP11.94□□□□□ -0.5
VPREB3-201ENST00000248948 BIKQ13323 160 aa11.94□□□□□ -0.5
VPREB3-201ENST00000248948 ERCC6LQ2NKX8 1250 aa11.94□□□□□ -0.5
VPREB3-201ENST00000248948 PRR30Q53SZ7 412 aaPredicted RBP11.94□□□□□ -0.5
VPREB3-201ENST00000248948 ACER2Q5QJU3 275 aa11.94□□□□□ -0.5
VPREB3-201ENST00000248948 MRM1Q6IN84 353 aaKnown RBP11.94□□□□□ -0.5
VPREB3-201ENST00000248948 RPS27LQ71UM5 84 aaKnown RBP11.94□□□□□ -0.5
VPREB3-201ENST00000248948 PAGE2Q7Z2X7 111 aa11.94□□□□□ -0.5
VPREB3-201ENST00000248948 GPR180Q86V85 440 aa11.94□□□□□ -0.5
VPREB3-201ENST00000248948 CRLF3Q8IUI8 442 aa11.94□□□□□ -0.5
VPREB3-201ENST00000248948 TMEM132CQ8N3T6 1108 aa11.94□□□□□ -0.5
VPREB3-201ENST00000248948 APCDD1LQ8NCL9 501 aa11.94□□□□□ -0.5
VPREB3-201ENST00000248948 OR14A16Q8NHC5 309 aa11.94□□□□□ -0.5
VPREB3-201ENST00000248948 VMP1Q96GC9 406 aa11.94□□□□□ -0.5
VPREB3-201ENST00000248948 SORBS1Q9BX66 1292 aaKnown RBP11.94□□□□□ -0.5
VPREB3-201ENST00000248948 GSTO2Q9H4Y5 243 aa11.94□□□□□ -0.5
VPREB3-201ENST00000248948 NMRK1Q9NWW6 199 aa11.94□□□□□ -0.5
VPREB3-201ENST00000248948 AHSPQ9NZD4 102 aa11.94□□□□□ -0.5
VPREB3-201ENST00000248948 VTI1BQ9UEU0 232 aa11.94□□□□□ -0.5
VPREB3-201ENST00000248948 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.94□□□□□ -0.5
VPREB3-201ENST00000248948 ZNF225Q9UK10 706 aa11.94□□□□□ -0.5
VPREB3-201ENST00000248948 FBXW2Q9UKT8 454 aa11.94□□□□□ -0.5
VPREB3-201ENST00000248948 PLAAQ9Y263 795 aa11.94□□□□□ -0.5
VPREB3-201ENST00000248948 V9GYY5 206 aaPredicted RBP11.94□□□□□ -0.5
VPREB3-201ENST00000248948 RELNP78509 3460 aa11.94□□□□□ -0.5
VPREB3-201ENST00000248948 LRRK2Q5S007 2527 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms