RNA–Protein interactions for RNA: ENST00000217402.2

CHMP4B-201, Transcript of charged multivesicular body protein 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4B, Length 1,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4B-201ENST00000217402 NR2F6P10588 404 aa25.7■■□□□ 1.7
CHMP4B-201ENST00000217402 BUD31P41223 144 aaPredicted RBP25.7■■□□□ 1.7
CHMP4B-201ENST00000217402 NME5P56597 212 aa25.7■■□□□ 1.7
CHMP4B-201ENST00000217402 OCA2Q04671 838 aa25.7■■□□□ 1.7
CHMP4B-201ENST00000217402 FKBP10Q96AY3 582 aa25.7■■□□□ 1.7
CHMP4B-201ENST00000217402 MYNNQ9NPC7 610 aa25.7■■□□□ 1.7
CHMP4B-201ENST00000217402 MS4A12Q9NXJ0 267 aa25.7■■□□□ 1.7
CHMP4B-201ENST00000217402 CYR61O00622 381 aa25.69■■□□□ 1.7
CHMP4B-201ENST00000217402 AKAP10O43572 662 aa25.69■■□□□ 1.7
CHMP4B-201ENST00000217402 B4GALT2O60909 372 aa25.69■■□□□ 1.7
CHMP4B-201ENST00000217402 CNOT3O75175 753 aaKnown RBP25.69■■□□□ 1.7
CHMP4B-201ENST00000217402 GUCY1B2O75343 617 aa25.69■■□□□ 1.7
CHMP4B-201ENST00000217402 FHP07954 510 aa25.69■■□□□ 1.7
CHMP4B-201ENST00000217402 TCN2P20062 427 aa25.69■■□□□ 1.7
CHMP4B-201ENST00000217402 STAT5AP42229 794 aa25.69■■□□□ 1.7
CHMP4B-201ENST00000217402 ALDH9A1P49189 494 aa25.69■■□□□ 1.7
CHMP4B-201ENST00000217402 HNRNPFP52597 415 aaKnown RBP25.69■■□□□ 1.7
CHMP4B-201ENST00000217402 MC1RQ01726 317 aa25.69■■□□□ 1.7
CHMP4B-201ENST00000217402 KLC1Q07866 573 aa25.69■■□□□ 1.7
CHMP4B-201ENST00000217402 NCF4Q15080 339 aa25.69■■□□□ 1.7
CHMP4B-201ENST00000217402 MFSD4BQ5TF39 518 aa25.69■■□□□ 1.7
CHMP4B-201ENST00000217402 PARP9Q8IXQ6 854 aa25.69■■□□□ 1.7
CHMP4B-201ENST00000217402 TMEM52Q8NDY8 209 aa25.69■■□□□ 1.7
CHMP4B-201ENST00000217402 STT3BQ8TCJ2 826 aa25.69■■□□□ 1.7
CHMP4B-201ENST00000217402 ADAMTS18Q8TE60 1221 aa25.69■■□□□ 1.7
CHMP4B-201ENST00000217402 UCN3Q969E3 161 aa25.69■■□□□ 1.7
CHMP4B-201ENST00000217402 BMP10O95393 424 aa25.68■■□□□ 1.7
CHMP4B-201ENST00000217402 NCF2P19878 526 aaPredicted RBP25.68■■□□□ 1.7
CHMP4B-201ENST00000217402 C2orf80Q0P641 193 aa25.68■■□□□ 1.7
CHMP4B-201ENST00000217402 TGIF1Q15583 401 aa25.68■■□□□ 1.7
CHMP4B-201ENST00000217402 NKG7Q16617 165 aa25.68■■□□□ 1.7
CHMP4B-201ENST00000217402 MINDY4Q4G0A6 757 aa25.68■■□□□ 1.7
CHMP4B-201ENST00000217402 MRPL14Q6P1L8 145 aaKnown RBP25.68■■□□□ 1.7
CHMP4B-201ENST00000217402 PUM2Q8TB72 1066 aaKnown RBP eCLIP25.68■■□□□ 1.72e-7■■■■□ 26.3
CHMP4B-201ENST00000217402 NKD1Q969G9 470 aa25.68■■□□□ 1.7
CHMP4B-201ENST00000217402 MIEF2Q96C03 454 aa25.68■■□□□ 1.7
CHMP4B-201ENST00000217402 OR1F2PQ96R84 312 aa25.68■■□□□ 1.7
CHMP4B-201ENST00000217402 FAIM2Q9BWQ8 316 aa25.68■■□□□ 1.7
CHMP4B-201ENST00000217402 SOX17Q9H6I2 414 aaPredicted RBP25.68■■□□□ 1.7
CHMP4B-201ENST00000217402 HEY2Q9UBP5 337 aa25.68■■□□□ 1.7
CHMP4B-201ENST00000217402 CROTQ9UKG9 612 aa25.68■■□□□ 1.7
CHMP4B-201ENST00000217402 ANGPTL2Q9UKU9 493 aa25.68■■□□□ 1.7
CHMP4B-201ENST00000217402 TRIM33Q9UPN9 1127 aa25.68■■□□□ 1.7
CHMP4B-201ENST00000217402 CACNA1AO00555 2505 aa25.68■■□□□ 1.7
CHMP4B-201ENST00000217402 IGLV3-12A0A075B6K2 115 aa25.67■■□□□ 1.7
CHMP4B-201ENST00000217402 OR2W5A6NFC9 320 aa25.67■■□□□ 1.7
CHMP4B-201ENST00000217402 ZGLP1P0C6A0 271 aa25.67■■□□□ 1.7
CHMP4B-201ENST00000217402 IDO1P14902 403 aa25.67■■□□□ 1.7
CHMP4B-201ENST00000217402 TLX1P31314 330 aaPredicted RBP25.67■■□□□ 1.7
CHMP4B-201ENST00000217402 ASMTP46597 345 aa25.67■■□□□ 1.7
CHMP4B-201ENST00000217402 RPS6KA2Q15349 733 aa25.67■■□□□ 1.7
CHMP4B-201ENST00000217402 FAM69BQ5VUD6 431 aa25.67■■□□□ 1.7
CHMP4B-201ENST00000217402 FAM71E1Q6IPT2 247 aa25.67■■□□□ 1.7
CHMP4B-201ENST00000217402 PIGWQ7Z7B1 504 aa25.67■■□□□ 1.7
CHMP4B-201ENST00000217402 CLNKQ7Z7G1 428 aa25.67■■□□□ 1.7
CHMP4B-201ENST00000217402 DTX1Q86Y01 620 aa25.67■■□□□ 1.7
CHMP4B-201ENST00000217402 TMEM151BQ8IW70 566 aa25.67■■□□□ 1.7
CHMP4B-201ENST00000217402 IL22RA1Q8N6P7 574 aa25.67■■□□□ 1.7
CHMP4B-201ENST00000217402 ENDOVQ8N8Q3 282 aaKnown RBP25.67■■□□□ 1.7
CHMP4B-201ENST00000217402 RPF2Q9H7B2 306 aaKnown RBP25.67■■□□□ 1.7
CHMP4B-201ENST00000217402 WDR41Q9HAD4 459 aa25.67■■□□□ 1.7
CHMP4B-201ENST00000217402 C5AR2Q9P296 337 aa25.67■■□□□ 1.7
CHMP4B-201ENST00000217402 MRPS33Q9Y291 106 aaKnown RBP25.67■■□□□ 1.7
CHMP4B-201ENST00000217402 GPR45Q9Y5Y3 372 aa25.67■■□□□ 1.7
CHMP4B-201ENST00000217402 AHCTF1Q8WYP5 2266 aa25.67■■□□□ 1.7
CHMP4B-201ENST00000217402 ALBP02768 609 aa25.66■■□□□ 1.7
CHMP4B-201ENST00000217402 LIPCP11150 499 aa25.66■■□□□ 1.7
CHMP4B-201ENST00000217402 GSTM5P46439 218 aa25.66■■□□□ 1.7
CHMP4B-201ENST00000217402 HEPACAMQ14CZ8 416 aa25.66■■□□□ 1.7
CHMP4B-201ENST00000217402 IKBIPQ70UQ0 350 aa25.66■■□□□ 1.7
CHMP4B-201ENST00000217402 KRTCAP2Q8N6L1 136 aa25.66■■□□□ 1.7
CHMP4B-201ENST00000217402 SLC26A1Q9H2B4 701 aa25.66■■□□□ 1.7
CHMP4B-201ENST00000217402 LANCL2Q9NS86 450 aa25.66■■□□□ 1.7
CHMP4B-201ENST00000217402 C14orf105Q9NVL8 296 aa25.66■■□□□ 1.7
CHMP4B-201ENST00000217402 PCDHA9Q9Y5H5 950 aa25.66■■□□□ 1.7
CHMP4B-201ENST00000217402 CEP295Q9C0D2 2601 aa25.66■■□□□ 1.7
CHMP4B-201ENST00000217402 MED19A0JLT2 244 aaPredicted RBP25.66■■□□□ 1.7
CHMP4B-201ENST00000217402 WASHC1A8K0Z3 465 aa25.66■■□□□ 1.7
CHMP4B-201ENST00000217402 JAK1P23458 1154 aa25.66■■□□□ 1.7
CHMP4B-201ENST00000217402 DLSTP36957 453 aa25.66■■□□□ 1.7
CHMP4B-201ENST00000217402 GSTA3Q16772 222 aa25.66■■□□□ 1.7
CHMP4B-201ENST00000217402 LAPTM4BQ86VI4 370 aa25.66■■□□□ 1.7
CHMP4B-201ENST00000217402 BRINP2Q9C0B6 783 aa25.66■■□□□ 1.7
CHMP4B-201ENST00000217402 TGIF2Q9GZN2 237 aa25.66■■□□□ 1.7
CHMP4B-201ENST00000217402 ACTL8Q9H568 366 aa25.66■■□□□ 1.7
CHMP4B-201ENST00000217402 MIEF1Q9NQG6 463 aa25.66■■□□□ 1.7
CHMP4B-201ENST00000217402 COPG1Q9Y678 874 aaKnown RBP25.66■■□□□ 1.7
CHMP4B-201ENST00000217402 LOC101059948A0A1B0GTJ6 334 aa25.65■■□□□ 1.7
CHMP4B-201ENST00000217402 PGRMC2O15173 223 aa25.65■■□□□ 1.7
CHMP4B-201ENST00000217402 IL10P22301 178 aa25.65■■□□□ 1.7
CHMP4B-201ENST00000217402 STX1BP61266 288 aa25.65■■□□□ 1.7
CHMP4B-201ENST00000217402 ANKRD26P1Q6NSI1 321 aa25.65■■□□□ 1.7
CHMP4B-201ENST00000217402 NUDT8Q8WV74 236 aa25.65■■□□□ 1.7
CHMP4B-201ENST00000217402 SPSB2Q99619 263 aa25.65■■□□□ 1.7
CHMP4B-201ENST00000217402 WDR54Q9H977 334 aa25.65■■□□□ 1.7
CHMP4B-201ENST00000217402 MKL2Q9ULH7 1088 aa25.65■■□□□ 1.7
CHMP4B-201ENST00000217402 EXO1Q9UQ84 846 aaKnown RBP25.65■■□□□ 1.7
CHMP4B-201ENST00000217402 C1orf226A1L170 272 aa25.64■■□□□ 1.7
CHMP4B-201ENST00000217402 VSTM2BA6NLU5 285 aa25.64■■□□□ 1.7
CHMP4B-201ENST00000217402 BTG2P78543 158 aa25.64■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms