RNA–Protein interactions for RNA: ENST00000228437.9

PRDM4-201, Transcript of PR/SET domain 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PRDM4, Length 4,210 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM4-201ENST00000228437 CCDC190Q86UF4 302 aa13.93□□□□□ -0.18
PRDM4-201ENST00000228437 BPHLQ86WA6 291 aaPredicted RBP13.93□□□□□ -0.18
PRDM4-201ENST00000228437 CHAC2Q8WUX2 184 aa13.93□□□□□ -0.18
PRDM4-201ENST00000228437 FOXJ1Q92949 421 aa13.93□□□□□ -0.18
PRDM4-201ENST00000228437 HYLS1Q96M11 299 aa13.93□□□□□ -0.18
PRDM4-201ENST00000228437 SAP130Q9H0E3 1048 aa13.93□□□□□ -0.18
PRDM4-201ENST00000228437 TRPM5Q9NZQ8 1165 aa13.93□□□□□ -0.18
PRDM4-201ENST00000228437 HCN3Q9P1Z3 774 aa13.93□□□□□ -0.18
PRDM4-201ENST00000228437 C5AR2Q9P296 337 aa13.93□□□□□ -0.18
PRDM4-201ENST00000228437 CORO2BQ9UQ03 480 aa13.93□□□□□ -0.18
PRDM4-201ENST00000228437 COL2A1P02458 1487 aaPredicted RBP13.93□□□□□ -0.18
PRDM4-201ENST00000228437 POLR1CO15160 346 aaPredicted RBP13.93□□□□□ -0.18
PRDM4-201ENST00000228437 SYPP08247 313 aa13.93□□□□□ -0.18
PRDM4-201ENST00000228437 CSF3P09919 207 aa13.93□□□□□ -0.18
PRDM4-201ENST00000228437 BMP1P13497 986 aa13.93□□□□□ -0.18
PRDM4-201ENST00000228437 HOXB6P17509 224 aaKnown RBP13.93□□□□□ -0.18
PRDM4-201ENST00000228437 TCEA2Q15560 299 aa13.93□□□□□ -0.18
PRDM4-201ENST00000228437 UPP1Q16831 310 aa13.93□□□□□ -0.18
PRDM4-201ENST00000228437 Q5BKY6 102 aa13.93□□□□□ -0.18
PRDM4-201ENST00000228437 COX20Q5RI15 118 aa13.93□□□□□ -0.18
PRDM4-201ENST00000228437 SAXO2Q658L1 398 aa13.93□□□□□ -0.18
PRDM4-201ENST00000228437 RETSATQ6NUM9 610 aa13.93□□□□□ -0.18
PRDM4-201ENST00000228437 PLCZ1Q86YW0 608 aa13.93□□□□□ -0.18
PRDM4-201ENST00000228437 CLP1Q92989 425 aaKnown RBP13.93□□□□□ -0.18
PRDM4-201ENST00000228437 CIDECQ96AQ7 238 aaPredicted RBP13.93□□□□□ -0.18
PRDM4-201ENST00000228437 A0A1W2PRB8 838 aa13.93□□□□□ -0.18
PRDM4-201ENST00000228437 ARHGEF33A8MVX0 844 aa13.93□□□□□ -0.18
PRDM4-201ENST00000228437 IFNA7P01567 189 aa13.93□□□□□ -0.18
PRDM4-201ENST00000228437 KLK1P06870 262 aa13.93□□□□□ -0.18
PRDM4-201ENST00000228437 ZNF250P15622 560 aa13.93□□□□□ -0.18
PRDM4-201ENST00000228437 ARSBP15848 533 aa13.93□□□□□ -0.18
PRDM4-201ENST00000228437 MAPKAPK2P49137 400 aa13.93□□□□□ -0.18
PRDM4-201ENST00000228437 TSPAN5P62079 268 aa13.93□□□□□ -0.18
PRDM4-201ENST00000228437 SMAD3P84022 425 aaKnown RBP13.93□□□□□ -0.18
PRDM4-201ENST00000228437 PURAQ00577 322 aaKnown RBP13.93□□□□□ -0.18
PRDM4-201ENST00000228437 ZNF852Q6ZMS4 543 aa13.93□□□□□ -0.18
PRDM4-201ENST00000228437 TSPAN33Q86UF1 283 aa13.93□□□□□ -0.18
PRDM4-201ENST00000228437 SLC30A8Q8IWU4 369 aa13.93□□□□□ -0.18
PRDM4-201ENST00000228437 DHRS9Q9BPW9 319 aa13.93□□□□□ -0.18
PRDM4-201ENST00000228437 ZNF226Q9NYT6 803 aa13.93□□□□□ -0.18
PRDM4-201ENST00000228437 OARD1Q9Y530 152 aa13.93□□□□□ -0.18
PRDM4-201ENST00000228437 GJB5O95377 273 aa13.92□□□□□ -0.18
PRDM4-201ENST00000228437 RPL34P49207 117 aaKnown RBP13.92□□□□□ -0.18
PRDM4-201ENST00000228437 SELENOWP63302 87 aa13.92□□□□□ -0.18
PRDM4-201ENST00000228437 MAP4K2Q12851 820 aa13.92□□□□□ -0.18
PRDM4-201ENST00000228437 OLIG3Q7RTU3 272 aa13.92□□□□□ -0.18
PRDM4-201ENST00000228437 FGD2Q7Z6J4 655 aa13.92□□□□□ -0.18
PRDM4-201ENST00000228437 MEIOBQ8N635 442 aa13.92□□□□□ -0.18
PRDM4-201ENST00000228437 DNAJB8Q8NHS0 232 aa13.92□□□□□ -0.18
PRDM4-201ENST00000228437 NDUFAF4Q9P032 175 aa13.92□□□□□ -0.18
PRDM4-201ENST00000228437 TRPS1Q9UHF7 1281 aa13.92□□□□□ -0.18
PRDM4-201ENST00000228437 KLK4Q9Y5K2 254 aa13.92□□□□□ -0.18
PRDM4-201ENST00000228437 PROS1P07225 676 aa13.92□□□□□ -0.18
PRDM4-201ENST00000228437 SPAM1P38567 509 aa13.92□□□□□ -0.18
PRDM4-201ENST00000228437 GZMKP49863 264 aa13.92□□□□□ -0.18
PRDM4-201ENST00000228437 TAS2R50P59544 299 aa13.92□□□□□ -0.18
PRDM4-201ENST00000228437 PIN1Q13526 163 aaPredicted RBP13.92□□□□□ -0.18
PRDM4-201ENST00000228437 P2RY14Q15391 338 aa13.92□□□□□ -0.18
PRDM4-201ENST00000228437 IQCHQ86VS3 1027 aa13.92□□□□□ -0.18
PRDM4-201ENST00000228437 HMGB4Q8WW32 186 aa13.92□□□□□ -0.18
PRDM4-201ENST00000228437 REPS1Q96D71 796 aa13.92□□□□□ -0.18
PRDM4-201ENST00000228437 ZBED3Q96IU2 234 aaPredicted RBP13.92□□□□□ -0.18
PRDM4-201ENST00000228437 PIP5K1AQ99755 562 aa13.92□□□□□ -0.18
PRDM4-201ENST00000228437 SNX11Q9Y5W9 270 aa13.92□□□□□ -0.18
PRDM4-201ENST00000228437 H3BSH0 61 aa13.92□□□□□ -0.18
PRDM4-201ENST00000228437 M0R233 179 aa13.92□□□□□ -0.18
PRDM4-201ENST00000228437 PRRG1O14668 218 aa13.92□□□□□ -0.18
PRDM4-201ENST00000228437 CLDN11O75508 207 aa13.92□□□□□ -0.18
PRDM4-201ENST00000228437 TSPAN12O95859 305 aa13.92□□□□□ -0.18
PRDM4-201ENST00000228437 APOC3P02656 99 aa13.92□□□□□ -0.18
PRDM4-201ENST00000228437 CATP04040 527 aaKnown RBP13.92□□□□□ -0.18
PRDM4-201ENST00000228437 H1F0P07305 194 aaKnown RBP13.92□□□□□ -0.18
PRDM4-201ENST00000228437 RPL35P42766 123 aaKnown RBP13.92□□□□□ -0.18
PRDM4-201ENST00000228437 PREPP48147 710 aa13.92□□□□□ -0.18
PRDM4-201ENST00000228437 RPS25P62851 125 aaKnown RBP13.92□□□□□ -0.18
PRDM4-201ENST00000228437 SLC3A1Q07837 685 aa13.92□□□□□ -0.18
PRDM4-201ENST00000228437 NFATC2Q13469 925 aa13.92□□□□□ -0.18
PRDM4-201ENST00000228437 GALEQ14376 348 aa13.92□□□□□ -0.18
PRDM4-201ENST00000228437 ZNF280BQ86YH2 543 aa13.92□□□□□ -0.18
PRDM4-201ENST00000228437 ZNF433Q8N7K0 673 aaPredicted RBP13.92□□□□□ -0.18
PRDM4-201ENST00000228437 GDPD1Q8N9F7 314 aa13.92□□□□□ -0.18
PRDM4-201ENST00000228437 TRPV1Q8NER1 839 aa13.92□□□□□ -0.18
PRDM4-201ENST00000228437 OR2T35Q8NGX2 323 aa13.92□□□□□ -0.18
PRDM4-201ENST00000228437 C1QTNF6Q9BXI9 259 aa13.92□□□□□ -0.18
PRDM4-201ENST00000228437 TMEM138Q9NPI0 162 aa13.92□□□□□ -0.18
PRDM4-201ENST00000228437 FAM120CQ9NX05 1096 aaKnown RBP13.92□□□□□ -0.18
PRDM4-201ENST00000228437 ZNF282Q9UDV7 671 aaPredicted RBP13.92□□□□□ -0.18
PRDM4-201ENST00000228437 MED16Q9Y2X0 877 aa13.92□□□□□ -0.18
PRDM4-201ENST00000228437 C2orf78A6NCI8 922 aa13.91□□□□□ -0.18
PRDM4-201ENST00000228437 CSO75390 466 aaKnown RBP13.91□□□□□ -0.18
PRDM4-201ENST00000228437 CNMDO75829 334 aa13.91□□□□□ -0.18
PRDM4-201ENST00000228437 RFX2P48378 723 aa13.91□□□□□ -0.18
PRDM4-201ENST00000228437 PSPHP78330 225 aa13.91□□□□□ -0.18
PRDM4-201ENST00000228437 ZNF91Q05481 1191 aa13.91□□□□□ -0.18
PRDM4-201ENST00000228437 CBX2Q14781 532 aaPredicted RBP13.91□□□□□ -0.18
PRDM4-201ENST00000228437 KCNA10Q16322 511 aa13.91□□□□□ -0.18
PRDM4-201ENST00000228437 NTRK2Q16620 822 aa13.91□□□□□ -0.18
PRDM4-201ENST00000228437 SLC16A10Q8TF71 515 aa13.91□□□□□ -0.18
PRDM4-201ENST00000228437 SLC38A2Q96QD8 506 aa13.91□□□□□ -0.18
PRDM4-201ENST00000228437 PTPN18Q99952 460 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms