RNA–Protein interactions for RNA: ENST00000023939.8

RTFDC1-201, Transcript of Protein RTF2 homolog, humanhuman

TSL 2 BASIC

Gene RTFDC1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-201ENST00000023939 ACSL6Q9UKU0 697 aa13.59□□□□□ -0.23
RTFDC1-201ENST00000023939 KLHL20Q9Y2M5 609 aa13.59□□□□□ -0.23
RTFDC1-201ENST00000023939 NUP214P35658 2090 aaPredicted RBP13.58□□□□□ -0.24
RTFDC1-201ENST00000023939 OR6C74A6NCV1 312 aa13.58□□□□□ -0.24
RTFDC1-201ENST00000023939 FAM170BA6NMN3 283 aa13.58□□□□□ -0.24
RTFDC1-201ENST00000023939 C2orf74A8MZ97 194 aa13.58□□□□□ -0.24
RTFDC1-201ENST00000023939 PLOD2O00469 737 aa13.58□□□□□ -0.24
RTFDC1-201ENST00000023939 SUV39H1O43463 412 aa13.58□□□□□ -0.24
RTFDC1-201ENST00000023939 H6PDO95479 791 aa13.58□□□□□ -0.24
RTFDC1-201ENST00000023939 FABP3P05413 133 aa13.58□□□□□ -0.24
RTFDC1-201ENST00000023939 SOAT1P35610 550 aa13.58□□□□□ -0.24
RTFDC1-201ENST00000023939 PRIM2P49643 509 aa13.58□□□□□ -0.24
RTFDC1-201ENST00000023939 PCBP3P57721 371 aaKnown RBP13.58□□□□□ -0.24
RTFDC1-201ENST00000023939 SELENOWP63302 87 aa13.58□□□□□ -0.24
RTFDC1-201ENST00000023939 CDK6Q00534 326 aa13.58□□□□□ -0.24
RTFDC1-201ENST00000023939 APOFQ13790 326 aa13.58□□□□□ -0.24
RTFDC1-201ENST00000023939 SCARB2Q14108 478 aa13.58□□□□□ -0.24
RTFDC1-201ENST00000023939 TCEA2Q15560 299 aa13.58□□□□□ -0.24
RTFDC1-201ENST00000023939 CRB2Q5IJ48 1285 aa13.58□□□□□ -0.24
RTFDC1-201ENST00000023939 OR2T5Q6IEZ7 315 aa13.58□□□□□ -0.24
RTFDC1-201ENST00000023939 KRT80Q6KB66 452 aa13.58□□□□□ -0.24
RTFDC1-201ENST00000023939 SHQ1Q6PI26 577 aaKnown RBP13.58□□□□□ -0.24
RTFDC1-201ENST00000023939 OR2T29Q8NH02 315 aa13.58□□□□□ -0.24
RTFDC1-201ENST00000023939 OR8K5Q8NH50 307 aa13.58□□□□□ -0.24
RTFDC1-201ENST00000023939 EXOSC8Q96B26 276 aaKnown RBP13.58□□□□□ -0.24
RTFDC1-201ENST00000023939 NRBF2Q96F24 287 aa13.58□□□□□ -0.24
RTFDC1-201ENST00000023939 C7orf34Q96L11 122 aa13.58□□□□□ -0.24
RTFDC1-201ENST00000023939 DOHHQ9BU89 302 aa13.58□□□□□ -0.24
RTFDC1-201ENST00000023939 ROGDIQ9GZN7 287 aa13.58□□□□□ -0.24
RTFDC1-201ENST00000023939 A4GALTQ9NPC4 353 aa13.58□□□□□ -0.24
RTFDC1-201ENST00000023939 PADI2Q9Y2J8 665 aa13.58□□□□□ -0.24
RTFDC1-201ENST00000023939 A0A0G2JN53 185 aa13.57□□□□□ -0.24
RTFDC1-201ENST00000023939 A0A1W2PR48 441 aa13.57□□□□□ -0.24
RTFDC1-201ENST00000023939 H3BNH8 94 aa13.57□□□□□ -0.24
RTFDC1-201ENST00000023939 SNAP29O95721 258 aa13.57□□□□□ -0.24
RTFDC1-201ENST00000023939 IFNA14P01570 189 aa13.57□□□□□ -0.24
RTFDC1-201ENST00000023939 LINGO3P0C6S8 592 aa13.57□□□□□ -0.24
RTFDC1-201ENST00000023939 SMIM10L1P0DMW3 83 aa13.57□□□□□ -0.24
RTFDC1-201ENST00000023939 THRBP10828 461 aa13.57□□□□□ -0.24
RTFDC1-201ENST00000023939 DSTNP60981 165 aa13.57□□□□□ -0.24
RTFDC1-201ENST00000023939 KCNJ10P78508 379 aa13.57□□□□□ -0.24
RTFDC1-201ENST00000023939 SPIDRQ14159 915 aa13.57□□□□□ -0.24
RTFDC1-201ENST00000023939 UBXN2BQ14CS0 331 aa13.57□□□□□ -0.24
RTFDC1-201ENST00000023939 OTUD3Q5T2D3 398 aaPredicted RBP13.57□□□□□ -0.24
RTFDC1-201ENST00000023939 FCRL6Q6DN72 434 aa13.57□□□□□ -0.24
RTFDC1-201ENST00000023939 FIGLAQ6QHK4 219 aa13.57□□□□□ -0.24
RTFDC1-201ENST00000023939 ANGPTL8Q6UXH0 198 aa13.57□□□□□ -0.24
RTFDC1-201ENST00000023939 TMEM64Q6YI46 380 aa13.57□□□□□ -0.24
RTFDC1-201ENST00000023939 TAF8Q7Z7C8 310 aa13.57□□□□□ -0.24
RTFDC1-201ENST00000023939 PATL1Q86TB9 770 aaKnown RBP13.57□□□□□ -0.24
RTFDC1-201ENST00000023939 FRMD1Q8N878 549 aa13.57□□□□□ -0.24
RTFDC1-201ENST00000023939 OR5AK3PQ8NH89 298 aa13.57□□□□□ -0.24
RTFDC1-201ENST00000023939 SLC37A2Q8TED4 501 aa13.57□□□□□ -0.24
RTFDC1-201ENST00000023939 RLN3Q8WXF3 142 aa13.57□□□□□ -0.24
RTFDC1-201ENST00000023939 RSC1A1Q92681 617 aa13.57□□□□□ -0.24
RTFDC1-201ENST00000023939 SMIM10Q96HG1 83 aa13.57□□□□□ -0.24
RTFDC1-201ENST00000023939 SLC6A18Q96N87 628 aa13.57□□□□□ -0.24
RTFDC1-201ENST00000023939 AMDHD1Q96NU7 426 aa13.57□□□□□ -0.24
RTFDC1-201ENST00000023939 CDX2Q99626 313 aaPredicted RBP13.57□□□□□ -0.24
RTFDC1-201ENST00000023939 MRPS26Q9BYN8 205 aaKnown RBP13.57□□□□□ -0.24
RTFDC1-201ENST00000023939 PRDM9Q9NQV7 894 aa13.57□□□□□ -0.24
RTFDC1-201ENST00000023939 THUMPD1Q9NXG2 353 aaKnown RBP13.57□□□□□ -0.24
RTFDC1-201ENST00000023939 ANGPT4Q9Y264 503 aa13.57□□□□□ -0.24
RTFDC1-201ENST00000023939 ZNF451Q9Y4E5 1061 aa13.57□□□□□ -0.24
RTFDC1-201ENST00000023939 MAP4K5Q9Y4K4 846 aa13.57□□□□□ -0.24
RTFDC1-201ENST00000023939 ATG4BQ9Y4P1 393 aa13.57□□□□□ -0.24
RTFDC1-201ENST00000023939 SZT2Q5T011 3432 aa13.57□□□□□ -0.24
RTFDC1-201ENST00000023939 A0A1W2PR77 199 aa13.56□□□□□ -0.24
RTFDC1-201ENST00000023939 TRIM64A6NGJ6 449 aa13.56□□□□□ -0.24
RTFDC1-201ENST00000023939 MYO1GB0I1T2 1018 aa13.56□□□□□ -0.24
RTFDC1-201ENST00000023939 ALBP02768 609 aa13.56□□□□□ -0.24
RTFDC1-201ENST00000023939 SLC35G6P0C7Q6 338 aa13.56□□□□□ -0.24
RTFDC1-201ENST00000023939 CTSEP14091 401 aa13.56□□□□□ -0.24
RTFDC1-201ENST00000023939 IL9P15248 144 aa13.56□□□□□ -0.24
RTFDC1-201ENST00000023939 POLR2CP19387 275 aaPredicted RBP13.56□□□□□ -0.24
RTFDC1-201ENST00000023939 MAGP20916 626 aa13.56□□□□□ -0.24
RTFDC1-201ENST00000023939 IST1P53990 364 aa13.56□□□□□ -0.24
RTFDC1-201ENST00000023939 ITGA1P56199 1179 aa13.56□□□□□ -0.24
RTFDC1-201ENST00000023939 VLDLRP98155 873 aa13.56□□□□□ -0.24
RTFDC1-201ENST00000023939 CEBPEQ15744 281 aa13.56□□□□□ -0.24
RTFDC1-201ENST00000023939 RFX4Q33E94 735 aa13.56□□□□□ -0.24
RTFDC1-201ENST00000023939 ZC3H12BQ5HYM0 836 aaKnown RBP13.56□□□□□ -0.24
RTFDC1-201ENST00000023939 SPESP1Q6UW49 350 aa13.56□□□□□ -0.24
RTFDC1-201ENST00000023939 TMEM26Q6ZUK4 368 aa13.56□□□□□ -0.24
RTFDC1-201ENST00000023939 VTCN1Q7Z7D3 282 aa13.56□□□□□ -0.24
RTFDC1-201ENST00000023939 TRIM73Q86UV7 250 aa13.56□□□□□ -0.24
RTFDC1-201ENST00000023939 SPEM1Q8N4L4 309 aa13.56□□□□□ -0.24
RTFDC1-201ENST00000023939 FAM160A2Q8N612 972 aaPredicted RBP13.56□□□□□ -0.24
RTFDC1-201ENST00000023939 AVL9Q8NBF6 648 aa13.56□□□□□ -0.24
RTFDC1-201ENST00000023939 PATE1Q8WXA2 126 aa13.56□□□□□ -0.24
RTFDC1-201ENST00000023939 MACROD1Q9BQ69 325 aa13.56□□□□□ -0.24
RTFDC1-201ENST00000023939 TPSD1Q9BZJ3 242 aa13.56□□□□□ -0.24
RTFDC1-201ENST00000023939 CAAP1Q9H8G2 361 aa13.56□□□□□ -0.24
RTFDC1-201ENST00000023939 CES1P1Q9UKY3 287 aa13.56□□□□□ -0.24
RTFDC1-201ENST00000023939 BAG5Q9UL15 447 aa13.56□□□□□ -0.24
RTFDC1-201ENST00000023939 ABCG2Q9UNQ0 655 aa13.56□□□□□ -0.24
RTFDC1-201ENST00000023939 MYRFQ9Y2G1 1151 aa13.56□□□□□ -0.24
RTFDC1-201ENST00000023939 FANCMQ8IYD8 2048 aa13.56□□□□□ -0.24
RTFDC1-201ENST00000023939 GSAPA4D1B5 854 aa13.56□□□□□ -0.24
RTFDC1-201ENST00000023939 PROM1O43490 865 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms