RNA–Protein interactions for RNA: ENST00000162749.6

TNFRSF1A-201, Transcript of TNF receptor superfamily member 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1A, Length 2,223 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-201ENST00000162749 KLHL35Q6PF15 583 aa18.67■□□□□ 0.58
TNFRSF1A-201ENST00000162749 SERPINA11Q86U17 422 aa18.67■□□□□ 0.58
TNFRSF1A-201ENST00000162749 ADGRG5Q8IZF4 528 aa18.67■□□□□ 0.58
TNFRSF1A-201ENST00000162749 TNIP2Q8NFZ5 429 aa18.67■□□□□ 0.58
TNFRSF1A-201ENST00000162749 PNPT1Q8TCS8 783 aaKnown RBP18.67■□□□□ 0.58
TNFRSF1A-201ENST00000162749 GAB3Q8WWW8 586 aa18.67■□□□□ 0.58
TNFRSF1A-201ENST00000162749 TSC22D3Q99576 134 aa18.67■□□□□ 0.58
TNFRSF1A-201ENST00000162749 LDHAL6BQ9BYZ2 381 aaPredicted RBP18.67■□□□□ 0.58
TNFRSF1A-201ENST00000162749 SLAMF7Q9NQ25 335 aa18.67■□□□□ 0.58
TNFRSF1A-201ENST00000162749 TAS2R9Q9NYW1 312 aa18.67■□□□□ 0.58
TNFRSF1A-201ENST00000162749 ASB4Q9Y574 426 aa18.67■□□□□ 0.58
TNFRSF1A-201ENST00000162749 A0A1B0GTW7 788 aa18.66■□□□□ 0.58
TNFRSF1A-201ENST00000162749 A0A1W2PRB8 838 aa18.66■□□□□ 0.58
TNFRSF1A-201ENST00000162749 SCELO95171 688 aa18.66■□□□□ 0.58
TNFRSF1A-201ENST00000162749 ST6GAL1P15907 406 aa18.66■□□□□ 0.58
TNFRSF1A-201ENST00000162749 PSMA4P25789 261 aaKnown RBP18.66■□□□□ 0.58
TNFRSF1A-201ENST00000162749 BNC1Q01954 994 aa18.66■□□□□ 0.58
TNFRSF1A-201ENST00000162749 BNIP3Q12983 259 aa18.66■□□□□ 0.58
TNFRSF1A-201ENST00000162749 C14orf28Q4W4Y0 310 aa18.66■□□□□ 0.58
TNFRSF1A-201ENST00000162749 TBCELQ5QJ74 424 aa18.66■□□□□ 0.58
TNFRSF1A-201ENST00000162749 CHERPQ8IWX8 916 aaKnown RBP18.66■□□□□ 0.58
TNFRSF1A-201ENST00000162749 MICU2Q8IYU8 434 aa18.66■□□□□ 0.58
TNFRSF1A-201ENST00000162749 SLC25A45Q8N413 288 aa18.66■□□□□ 0.58
TNFRSF1A-201ENST00000162749 UTP15Q8TED0 518 aaKnown RBP18.66■□□□□ 0.58
TNFRSF1A-201ENST00000162749 FIG4Q92562 907 aa18.66■□□□□ 0.58
TNFRSF1A-201ENST00000162749 UCN3Q969E3 161 aa18.66■□□□□ 0.58
TNFRSF1A-201ENST00000162749 THAP11Q96EK4 314 aa18.66■□□□□ 0.58
TNFRSF1A-201ENST00000162749 REXO5Q96IC2 774 aaKnown RBP18.66■□□□□ 0.58
TNFRSF1A-201ENST00000162749 NSMCE2Q96MF7 247 aa18.66■□□□□ 0.58
TNFRSF1A-201ENST00000162749 TRIM4Q9C037 500 aa18.66■□□□□ 0.58
TNFRSF1A-201ENST00000162749 SEMA6CQ9H3T2 930 aa18.66■□□□□ 0.58
TNFRSF1A-201ENST00000162749 H0YGG7 62 aa18.66■□□□□ 0.58
TNFRSF1A-201ENST00000162749 ZNF888P0CJ79 500 aaPredicted RBP18.66■□□□□ 0.58
TNFRSF1A-201ENST00000162749 ARF3P61204 181 aaPredicted RBP18.66■□□□□ 0.58
TNFRSF1A-201ENST00000162749 CSTF1Q05048 431 aaKnown RBP18.66■□□□□ 0.58
TNFRSF1A-201ENST00000162749 TGM3Q08188 693 aa18.66■□□□□ 0.58
TNFRSF1A-201ENST00000162749 GORASP2Q9H8Y8 452 aa18.66■□□□□ 0.58
TNFRSF1A-201ENST00000162749 SLC24A3Q9HC58 644 aa18.66■□□□□ 0.58
TNFRSF1A-201ENST00000162749 ATG4BQ9Y4P1 393 aa18.66■□□□□ 0.58
TNFRSF1A-201ENST00000162749 PRKRAO75569 313 aaKnown RBP18.65■□□□□ 0.58
TNFRSF1A-201ENST00000162749 GPIP06744 558 aa18.65■□□□□ 0.58
TNFRSF1A-201ENST00000162749 PROS1P07225 676 aa18.65■□□□□ 0.58
TNFRSF1A-201ENST00000162749 DRD2P14416 443 aa18.65■□□□□ 0.58
TNFRSF1A-201ENST00000162749 GNSP15586 552 aa18.65■□□□□ 0.58
TNFRSF1A-201ENST00000162749 POLE2P56282 527 aa18.65■□□□□ 0.58
TNFRSF1A-201ENST00000162749 CAMKVQ8NCB2 501 aa18.65■□□□□ 0.58
TNFRSF1A-201ENST00000162749 RERGQ96A58 199 aaPredicted RBP18.65■□□□□ 0.58
TNFRSF1A-201ENST00000162749 FAM60AQ9NP50 221 aa18.65■□□□□ 0.58
TNFRSF1A-201ENST00000162749 TAS2R7Q9NYW3 318 aa18.65■□□□□ 0.58
TNFRSF1A-201ENST00000162749 MYOCOSA0A1B0GUC4 107 aa18.65■□□□□ 0.58
TNFRSF1A-201ENST00000162749 SOCS2O14508 198 aa18.65■□□□□ 0.58
TNFRSF1A-201ENST00000162749 PDPK1O15530 556 aa18.65■□□□□ 0.58
TNFRSF1A-201ENST00000162749 HNRNPRO43390 633 aaKnown RBP18.65■□□□□ 0.58
TNFRSF1A-201ENST00000162749 HCRTR1O43613 425 aa18.65■□□□□ 0.58
TNFRSF1A-201ENST00000162749 PGM3O95394 542 aa18.65■□□□□ 0.58
TNFRSF1A-201ENST00000162749 NTRK1P04629 796 aa18.65■□□□□ 0.58
TNFRSF1A-201ENST00000162749 PABPC4LP0CB38 370 aaKnown RBP18.65■□□□□ 0.58
TNFRSF1A-201ENST00000162749 SMIM10L1P0DMW3 83 aa18.65■□□□□ 0.58
TNFRSF1A-201ENST00000162749 CDH3P22223 829 aa18.65■□□□□ 0.58
TNFRSF1A-201ENST00000162749 FRKP42685 505 aaPredicted RBP18.65■□□□□ 0.58
TNFRSF1A-201ENST00000162749 PCBP4P57723 403 aaKnown RBP18.65■□□□□ 0.58
TNFRSF1A-201ENST00000162749 PLK5Q496M5 336 aa18.65■□□□□ 0.58
TNFRSF1A-201ENST00000162749 PPP4R4Q6NUP7 873 aa18.65■□□□□ 0.58
TNFRSF1A-201ENST00000162749 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.65■□□□□ 0.58
TNFRSF1A-201ENST00000162749 EXOSC8Q96B26 276 aaKnown RBP18.65■□□□□ 0.58
TNFRSF1A-201ENST00000162749 SMIM10Q96HG1 83 aa18.65■□□□□ 0.58
TNFRSF1A-201ENST00000162749 ELF4Q99607 663 aaPredicted RBP18.65■□□□□ 0.58
TNFRSF1A-201ENST00000162749 ZNF696Q9H7X3 374 aa18.65■□□□□ 0.58
TNFRSF1A-201ENST00000162749 IL21RQ9HBE5 538 aa18.65■□□□□ 0.58
TNFRSF1A-201ENST00000162749 AGPAT4Q9NRZ5 378 aa18.65■□□□□ 0.58
TNFRSF1A-201ENST00000162749 EHD3Q9NZN3 535 aa18.65■□□□□ 0.58
TNFRSF1A-201ENST00000162749 PILRBQ9UKJ0 227 aa18.65■□□□□ 0.58
TNFRSF1A-201ENST00000162749 FBXW2Q9UKT8 454 aa18.65■□□□□ 0.58
TNFRSF1A-201ENST00000162749 CCDC88CQ9P219 2028 aa18.65■□□□□ 0.58
TNFRSF1A-201ENST00000162749 A0A1W2PR48 441 aa18.64■□□□□ 0.57
TNFRSF1A-201ENST00000162749 FAM149AA5PLN7 773 aa18.64■□□□□ 0.57
TNFRSF1A-201ENST00000162749 ENO4A6NNW6 628 aa18.64■□□□□ 0.57
TNFRSF1A-201ENST00000162749 CXCR6O00574 342 aa18.64■□□□□ 0.57
TNFRSF1A-201ENST00000162749 GSTA4O15217 222 aa18.64■□□□□ 0.57
TNFRSF1A-201ENST00000162749 GMNNO75496 209 aa18.64■□□□□ 0.57
TNFRSF1A-201ENST00000162749 KCNK5O95279 499 aa18.64■□□□□ 0.57
TNFRSF1A-201ENST00000162749 GIMD1P0DJR0 217 aa18.64■□□□□ 0.57
TNFRSF1A-201ENST00000162749 BTN3A2P78410 334 aa18.64■□□□□ 0.57
TNFRSF1A-201ENST00000162749 SHBQ15464 509 aa18.64■□□□□ 0.57
TNFRSF1A-201ENST00000162749 C6orf132Q5T0Z8 1188 aa18.64■□□□□ 0.57
TNFRSF1A-201ENST00000162749 ZBTB49Q6ZSB9 765 aa18.64■□□□□ 0.57
TNFRSF1A-201ENST00000162749 C11orf74Q86VG3 221 aa18.64■□□□□ 0.57
TNFRSF1A-201ENST00000162749 NATD1Q8N6N6 113 aa18.64■□□□□ 0.57
TNFRSF1A-201ENST00000162749 TRIML2Q8N7C3 387 aa18.64■□□□□ 0.57
TNFRSF1A-201ENST00000162749 ZCCHC10Q8TBK6 192 aa18.64■□□□□ 0.57
TNFRSF1A-201ENST00000162749 SLC35A5Q9BS91 424 aa18.64■□□□□ 0.57
TNFRSF1A-201ENST00000162749 FAIM2Q9BWQ8 316 aa18.64■□□□□ 0.57
TNFRSF1A-201ENST00000162749 GPATCH2Q9NW75 528 aa18.64■□□□□ 0.57
TNFRSF1A-201ENST00000162749 SEC16AO15027 2179 aa18.64■□□□□ 0.57
TNFRSF1A-201ENST00000162749 WASHC1A8K0Z3 465 aa18.64■□□□□ 0.57
TNFRSF1A-201ENST00000162749 EIF2S1P05198 315 aaKnown RBP18.64■□□□□ 0.57
TNFRSF1A-201ENST00000162749 TFAP2AP05549 437 aa18.64■□□□□ 0.57
TNFRSF1A-201ENST00000162749 PPIBP23284 216 aaKnown RBP18.64■□□□□ 0.57
TNFRSF1A-201ENST00000162749 MVDP53602 400 aa18.64■□□□□ 0.57
TNFRSF1A-201ENST00000162749 TXNL4AP83876 142 aaKnown RBP18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms