RNA–Protein interactions for RNA: ENST00000007390.2

TSR3-201, Transcript of TSR3, acp transferase ribosome maturation factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSR3, Length 1,243 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR3-201ENST00000007390 RGMAQ96B86 450 aa23.27■■□□□ 1.32
TSR3-201ENST00000007390 MTBPQ96DY7 904 aa23.27■■□□□ 1.32
TSR3-201ENST00000007390 PHF21BQ96EK2 531 aa23.27■■□□□ 1.32
TSR3-201ENST00000007390 VMP1Q96GC9 406 aa23.27■■□□□ 1.32
TSR3-201ENST00000007390 MTERF1Q99551 399 aaKnown RBP23.27■■□□□ 1.32
TSR3-201ENST00000007390 DEFB126Q9BYW3 111 aa23.27■■□□□ 1.32
TSR3-201ENST00000007390 ANKRD10Q9NXR5 420 aa23.27■■□□□ 1.32
TSR3-201ENST00000007390 PSD3Q9NYI0 1048 aa23.27■■□□□ 1.32
TSR3-201ENST00000007390 ERRFI1Q9UJM3 462 aaPredicted RBP23.27■■□□□ 1.32
TSR3-201ENST00000007390 PCTPQ9UKL6 214 aa23.27■■□□□ 1.32
TSR3-201ENST00000007390 SLC5A6Q9Y289 635 aa23.27■■□□□ 1.32
TSR3-201ENST00000007390 SVILO95425 2214 aa23.27■■□□□ 1.31
TSR3-201ENST00000007390 WIPF3A6NGB9 483 aa23.26■■□□□ 1.31
TSR3-201ENST00000007390 SAP18O00422 153 aaKnown RBP23.26■■□□□ 1.31
TSR3-201ENST00000007390 OR7A17O14581 309 aa23.26■■□□□ 1.31
TSR3-201ENST00000007390 SH3BGRLO75368 114 aa23.26■■□□□ 1.31
TSR3-201ENST00000007390 NEURL1O76050 574 aa23.26■■□□□ 1.31
TSR3-201ENST00000007390 CLDN9O95484 217 aa23.26■■□□□ 1.31
TSR3-201ENST00000007390 GP1BBP13224 206 aa23.26■■□□□ 1.31
TSR3-201ENST00000007390 PTX3P26022 381 aaPredicted RBP23.26■■□□□ 1.31
TSR3-201ENST00000007390 TPP2P29144 1249 aaPredicted RBP23.26■■□□□ 1.31
TSR3-201ENST00000007390 TRHRP34981 398 aaPredicted RBP23.26■■□□□ 1.31
TSR3-201ENST00000007390 GPR143P51810 404 aa23.26■■□□□ 1.31
TSR3-201ENST00000007390 CPSF6Q16630 551 aaKnown RBP eCLIP23.26■■□□□ 1.31
TSR3-201ENST00000007390 CLNKQ7Z7G1 428 aa23.26■■□□□ 1.31
TSR3-201ENST00000007390 CNPY4Q8N129 248 aa23.26■■□□□ 1.31
TSR3-201ENST00000007390 TMEM132CQ8N3T6 1108 aa23.26■■□□□ 1.31
TSR3-201ENST00000007390 ZCCHC7Q8N3Z6 543 aaKnown RBP23.26■■□□□ 1.31
TSR3-201ENST00000007390 RNF175Q8N4F7 328 aa23.26■■□□□ 1.31
TSR3-201ENST00000007390 C7orf57Q8NEG2 295 aa23.26■■□□□ 1.31
TSR3-201ENST00000007390 WDR20Q8TBZ3 569 aa23.26■■□□□ 1.31
TSR3-201ENST00000007390 NOL11Q9H8H0 719 aaKnown RBP23.26■■□□□ 1.31
TSR3-201ENST00000007390 TRIM45Q9H8W5 580 aaPredicted RBP23.26■■□□□ 1.31
TSR3-201ENST00000007390 FETUBQ9UGM5 382 aa23.26■■□□□ 1.31
TSR3-201ENST00000007390 PPT2Q9UMR5 302 aa23.26■■□□□ 1.31
TSR3-201ENST00000007390 RNF11Q9Y3C5 154 aa23.26■■□□□ 1.31
TSR3-201ENST00000007390 TRBV11-1A0A0K0K1C0 115 aa23.25■■□□□ 1.31
TSR3-201ENST00000007390 FOXE1O00358 373 aaPredicted RBP23.25■■□□□ 1.31
TSR3-201ENST00000007390 PLPP1O14494 284 aa23.25■■□□□ 1.31
TSR3-201ENST00000007390 FAM153BP0C7A2 387 aa23.25■■□□□ 1.31
TSR3-201ENST00000007390 RNF224P0DH78 156 aa23.25■■□□□ 1.31
TSR3-201ENST00000007390 CD46P15529 392 aa23.25■■□□□ 1.31
TSR3-201ENST00000007390 RAP1GDS1P52306 607 aa23.25■■□□□ 1.31
TSR3-201ENST00000007390 RPS13P62277 151 aaKnown RBP23.25■■□□□ 1.31
TSR3-201ENST00000007390 OC90Q02509 493 aaPredicted RBP23.25■■□□□ 1.31
TSR3-201ENST00000007390 CUL3Q13618 768 aa23.25■■□□□ 1.31
TSR3-201ENST00000007390 SERTAD2Q14140 314 aa23.25■■□□□ 1.31
TSR3-201ENST00000007390 FAM153CQ494X1 144 aa23.25■■□□□ 1.31
TSR3-201ENST00000007390 TMEM151AQ8N4L1 468 aa23.25■■□□□ 1.31
TSR3-201ENST00000007390 EIF1ADQ8N9N8 165 aaKnown RBP23.25■■□□□ 1.31
TSR3-201ENST00000007390 OR52B6Q8NGF0 335 aa23.25■■□□□ 1.31
TSR3-201ENST00000007390 C5orf34Q96MH7 638 aa23.25■■□□□ 1.31
TSR3-201ENST00000007390 NTMT1Q9BV86 223 aa23.25■■□□□ 1.31
TSR3-201ENST00000007390 MS4A12Q9NXJ0 267 aa23.25■■□□□ 1.31
TSR3-201ENST00000007390 LRFN1Q9P244 771 aa23.25■■□□□ 1.31
TSR3-201ENST00000007390 VTI1BQ9UEU0 232 aa23.25■■□□□ 1.31
TSR3-201ENST00000007390 ZNF223Q9UK11 482 aaPredicted RBP23.25■■□□□ 1.31
TSR3-201ENST00000007390 FCHO1O14526 889 aa23.24■■□□□ 1.31
TSR3-201ENST00000007390 LDLRP01130 860 aa23.24■■□□□ 1.31
TSR3-201ENST00000007390 STX4Q12846 297 aa23.24■■□□□ 1.31
TSR3-201ENST00000007390 ZRSR2Q15696 482 aaKnown RBP23.24■■□□□ 1.31
TSR3-201ENST00000007390 C10orf62Q5T681 223 aaPredicted RBP23.24■■□□□ 1.31
TSR3-201ENST00000007390 ZNF468Q5VIY5 522 aaPredicted RBP23.24■■□□□ 1.31
TSR3-201ENST00000007390 SPINK14Q6IE38 97 aa23.24■■□□□ 1.31
TSR3-201ENST00000007390 LCA5Q86VQ0 697 aa23.24■■□□□ 1.31
TSR3-201ENST00000007390 TMEM178AQ8NBL3 297 aa23.24■■□□□ 1.31
TSR3-201ENST00000007390 LRRN4CLQ8ND94 238 aa23.24■■□□□ 1.31
TSR3-201ENST00000007390 OR14A16Q8NHC5 309 aa23.24■■□□□ 1.31
TSR3-201ENST00000007390 DAZLQ92904 295 aaKnown RBP23.24■■□□□ 1.31
TSR3-201ENST00000007390 NCLNQ969V3 563 aa23.24■■□□□ 1.31
TSR3-201ENST00000007390 SORBS1Q9BX66 1292 aaKnown RBP23.24■■□□□ 1.31
TSR3-201ENST00000007390 ZNF717Q9BY31 904 aaPredicted RBP23.24■■□□□ 1.31
TSR3-201ENST00000007390 ALOXE3Q9BYJ1 711 aa23.24■■□□□ 1.31
TSR3-201ENST00000007390 EPB41L4BQ9H329 900 aa23.24■■□□□ 1.31
TSR3-201ENST00000007390 ZBTB26Q9HCK0 441 aa23.24■■□□□ 1.31
TSR3-201ENST00000007390 PHF11Q9UIL8 331 aa23.24■■□□□ 1.31
TSR3-201ENST00000007390 ICE1Q9Y2F5 2266 aa23.23■■□□□ 1.31
TSR3-201ENST00000007390 IFNA16P05015 189 aa23.23■■□□□ 1.31
TSR3-201ENST00000007390 RPS17P08708 135 aaKnown RBP23.23■■□□□ 1.31
TSR3-201ENST00000007390 SBK3P0C264 359 aa23.23■■□□□ 1.31
TSR3-201ENST00000007390 CPN2P22792 545 aa23.23■■□□□ 1.31
TSR3-201ENST00000007390 CYB561P49447 251 aa23.23■■□□□ 1.31
TSR3-201ENST00000007390 ST13P50502 369 aaKnown RBP23.23■■□□□ 1.31
TSR3-201ENST00000007390 HLCSP50747 726 aa23.23■■□□□ 1.31
TSR3-201ENST00000007390 CCNG1P51959 295 aa23.23■■□□□ 1.31
TSR3-201ENST00000007390 TRAF3Q13114 568 aa23.23■■□□□ 1.31
TSR3-201ENST00000007390 SLAMF1Q13291 335 aa23.23■■□□□ 1.31
TSR3-201ENST00000007390 SLC29A2Q14542 456 aa23.23■■□□□ 1.31
TSR3-201ENST00000007390 MORN4Q8NDC4 146 aa23.23■■□□□ 1.31
TSR3-201ENST00000007390 ATP6V1E2Q96A05 226 aa23.23■■□□□ 1.31
TSR3-201ENST00000007390 NSUN5Q96P11 429 aaKnown RBP23.23■■□□□ 1.31
TSR3-201ENST00000007390 C1QTNF3Q9BXJ4 246 aa23.23■■□□□ 1.31
TSR3-201ENST00000007390 HES7Q9BYE0 225 aa23.23■■□□□ 1.31
TSR3-201ENST00000007390 KLHL1Q9NR64 748 aa23.23■■□□□ 1.31
TSR3-201ENST00000007390 FBXW2Q9UKT8 454 aa23.23■■□□□ 1.31
TSR3-201ENST00000007390 OSGIN2Q9Y236 505 aa23.23■■□□□ 1.31
TSR3-201ENST00000007390 CLCA3PQ9Y6N3 262 aa23.23■■□□□ 1.31
TSR3-201ENST00000007390 ASPDHA6ND91 283 aa23.22■■□□□ 1.31
TSR3-201ENST00000007390 LDB3O75112 727 aa23.22■■□□□ 1.31
TSR3-201ENST00000007390 SP1P08047 785 aa23.22■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms