RNA–Protein interactions for RNA: ENSMUST00000005841.15

Ctcf-201, Transcript of Transcriptional repressor CTCF, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctcf, Length 3,782 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctcf-201ENSMUST00000005841 Wbp2P97765 261 aa16.16■□□□□ 0.18
Ctcf-201ENSMUST00000005841 Rnf149Q3U2C5 394 aa16.16■□□□□ 0.18
Ctcf-201ENSMUST00000005841 Ddx5Q61656 614 aaKnown RBP16.16■□□□□ 0.18
Ctcf-201ENSMUST00000005841 Ca4Q64444 305 aa16.16■□□□□ 0.18
Ctcf-201ENSMUST00000005841 SntnQ8C9X1 147 aa16.16■□□□□ 0.18
Ctcf-201ENSMUST00000005841 Q8CC96 669 aa16.16■□□□□ 0.18
Ctcf-201ENSMUST00000005841 D8Ertd738eQ8R1F0 94 aa16.16■□□□□ 0.18
Ctcf-201ENSMUST00000005841 GhitmQ91VC9 346 aa16.16■□□□□ 0.18
Ctcf-201ENSMUST00000005841 P2ry14Q9ESG6 338 aa16.16■□□□□ 0.18
Ctcf-201ENSMUST00000005841 Plscr3Q9JIZ9 296 aa16.16■□□□□ 0.18
Ctcf-201ENSMUST00000005841 FarsbQ9WUA2 589 aaKnown RBP16.16■□□□□ 0.18
Ctcf-201ENSMUST00000005841 Ep400Q8CHI8 3072 aaKnown RBP16.16■□□□□ 0.18
Ctcf-201ENSMUST00000005841 Olfr414E9Q5P8 317 aa16.16■□□□□ 0.18
Ctcf-201ENSMUST00000005841 Gm16506F7ANP4 213 aa16.16■□□□□ 0.18
Ctcf-201ENSMUST00000005841 Cdkl1Q8CEQ0 352 aa16.16■□□□□ 0.18
Ctcf-201ENSMUST00000005841 Kctd2Q8CEZ0 266 aa16.16■□□□□ 0.18
Ctcf-201ENSMUST00000005841 Dcun1d5Q9CXV9 237 aa16.16■□□□□ 0.18
Ctcf-201ENSMUST00000005841 Q9D9D9 101 aa16.16■□□□□ 0.18
Ctcf-201ENSMUST00000005841 Cib4Q9D9N5 185 aa16.16■□□□□ 0.18
Ctcf-201ENSMUST00000005841 Hax1O35387 280 aa16.15■□□□□ 0.18
Ctcf-201ENSMUST00000005841 Pdlim1O70400 327 aa16.15■□□□□ 0.18
Ctcf-201ENSMUST00000005841 P01675 107 aa16.15■□□□□ 0.18
Ctcf-201ENSMUST00000005841 P01676 107 aa16.15■□□□□ 0.18
Ctcf-201ENSMUST00000005841 P01677 107 aa16.15■□□□□ 0.18
Ctcf-201ENSMUST00000005841 P01678 107 aa16.15■□□□□ 0.18
Ctcf-201ENSMUST00000005841 Nid1P10493 1245 aa16.15■□□□□ 0.18
Ctcf-201ENSMUST00000005841 Cdk1P11440 297 aa16.15■□□□□ 0.18
Ctcf-201ENSMUST00000005841 Upf3aQ3ULJ3 422 aa16.15■□□□□ 0.18
Ctcf-201ENSMUST00000005841 MarcoQ60754 518 aa16.15■□□□□ 0.18
Ctcf-201ENSMUST00000005841 Med22Q62276 200 aa16.15■□□□□ 0.18
Ctcf-201ENSMUST00000005841 Dtx4Q6PDK8 616 aa16.15■□□□□ 0.18
Ctcf-201ENSMUST00000005841 Olfr1313Q7TQW8 311 aa16.15■□□□□ 0.18
Ctcf-201ENSMUST00000005841 Pgr15lQ80T54 456 aa16.15■□□□□ 0.18
Ctcf-201ENSMUST00000005841 Hcar1Q8C131 343 aa16.15■□□□□ 0.18
Ctcf-201ENSMUST00000005841 Noxa1Q8CJ00 444 aa16.15■□□□□ 0.18
Ctcf-201ENSMUST00000005841 SardhQ99LB7 919 aa16.15■□□□□ 0.18
Ctcf-201ENSMUST00000005841 Mfsd13bA0A1L1SUA2 455 aa16.15■□□□□ 0.18
Ctcf-201ENSMUST00000005841 Trim12cD3Z3L3 497 aa16.15■□□□□ 0.18
Ctcf-201ENSMUST00000005841 Gm20503G3UZK1 150 aa16.15■□□□□ 0.18
Ctcf-201ENSMUST00000005841 Vmn2r4K7N784 913 aa16.15■□□□□ 0.18
Ctcf-201ENSMUST00000005841 Gm17174M0QWQ9 212 aa16.15■□□□□ 0.18
Ctcf-201ENSMUST00000005841 Efna3O08545 230 aa16.15■□□□□ 0.18
Ctcf-201ENSMUST00000005841 FxnO35943 207 aa16.15■□□□□ 0.18
Ctcf-201ENSMUST00000005841 Suv39h1O54864 412 aa16.15■□□□□ 0.18
Ctcf-201ENSMUST00000005841 Foxq1O70220 400 aa16.15■□□□□ 0.18
Ctcf-201ENSMUST00000005841 Abcb1aP21447 1276 aa16.15■□□□□ 0.18
Ctcf-201ENSMUST00000005841 Cyp2c37P56654 490 aa16.15■□□□□ 0.18
Ctcf-201ENSMUST00000005841 Spata7Q80VP2 582 aa16.15■□□□□ 0.18
Ctcf-201ENSMUST00000005841 FkrpQ8CG64 494 aa16.15■□□□□ 0.18
Ctcf-201ENSMUST00000005841 Prokr2Q8K458 381 aa16.15■□□□□ 0.18
Ctcf-201ENSMUST00000005841 Gkn2Q9CQS6 184 aa16.15■□□□□ 0.18
Ctcf-201ENSMUST00000005841 Trip4Q9QXN3 581 aa16.15■□□□□ 0.18
Ctcf-201ENSMUST00000005841 Olfr74A2BHP6 318 aa16.15■□□□□ 0.18
Ctcf-201ENSMUST00000005841 Gm12800B1AUV4 484 aa16.15■□□□□ 0.18
Ctcf-201ENSMUST00000005841 Nhsl2B1AXH1 854 aa16.15■□□□□ 0.18
Ctcf-201ENSMUST00000005841 Vmn2r22E9Q7S8 853 aa16.15■□□□□ 0.18
Ctcf-201ENSMUST00000005841 Zfp141G3UY09 685 aa16.15■□□□□ 0.18
Ctcf-201ENSMUST00000005841 Vmn1r31L7N2F1 303 aa16.15■□□□□ 0.18
Ctcf-201ENSMUST00000005841 Kcne1P23299 129 aa16.15■□□□□ 0.18
Ctcf-201ENSMUST00000005841 Ccnb2P30276 398 aa16.15■□□□□ 0.18
Ctcf-201ENSMUST00000005841 Slc26a1P58735 704 aa16.15■□□□□ 0.18
Ctcf-201ENSMUST00000005841 Ctps1P70698 591 aa16.15■□□□□ 0.18
Ctcf-201ENSMUST00000005841 TepsinQ3U3N6 573 aa16.15■□□□□ 0.18
Ctcf-201ENSMUST00000005841 Kcmf1Q80UY2 381 aa16.15■□□□□ 0.18
Ctcf-201ENSMUST00000005841 Nlgn3Q8BYM5 825 aa16.15■□□□□ 0.18
Ctcf-201ENSMUST00000005841 Ankrd54Q91WK7 299 aa16.15■□□□□ 0.18
Ctcf-201ENSMUST00000005841 Rnf146Q9CZW6 359 aa16.15■□□□□ 0.18
Ctcf-201ENSMUST00000005841 Spata19Q9DAQ9 154 aa16.15■□□□□ 0.18
Ctcf-201ENSMUST00000005841 Praf2Q9JIG8 178 aa16.15■□□□□ 0.18
Ctcf-201ENSMUST00000005841 Sgk2Q9QZS5 367 aa16.15■□□□□ 0.18
Ctcf-201ENSMUST00000005841 Smarcb1Q9Z0H3 385 aa16.15■□□□□ 0.18
Ctcf-201ENSMUST00000005841 Dgat1Q9Z2A7 498 aa16.15■□□□□ 0.18
Ctcf-201ENSMUST00000005841 Hsf2P38533 535 aa16.14■□□□□ 0.18
Ctcf-201ENSMUST00000005841 Nfatc2Q60591 927 aa16.14■□□□□ 0.18
Ctcf-201ENSMUST00000005841 Pea15Q62048 130 aa16.14■□□□□ 0.18
Ctcf-201ENSMUST00000005841 Itln1bQ80ZA0 313 aa16.14■□□□□ 0.18
Ctcf-201ENSMUST00000005841 Mettl3Q8C3P7 580 aa16.14■□□□□ 0.18
Ctcf-201ENSMUST00000005841 Tbc1d14Q8CGA2 694 aa16.14■□□□□ 0.18
Ctcf-201ENSMUST00000005841 Mnd1Q8K396 205 aa16.14■□□□□ 0.18
Ctcf-201ENSMUST00000005841 CacybpQ9CXW3 229 aa16.14■□□□□ 0.18
Ctcf-201ENSMUST00000005841 OtofQ9ESF1 1997 aa16.14■□□□□ 0.17
Ctcf-201ENSMUST00000005841 Dcst2A0A140LIJ0 701 aa16.14■□□□□ 0.17
Ctcf-201ENSMUST00000005841 Dcaf4A0A1Y7VNZ0 532 aa16.14■□□□□ 0.17
Ctcf-201ENSMUST00000005841 Cd300ld4A2A7W1 245 aa16.14■□□□□ 0.17
Ctcf-201ENSMUST00000005841 Fpr-rs4A4FUQ5 323 aa16.14■□□□□ 0.17
Ctcf-201ENSMUST00000005841 Sod3O09164 251 aa16.14■□□□□ 0.17
Ctcf-201ENSMUST00000005841 B3gat3P58158 335 aa16.14■□□□□ 0.17
Ctcf-201ENSMUST00000005841 4933415F23RikQ14BX6 153 aa16.14■□□□□ 0.17
Ctcf-201ENSMUST00000005841 Fam149b1Q6NSV7 578 aa16.14■□□□□ 0.17
Ctcf-201ENSMUST00000005841 Cd300ld3Q6SJQ5 245 aa16.14■□□□□ 0.17
Ctcf-201ENSMUST00000005841 RubcnQ80U62 956 aa16.14■□□□□ 0.17
Ctcf-201ENSMUST00000005841 Sertm1Q8CD78 107 aa16.14■□□□□ 0.17
Ctcf-201ENSMUST00000005841 Agpat4Q8K4X7 378 aa16.14■□□□□ 0.17
Ctcf-201ENSMUST00000005841 Grk5Q8VEB1 590 aa16.14■□□□□ 0.17
Ctcf-201ENSMUST00000005841 DgkgQ91WG7 788 aa16.14■□□□□ 0.17
Ctcf-201ENSMUST00000005841 Ripply3Q924S9 152 aa16.14■□□□□ 0.17
Ctcf-201ENSMUST00000005841 Mgat4cQ9D306 478 aa16.14■□□□□ 0.17
Ctcf-201ENSMUST00000005841 Q9DAY5 185 aa16.14■□□□□ 0.17
Ctcf-201ENSMUST00000005841 Glipr1l3A0A1W2P7V2 236 aa16.14■□□□□ 0.17
Ctcf-201ENSMUST00000005841 Gm14147A2AQX6 640 aa16.14■□□□□ 0.17
Retrieved 100 of 22,080 RNA–protein pairs in 23.8 ms