RNA–Protein interactions for RNA: ENST00000156825.5

MBD3-201, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene MBD3, Length 5,518 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-201ENST00000156825 CTSAP10619 480 aa18.07■□□□□ 0.48
MBD3-201ENST00000156825 EXOC3L2Q2M3D2 409 aa18.07■□□□□ 0.48
MBD3-201ENST00000156825 SLC36A3Q495N2 470 aa18.07■□□□□ 0.48
MBD3-201ENST00000156825 C6orf120Q7Z4R8 191 aa18.07■□□□□ 0.48
MBD3-201ENST00000156825 FOXRED2Q8IWF2 684 aa18.07■□□□□ 0.48
MBD3-201ENST00000156825 FIBINQ8TAL6 211 aa18.07■□□□□ 0.48
MBD3-201ENST00000156825 SUN3Q8TAQ9 357 aa18.07■□□□□ 0.48
MBD3-201ENST00000156825 PTERQ96BW5 349 aa18.07■□□□□ 0.48
MBD3-201ENST00000156825 RANBP9Q96S59 729 aa18.07■□□□□ 0.48
MBD3-201ENST00000156825 MKLN1Q9UL63 735 aa18.07■□□□□ 0.48
MBD3-201ENST00000156825 A0A096LPI6 279 aa18.07■□□□□ 0.48
MBD3-201ENST00000156825 GJB3O75712 270 aa18.07■□□□□ 0.48
MBD3-201ENST00000156825 CSTAP01040 98 aa18.07■□□□□ 0.48
MBD3-201ENST00000156825 ST3GAL4Q11206 333 aa18.07■□□□□ 0.48
MBD3-201ENST00000156825 MRPL10Q7Z7H8 261 aaKnown RBP18.07■□□□□ 0.48
MBD3-201ENST00000156825 ERI1Q8IV48 349 aaKnown RBP18.07■□□□□ 0.48
MBD3-201ENST00000156825 EZH1Q92800 747 aaPredicted RBP18.07■□□□□ 0.48
MBD3-201ENST00000156825 CLCC1Q96S66 551 aa18.07■□□□□ 0.48
MBD3-201ENST00000156825 HCN2Q9UL51 889 aa18.07■□□□□ 0.48
MBD3-201ENST00000156825 C5orf51A6NDU8 294 aa18.07■□□□□ 0.48
MBD3-201ENST00000156825 KCNC1P48547 511 aa18.07■□□□□ 0.48
MBD3-201ENST00000156825 AKR1D1P51857 326 aa18.07■□□□□ 0.48
MBD3-201ENST00000156825 OR2B6P58173 313 aa18.07■□□□□ 0.48
MBD3-201ENST00000156825 CBLBQ13191 982 aa18.07■□□□□ 0.48
MBD3-201ENST00000156825 ZNF800Q2TB10 664 aaPredicted RBP eCLIP18.07■□□□□ 0.48
MBD3-201ENST00000156825 WSCD2Q2TBF2 565 aa18.07■□□□□ 0.48
MBD3-201ENST00000156825 C12orf40Q86WS4 652 aa18.07■□□□□ 0.48
MBD3-201ENST00000156825 SDR16C5Q8N3Y7 309 aa18.07■□□□□ 0.48
MBD3-201ENST00000156825 PAK6Q9NQU5 681 aaPredicted RBP18.07■□□□□ 0.48
MBD3-201ENST00000156825 RNF6Q9Y252 685 aa18.07■□□□□ 0.48
MBD3-201ENST00000156825 ADRB3P13945 408 aa18.07■□□□□ 0.48
MBD3-201ENST00000156825 FAM214AQ32MH5 1076 aa18.07■□□□□ 0.48
MBD3-201ENST00000156825 OR5P2Q8WZ92 322 aa18.07■□□□□ 0.48
MBD3-201ENST00000156825 WACQ9BTA9 647 aa18.07■□□□□ 0.48
MBD3-201ENST00000156825 ASPNQ9BXN1 380 aa18.07■□□□□ 0.48
MBD3-201ENST00000156825 SARDHQ9UL12 918 aa18.07■□□□□ 0.48
MBD3-201ENST00000156825 ATXN7L1Q9ULK2 861 aaPredicted RBP18.07■□□□□ 0.48
MBD3-201ENST00000156825 GPR34Q9UPC5 381 aa18.07■□□□□ 0.48
MBD3-201ENST00000156825 SORBS2O94875 1100 aaKnown RBP18.06■□□□□ 0.48
MBD3-201ENST00000156825 MPC1LP0DKB6 136 aa18.06■□□□□ 0.48
MBD3-201ENST00000156825 ATP4BP51164 291 aa18.06■□□□□ 0.48
MBD3-201ENST00000156825 OR6N2Q8NGY6 317 aa18.06■□□□□ 0.48
MBD3-201ENST00000156825 ZUFSPQ96AP4 578 aa18.06■□□□□ 0.48
MBD3-201ENST00000156825 CRELD1Q96HD1 420 aa18.06■□□□□ 0.48
MBD3-201ENST00000156825 MS4A4AQ96JQ5 239 aa18.06■□□□□ 0.48
MBD3-201ENST00000156825 EIF3KQ9UBQ5 218 aaKnown RBP18.06■□□□□ 0.48
MBD3-201ENST00000156825 ADAM12O43184 909 aa18.06■□□□□ 0.48
MBD3-201ENST00000156825 ARSAP15289 507 aa18.06■□□□□ 0.48
MBD3-201ENST00000156825 NTSR1P30989 418 aa18.06■□□□□ 0.48
MBD3-201ENST00000156825 NAA10P41227 235 aaPredicted RBP18.06■□□□□ 0.48
MBD3-201ENST00000156825 TRIM73Q86UV7 250 aa18.06■□□□□ 0.48
MBD3-201ENST00000156825 NCDNQ9UBB6 729 aa18.06■□□□□ 0.48
MBD3-201ENST00000156825 COL2A1P02458 1487 aaPredicted RBP18.06■□□□□ 0.48
MBD3-201ENST00000156825 VEGFDO43915 354 aa18.06■□□□□ 0.48
MBD3-201ENST00000156825 ITGA5P08648 1049 aa18.06■□□□□ 0.48
MBD3-201ENST00000156825 LAMP1P11279 417 aa18.06■□□□□ 0.48
MBD3-201ENST00000156825 RPP38P78345 283 aaKnown RBP18.06■□□□□ 0.48
MBD3-201ENST00000156825 DUS1LQ6P1R4 473 aaKnown RBP18.06■□□□□ 0.48
MBD3-201ENST00000156825 BLOC1S3Q6QNY0 202 aa18.06■□□□□ 0.48
MBD3-201ENST00000156825 NXPE4Q6UWF7 544 aa18.06■□□□□ 0.48
MBD3-201ENST00000156825 ENPP6Q6UWR7 440 aa18.06■□□□□ 0.48
MBD3-201ENST00000156825 LHFPL3Q86UP9 236 aa18.06■□□□□ 0.48
MBD3-201ENST00000156825 GALNT12Q8IXK2 581 aa18.06■□□□□ 0.48
MBD3-201ENST00000156825 CSNK1A1LQ8N752 337 aa18.06■□□□□ 0.48
MBD3-201ENST00000156825 FBXO27Q8NI29 283 aa18.06■□□□□ 0.48
MBD3-201ENST00000156825 DNAJA4Q8WW22 397 aaPredicted RBP18.06■□□□□ 0.48
MBD3-201ENST00000156825 SLC7A6OSQ96CW6 309 aaPredicted RBP18.06■□□□□ 0.48
MBD3-201ENST00000156825 SLC17A9Q9BYT1 436 aa18.06■□□□□ 0.48
MBD3-201ENST00000156825 LDAHQ9H6V9 325 aa18.06■□□□□ 0.48
MBD3-201ENST00000156825 LOC105378220A0A1B0GUY1 285 aaPredicted RBP18.06■□□□□ 0.48
MBD3-201ENST00000156825 OR52A4PA6NMU1 304 aa18.06■□□□□ 0.48
MBD3-201ENST00000156825 CDC40O60508 579 aaKnown RBP eCLIP18.06■□□□□ 0.48
MBD3-201ENST00000156825 NPPAP01160 153 aa18.06■□□□□ 0.48
MBD3-201ENST00000156825 CD72P21854 359 aa18.06■□□□□ 0.48
MBD3-201ENST00000156825 FOXA1P55317 472 aa18.06■□□□□ 0.48
MBD3-201ENST00000156825 IRF5Q13568 498 aa18.06■□□□□ 0.48
MBD3-201ENST00000156825 WDR77Q9BQA1 342 aaPredicted RBP18.06■□□□□ 0.48
MBD3-201ENST00000156825 IL20RAQ9UHF4 553 aa18.06■□□□□ 0.48
MBD3-201ENST00000156825 PCTPQ9UKL6 214 aa18.06■□□□□ 0.48
MBD3-201ENST00000156825 ZNF615Q8N8J6 731 aa18.06■□□□□ 0.48
MBD3-201ENST00000156825 APIPQ96GX9 242 aa18.06■□□□□ 0.48
MBD3-201ENST00000156825 POLDIP3Q9BY77 421 aaKnown RBP18.06■□□□□ 0.48
MBD3-201ENST00000156825 ACTL8Q9H568 366 aa18.06■□□□□ 0.48
MBD3-201ENST00000156825 ZNF878C9JN71 531 aa18.05■□□□□ 0.48
MBD3-201ENST00000156825 HLA-DPB1P04440 258 aa18.05■□□□□ 0.48
MBD3-201ENST00000156825 PTGER1P34995 402 aa18.05■□□□□ 0.48
MBD3-201ENST00000156825 GRIN2CQ14957 1233 aa18.05■□□□□ 0.48
MBD3-201ENST00000156825 EIF4HQ15056 248 aaKnown RBP18.05■□□□□ 0.48
MBD3-201ENST00000156825 HAVCR1Q96D42 359 aa18.05■□□□□ 0.48
MBD3-201ENST00000156825 MSLNLQ96KJ4 702 aa18.05■□□□□ 0.48
MBD3-201ENST00000156825 CXCL16Q9H2A7 254 aa18.05■□□□□ 0.48
MBD3-201ENST00000156825 TIGARQ9NQ88 270 aa18.05■□□□□ 0.48
MBD3-201ENST00000156825 WASH3PC4AMC7 463 aa18.05■□□□□ 0.48
MBD3-201ENST00000156825 ZNF670-ZNF695F2Z2N8 137 aa18.05■□□□□ 0.48
MBD3-201ENST00000156825 PDX1P52945 283 aa18.05■□□□□ 0.48
MBD3-201ENST00000156825 LPAL2Q16609 132 aa18.05■□□□□ 0.48
MBD3-201ENST00000156825 TMEM236Q5W0B7 351 aa18.05■□□□□ 0.48
MBD3-201ENST00000156825 OR8J3Q8NGG0 315 aa18.05■□□□□ 0.48
MBD3-201ENST00000156825 OR5AR1Q8NGP9 310 aa18.05■□□□□ 0.48
MBD3-201ENST00000156825 TCEAL4Q96EI5 215 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms