RNA–Protein interactions for RNA: ENST00000225742.13

SMARCD2-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 1 (best) BASIC

Gene SMARCD2, Length 1,800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-201ENST00000225742 HEPACAM2A8MVW5 462 aa20.94■□□□□ 0.94
SMARCD2-201ENST00000225742 FRKP42685 505 aaPredicted RBP20.94■□□□□ 0.94
SMARCD2-201ENST00000225742 CLK1P49759 484 aaKnown RBP20.94■□□□□ 0.94
SMARCD2-201ENST00000225742 TRA2BP62995 288 aaKnown RBP20.94■□□□□ 0.94
SMARCD2-201ENST00000225742 OLR1P78380 273 aa20.94■□□□□ 0.94
SMARCD2-201ENST00000225742 IRF3Q14653 427 aa20.94■□□□□ 0.94
SMARCD2-201ENST00000225742 TIGD6Q17RP2 521 aa20.94■□□□□ 0.94
SMARCD2-201ENST00000225742 TOR1AIP1Q5JTV8 583 aa20.94■□□□□ 0.94
SMARCD2-201ENST00000225742 FAM46CQ5VWP2 391 aa20.94■□□□□ 0.94
SMARCD2-201ENST00000225742 METRNLQ641Q3 311 aa20.94■□□□□ 0.94
SMARCD2-201ENST00000225742 CCDC103Q8IW40 242 aa20.94■□□□□ 0.94
SMARCD2-201ENST00000225742 PSMA8Q8TAA3 256 aa20.94■□□□□ 0.94
SMARCD2-201ENST00000225742 SMG7Q92540 1137 aaKnown RBP20.94■□□□□ 0.94
SMARCD2-201ENST00000225742 BTBD2Q9BX70 525 aa20.94■□□□□ 0.94
SMARCD2-201ENST00000225742 MMP27Q9H306 513 aa20.94■□□□□ 0.94
SMARCD2-201ENST00000225742 CNOT2Q9NZN8 540 aaKnown RBP20.94■□□□□ 0.94
SMARCD2-201ENST00000225742 PLAGL1Q9UM63 463 aa20.94■□□□□ 0.94
SMARCD2-201ENST00000225742 ALPK3Q96L96 1907 aa20.93■□□□□ 0.94
SMARCD2-201ENST00000225742 M0R082 166 aa20.93■□□□□ 0.94
SMARCD2-201ENST00000225742 PCDH17O14917 1159 aa20.93■□□□□ 0.94
SMARCD2-201ENST00000225742 AIREO43918 545 aa20.93■□□□□ 0.94
SMARCD2-201ENST00000225742 P2RY2P41231 377 aa20.93■□□□□ 0.94
SMARCD2-201ENST00000225742 IDH2P48735 452 aaKnown RBP20.93■□□□□ 0.94
SMARCD2-201ENST00000225742 CD97P48960 835 aa20.93■□□□□ 0.94
SMARCD2-201ENST00000225742 MESP2Q0VG99 397 aa20.93■□□□□ 0.94
SMARCD2-201ENST00000225742 CNTN1Q12860 1018 aa20.93■□□□□ 0.94
SMARCD2-201ENST00000225742 CAMK1Q14012 370 aa20.93■□□□□ 0.94
SMARCD2-201ENST00000225742 INAQ16352 499 aa20.93■□□□□ 0.94
SMARCD2-201ENST00000225742 CEACAM20Q6UY09 585 aa20.93■□□□□ 0.94
SMARCD2-201ENST00000225742 USP43Q70EL4 1123 aa20.93■□□□□ 0.94
SMARCD2-201ENST00000225742 SLC46A3Q7Z3Q1 461 aa20.93■□□□□ 0.94
SMARCD2-201ENST00000225742 ADGRF3Q8IZF5 1079 aa20.93■□□□□ 0.94
SMARCD2-201ENST00000225742 STX19Q8N4C7 294 aa20.93■□□□□ 0.94
SMARCD2-201ENST00000225742 TAC3Q9UHF0 121 aa20.93■□□□□ 0.94
SMARCD2-201ENST00000225742 SH3GLB1Q9Y371 365 aa20.93■□□□□ 0.94
SMARCD2-201ENST00000225742 GPR89AB7ZAQ6 455 aa20.92■□□□□ 0.94
SMARCD2-201ENST00000225742 TOR1BO14657 336 aa20.92■□□□□ 0.94
SMARCD2-201ENST00000225742 OXSR1O95747 527 aaPredicted RBP20.92■□□□□ 0.94
SMARCD2-201ENST00000225742 ALOX5P09917 674 aa20.92■□□□□ 0.94
SMARCD2-201ENST00000225742 GPR89BP0CG08 455 aa20.92■□□□□ 0.94
SMARCD2-201ENST00000225742 ALDH4A1P30038 563 aa20.92■□□□□ 0.94
SMARCD2-201ENST00000225742 LIPAP38571 399 aa20.92■□□□□ 0.94
SMARCD2-201ENST00000225742 MANFP55145 182 aaKnown RBP20.92■□□□□ 0.94
SMARCD2-201ENST00000225742 FPGSQ05932 587 aa20.92■□□□□ 0.94
SMARCD2-201ENST00000225742 MLC1Q15049 377 aa20.92■□□□□ 0.94
SMARCD2-201ENST00000225742 PDGFRLQ15198 375 aa20.92■□□□□ 0.94
SMARCD2-201ENST00000225742 COLEC12Q5KU26 742 aa20.92■□□□□ 0.94
SMARCD2-201ENST00000225742 TUBA3EQ6PEY2 450 aa20.92■□□□□ 0.94
SMARCD2-201ENST00000225742 MMAAQ8IVH4 418 aaKnown RBP20.92■□□□□ 0.94
SMARCD2-201ENST00000225742 RAB42Q8N4Z0 105 aa20.92■□□□□ 0.94
SMARCD2-201ENST00000225742 PLA2G15Q8NCC3 412 aa20.92■□□□□ 0.94
SMARCD2-201ENST00000225742 OR9Q2Q8NGE9 314 aa20.92■□□□□ 0.94
SMARCD2-201ENST00000225742 UTP15Q8TED0 518 aaKnown RBP20.92■□□□□ 0.94
SMARCD2-201ENST00000225742 APOBEC4Q8WW27 367 aaKnown RBP20.92■□□□□ 0.94
SMARCD2-201ENST00000225742 RASSF5Q8WWW0 418 aa20.92■□□□□ 0.94
SMARCD2-201ENST00000225742 PROX1Q92786 737 aa20.92■□□□□ 0.94
SMARCD2-201ENST00000225742 RGMAQ96B86 450 aa20.92■□□□□ 0.94
SMARCD2-201ENST00000225742 SORBS1Q9BX66 1292 aaKnown RBP20.92■□□□□ 0.94
SMARCD2-201ENST00000225742 DCSTAMPQ9H295 470 aa20.92■□□□□ 0.94
SMARCD2-201ENST00000225742 LMCD1Q9NZU5 365 aa20.92■□□□□ 0.94
SMARCD2-201ENST00000225742 DAPK2Q9UIK4 370 aa20.92■□□□□ 0.94
SMARCD2-201ENST00000225742 SNX8Q9Y5X2 465 aa20.92■□□□□ 0.94
SMARCD2-201ENST00000225742 ZAR1LA6NP61 321 aa20.92■□□□□ 0.94
SMARCD2-201ENST00000225742 J3KTA2 159 aa20.92■□□□□ 0.94
SMARCD2-201ENST00000225742 TBX6O95947 436 aaPredicted RBP20.92■□□□□ 0.94
SMARCD2-201ENST00000225742 BMP4P12644 408 aa20.92■□□□□ 0.94
SMARCD2-201ENST00000225742 TEAD1P28347 426 aa20.92■□□□□ 0.94
SMARCD2-201ENST00000225742 C21orf33P30042 268 aaPredicted RBP20.92■□□□□ 0.94
SMARCD2-201ENST00000225742 MAGEA8P43361 318 aa20.92■□□□□ 0.94
SMARCD2-201ENST00000225742 CRISP1P54107 249 aa20.92■□□□□ 0.94
SMARCD2-201ENST00000225742 PCBP4P57723 403 aaKnown RBP20.92■□□□□ 0.94
SMARCD2-201ENST00000225742 FAM78AQ5JUQ0 283 aa20.92■□□□□ 0.94
SMARCD2-201ENST00000225742 ZNF367Q7RTV3 350 aa20.92■□□□□ 0.94
SMARCD2-201ENST00000225742 HEATR4Q86WZ0 1026 aa20.92■□□□□ 0.94
SMARCD2-201ENST00000225742 NUDT13Q86X67 352 aa20.92■□□□□ 0.94
SMARCD2-201ENST00000225742 SLC44A2Q8IWA5 706 aaPredicted RBP20.92■□□□□ 0.94
SMARCD2-201ENST00000225742 TAGAPQ8N103 731 aa20.92■□□□□ 0.94
SMARCD2-201ENST00000225742 ZNF675Q8TD23 568 aa20.92■□□□□ 0.94
SMARCD2-201ENST00000225742 ACSS1Q9NUB1 689 aaPredicted RBP20.92■□□□□ 0.94
SMARCD2-201ENST00000225742 ZSCAN32Q9NX65 697 aa20.92■□□□□ 0.94
SMARCD2-201ENST00000225742 OBP2AQ9NY56 170 aa20.92■□□□□ 0.94
SMARCD2-201ENST00000225742 FTSJ1Q9UET6 329 aa20.92■□□□□ 0.94
SMARCD2-201ENST00000225742 LINC01553A4QN01 128 aa20.91■□□□□ 0.94
SMARCD2-201ENST00000225742 KMOO15229 486 aa20.91■□□□□ 0.94
SMARCD2-201ENST00000225742 RECKO95980 971 aa20.91■□□□□ 0.94
SMARCD2-201ENST00000225742 ADAP00813 363 aa20.91■□□□□ 0.94
SMARCD2-201ENST00000225742 RPLP0P05388 317 aaKnown RBP20.91■□□□□ 0.94
SMARCD2-201ENST00000225742 CDH3P22223 829 aa20.91■□□□□ 0.94
SMARCD2-201ENST00000225742 ALDH9A1P49189 494 aa20.91■□□□□ 0.94
SMARCD2-201ENST00000225742 PSMD7P51665 324 aa20.91■□□□□ 0.94
SMARCD2-201ENST00000225742 CDK3Q00526 305 aa20.91■□□□□ 0.94
SMARCD2-201ENST00000225742 RELAQ04206 551 aa20.91■□□□□ 0.94
SMARCD2-201ENST00000225742 TMEM240Q5SV17 173 aa20.91■□□□□ 0.94
SMARCD2-201ENST00000225742 TMEM236Q5W0B7 351 aa20.91■□□□□ 0.94
SMARCD2-201ENST00000225742 ZNF770Q6IQ21 691 aaPredicted RBP20.91■□□□□ 0.94
SMARCD2-201ENST00000225742 PSRC1Q6PGN9 363 aaPredicted RBP20.91■□□□□ 0.94
SMARCD2-201ENST00000225742 HORMAD2Q8N7B1 307 aa20.91■□□□□ 0.94
SMARCD2-201ENST00000225742 ANKRD53Q8N9V6 530 aa20.91■□□□□ 0.94
SMARCD2-201ENST00000225742 AQP11Q8NBQ7 271 aa20.91■□□□□ 0.94
SMARCD2-201ENST00000225742 KBTBD8Q8NFY9 601 aa20.91■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms