RNA–Protein interactions for RNA: ENSMUST00000040182.12

Ccdc88a-201, Transcript of Girdin, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Ccdc88a, Length 9,376 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-201ENSMUST00000040182 AspdhQ9DCQ2 287 aa16.04■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 Kcnip3Q9QXT8 256 aa16.04■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 Vmn2r12L7N217 831 aa16.04■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 Rnf13O54965 381 aa16.04■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 Cyb5r2Q3KNK3 276 aa16.04■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 Olfr356Q8VFP5 315 aa16.04■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 H2-T24F8VQG4 363 aa16.03■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 Ufd1P70362 307 aa16.03■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 Kansl1Q80TG1 1036 aaKnown RBP16.03■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 Lcmt2Q8BYR1 686 aa16.03■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 Eri3Q8C460 337 aa16.03■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 DpysQ9EQF5 519 aa16.03■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 Tle2Q9WVB2 767 aa16.03■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 Gm8973D3YX71 104 aa16.03■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 Hmgn1P18608 96 aaKnown RBP16.03■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 Lrig1P70193 1091 aa16.03■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 Cops5O35864 334 aa16.03■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 EdnrbP48302 442 aa16.03■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 Ppp5cQ60676 499 aa16.03■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 Slc35d3Q8BGF8 422 aa16.03■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 Tmigd3G3X8R9 209 aa16.03■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 E330014E10RikQ3UL33 481 aa16.03■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 D5Ertd577eQ499F0 481 aa16.03■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 Has1Q61647 583 aa16.03■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 Hspa12aQ8K0U4 675 aa16.03■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 Cdkn2aipnlQ9D211 116 aaKnown RBP16.03■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 Stk19Q9JHN8 254 aa16.03■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 Pnliprp1Q5BKQ4 473 aa16.03■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 Olfr1036Q7TR85 310 aa16.03■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 Olfr815Q8VFU0 316 aa16.03■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 Metap1dQ9CPW9 335 aa16.03■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 Tyk2Q9R117 1184 aa16.03■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 TicrrQ8BQ33 1889 aa16.03■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 Mterf1bB9EJ57 379 aa16.03■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 Ap1arE9PYF7 298 aa16.03■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 Fkbp14P59024 211 aa16.03■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 B3gat2P59270 324 aa16.03■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 Rbm15Q0VBL3 962 aaKnown RBP16.03■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 Mterf1aQ8CHZ9 379 aa16.03■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 Cmtm2aQ9DAR1 169 aa16.03■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 Esp15A8R0U8 85 aa16.03■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 AdprhP54923 362 aa16.03■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 Tigd2Q0VBL1 525 aa16.03■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 Cpa6Q5U901 438 aa16.03■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 Pno1Q9CPS7 248 aaKnown RBP16.03■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 Ints12Q9D168 461 aa16.03■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 Zfp605E9QAH2 694 aa16.02■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 En2P09066 324 aa16.02■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 Ugt2b17P17717 530 aa16.02■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 Zp2P20239 713 aa16.02■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 Nrp1P97333 923 aa16.02■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 Olfr1094Q8VF13 330 aa16.02■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 Ppa2Q91VM9 330 aa16.02■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 Macrod1Q922B1 323 aa16.02■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 Olfr616Q3KPB0 317 aa16.02■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 AadacQ99PG0 398 aa16.02■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 Pfdn5Q9WU28 154 aa16.02■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 Gys1Q9Z1E4 738 aaKnown RBP16.02■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 Gm37240E9QAY5 252 aa16.02■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 Gm6614M0QWR8 670 aa16.02■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 Fam71bQ5STT6 665 aa16.02■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 IrgcQ8C262 412 aa16.02■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 Cts3Q91ZD5 332 aa16.02■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 Scgb1b30A2BH64 92 aa16.02■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 Pdzd7E9Q9W7 1021 aa16.02■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 Supv3l1Q80YD1 779 aaKnown RBP16.02■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 Gatad2bQ8VHR5 594 aaKnown RBP16.02■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 Edem1Q925U4 652 aa16.02■□□□□ 0.16
Ccdc88a-201ENSMUST00000040182 Galntl6E5D8G1 601 aa16.02■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Gm21833J3QPK1 500 aa16.02■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Papss2O88428 621 aa16.02■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 GuloP58710 440 aa16.02■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Rsu1Q01730 277 aa16.02■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Gm2016Q3TQZ4 144 aa16.02■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Znf182Q6P560 627 aa16.02■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Gm26657Q9CVR1 127 aa16.02■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Nrip2Q9JHR9 270 aa16.02■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Lrrc10bG3XA50 292 aa16.02■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Rnpepl1G5E872 720 aa16.02■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Rgs7O54829 469 aa16.02■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Chrm1P12657 460 aa16.02■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Olfr765Q7TRI6 309 aa16.02■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Csnka2ipQ8CH19 720 aa16.02■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Olfr767Q8VG33 309 aa16.02■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Dcp1aQ91YD3 602 aa16.02■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 NaxdQ9CZ42 343 aa16.02■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Sult2a6B2RVI8 285 aa16.02■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Slc1a5P51912 553 aa16.02■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Lpcat4Q6NVG1 524 aa16.02■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Lrch3Q8BVU0 778 aa16.02■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Larp4Q8BWW4 719 aaKnown RBP16.02■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Cstf2tQ8C7E9 632 aaKnown RBP16.02■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Znf354bQ9QXT9 601 aa16.02■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Tnfsf13bQ9WU72 309 aa16.02■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Hsd17b14E9Q3D4 273 aa16.02■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Gm4775F7ANJ3 135 aa16.02■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Mthfd1Q922D8 935 aa16.02■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Slc33a1Q99J27 550 aa16.02■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Rfx5Q9JL61 658 aa16.02■□□□□ 0.15
Ccdc88a-201ENSMUST00000040182 Olfr1056A2AVY0 313 aa16.01■□□□□ 0.15
Retrieved 100 of 22,080 RNA–protein pairs in 53.4 ms