RNA–Protein interactions for RNA: ENST00000640058.1

CCDC7-216, Transcript of coiled-coil domain containing 7, humanhuman

TSL 3

Gene CCDC7, Length 251 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-216ENST00000640058 KBTBD11O94819 623 aa3.47□□□□□ -1.85
CCDC7-216ENST00000640058 RPL34P49207 117 aaKnown RBP3.47□□□□□ -1.85
CCDC7-216ENST00000640058 CCL14Q16627 93 aa3.47□□□□□ -1.85
CCDC7-216ENST00000640058 RFTN2Q52LD8 501 aaPredicted RBP3.47□□□□□ -1.85
CCDC7-216ENST00000640058 RFPL4BQ6ZWI9 263 aa3.47□□□□□ -1.85
CCDC7-216ENST00000640058 TICAM2Q86XR7 235 aa3.47□□□□□ -1.85
CCDC7-216ENST00000640058 TBC1D10CQ8IV04 446 aa3.47□□□□□ -1.85
CCDC7-216ENST00000640058 TDHQ8IZJ6 230 aa3.47□□□□□ -1.85
CCDC7-216ENST00000640058 SMYD1Q8NB12 490 aa3.47□□□□□ -1.85
CCDC7-216ENST00000640058 CCDC191Q8NCU4 936 aa3.47□□□□□ -1.85
CCDC7-216ENST00000640058 OR13C5Q8NGS8 318 aa3.47□□□□□ -1.85
CCDC7-216ENST00000640058 FLVCR1-AS1Q8TAF5 88 aa3.47□□□□□ -1.85
CCDC7-216ENST00000640058 PCNPQ8WW12 178 aaKnown RBP3.47□□□□□ -1.85
CCDC7-216ENST00000640058 SLC35C1Q96A29 364 aa3.47□□□□□ -1.85
CCDC7-216ENST00000640058 BPIFA2Q96DR5 249 aa3.47□□□□□ -1.85
CCDC7-216ENST00000640058 RANBP9Q96S59 729 aa3.47□□□□□ -1.85
CCDC7-216ENST00000640058 CHCHD3Q9NX63 227 aaKnown RBP3.47□□□□□ -1.85
CCDC7-216ENST00000640058 UBQLN2Q9UHD9 624 aa3.47□□□□□ -1.85
CCDC7-216ENST00000640058 TRAV9-2A0A087WT02 112 aa3.46□□□□□ -1.86
CCDC7-216ENST00000640058 ANXA2P2A6NMY6 339 aa3.46□□□□□ -1.86
CCDC7-216ENST00000640058 TMCO5BA8MYB1 307 aa3.46□□□□□ -1.86
CCDC7-216ENST00000640058 CCDC188H7C350 402 aa3.46□□□□□ -1.86
CCDC7-216ENST00000640058 ACSL4O60488 711 aa3.46□□□□□ -1.86
CCDC7-216ENST00000640058 DKC1O60832 514 aaKnown RBP eCLIP3.46□□□□□ -1.86
CCDC7-216ENST00000640058 GIG44P09565 113 aaPredicted RBP3.46□□□□□ -1.86
CCDC7-216ENST00000640058 SRD5A2P31213 254 aa3.46□□□□□ -1.86
CCDC7-216ENST00000640058 NPY4RP50391 375 aa3.46□□□□□ -1.86
CCDC7-216ENST00000640058 IGLV3-21P80748 117 aaPredicted RBP3.46□□□□□ -1.86
CCDC7-216ENST00000640058 FASTKQ14296 549 aaKnown RBP3.46□□□□□ -1.86
CCDC7-216ENST00000640058 LTB4RQ15722 352 aa3.46□□□□□ -1.86
CCDC7-216ENST00000640058 ZNF79Q15937 498 aa3.46□□□□□ -1.86
CCDC7-216ENST00000640058 ARMCX4Q5H9R4 360 aa3.46□□□□□ -1.86
CCDC7-216ENST00000640058 OLFML2AQ68BL7 652 aa3.46□□□□□ -1.86
CCDC7-216ENST00000640058 TXNRD3NBQ6F5E7 133 aa3.46□□□□□ -1.86
CCDC7-216ENST00000640058 ZNF770Q6IQ21 691 aaPredicted RBP3.46□□□□□ -1.86
CCDC7-216ENST00000640058 ARMCX5Q6P1M9 558 aa3.46□□□□□ -1.86
CCDC7-216ENST00000640058 NUFIP2Q7Z417 695 aaKnown RBP3.46□□□□□ -1.86
CCDC7-216ENST00000640058 HSCBQ8IWL3 235 aa3.46□□□□□ -1.86
CCDC7-216ENST00000640058 ZNRF1Q8ND25 227 aa3.46□□□□□ -1.86
CCDC7-216ENST00000640058 OR6F1Q8NGZ6 308 aa3.46□□□□□ -1.86
CCDC7-216ENST00000640058 OCC1Q8TAD7 63 aa3.46□□□□□ -1.86
CCDC7-216ENST00000640058 RIT1Q92963 219 aa3.46□□□□□ -1.86
CCDC7-216ENST00000640058 EXOC4Q96A65 974 aa3.46□□□□□ -1.86
CCDC7-216ENST00000640058 HSD17B14Q9BPX1 270 aa3.46□□□□□ -1.86
CCDC7-216ENST00000640058 LMAN1LQ9HAT1 526 aa3.46□□□□□ -1.86
CCDC7-216ENST00000640058 PDRG1Q9NUG6 133 aa3.46□□□□□ -1.86
CCDC7-216ENST00000640058 RSPH14Q9UHP6 348 aa3.46□□□□□ -1.86
CCDC7-216ENST00000640058 IKZF3Q9UKT9 509 aa3.46□□□□□ -1.86
CCDC7-216ENST00000640058 FBXO7Q9Y3I1 522 aa3.46□□□□□ -1.86
CCDC7-216ENST00000640058 LRRTM2O43300 516 aa3.45□□□□□ -1.86
CCDC7-216ENST00000640058 SRPX2O60687 465 aaPredicted RBP3.45□□□□□ -1.86
CCDC7-216ENST00000640058 PIGRP01833 764 aa3.45□□□□□ -1.86
CCDC7-216ENST00000640058 GBAP04062 536 aa3.45□□□□□ -1.86
CCDC7-216ENST00000640058 SUPT20HL2P0C7V6 817 aa3.45□□□□□ -1.86
CCDC7-216ENST00000640058 PTAFRP25105 342 aa3.45□□□□□ -1.86
CCDC7-216ENST00000640058 SLC1A6P48664 564 aa3.45□□□□□ -1.86
CCDC7-216ENST00000640058 RAD23AP54725 363 aa3.45□□□□□ -1.86
CCDC7-216ENST00000640058 ABRQ12979 859 aa3.45□□□□□ -1.86
CCDC7-216ENST00000640058 CRMP1Q14194 572 aa3.45□□□□□ -1.86
CCDC7-216ENST00000640058 PCK2Q16822 640 aa3.45□□□□□ -1.86
CCDC7-216ENST00000640058 C1orf141Q5JVX7 400 aa3.45□□□□□ -1.86
CCDC7-216ENST00000640058 UTF1Q5T230 341 aa3.45□□□□□ -1.86
CCDC7-216ENST00000640058 RFWD3Q6PCD5 774 aa3.45□□□□□ -1.86
CCDC7-216ENST00000640058 CCDC186Q7Z3E2 898 aa3.45□□□□□ -1.86
CCDC7-216ENST00000640058 SPATA21Q7Z572 469 aa3.45□□□□□ -1.86
CCDC7-216ENST00000640058 MEX3DQ86XN8 651 aaKnown RBP3.45□□□□□ -1.86
CCDC7-216ENST00000640058 GPR148Q8TDV2 347 aa3.45□□□□□ -1.86
CCDC7-216ENST00000640058 MCCC1Q96RQ3 725 aaPredicted RBP3.45□□□□□ -1.86
CCDC7-216ENST00000640058 NMUR1Q9HB89 426 aa3.45□□□□□ -1.86
CCDC7-216ENST00000640058 GIMAP2Q9UG22 337 aa3.45□□□□□ -1.86
CCDC7-216ENST00000640058 SLC6A5Q9Y345 797 aa3.45□□□□□ -1.86
CCDC7-216ENST00000640058 HBS1LQ9Y450 684 aaKnown RBP3.45□□□□□ -1.86
CCDC7-216ENST00000640058 C2orf92A0A1B0GVN3 265 aa3.44□□□□□ -1.86
CCDC7-216ENST00000640058 TSPY2A6NKD2 308 aa3.44□□□□□ -1.86
CCDC7-216ENST00000640058 EIF5BO60841 1220 aaKnown RBP3.44□□□□□ -1.86
CCDC7-216ENST00000640058 IGHG3P01860 377 aa3.44□□□□□ -1.86
CCDC7-216ENST00000640058 OR9G9P0C7N8 305 aa3.44□□□□□ -1.86
CCDC7-216ENST00000640058 ID1P41134 155 aa3.44□□□□□ -1.86
CCDC7-216ENST00000640058 PRKCIP41743 596 aa3.44□□□□□ -1.86
CCDC7-216ENST00000640058 RPP38P78345 283 aaKnown RBP3.44□□□□□ -1.86
CCDC7-216ENST00000640058 NAAAQ02083 359 aa3.44□□□□□ -1.86
CCDC7-216ENST00000640058 FAM133BQ5BKY9 247 aaKnown RBP3.44□□□□□ -1.86
CCDC7-216ENST00000640058 VWA2Q5GFL6 755 aa3.44□□□□□ -1.86
CCDC7-216ENST00000640058 FAM91A1Q658Y4 838 aa3.44□□□□□ -1.86
CCDC7-216ENST00000640058 CREBRFQ8IUR6 639 aa3.44□□□□□ -1.86
CCDC7-216ENST00000640058 ELMOD1Q8N336 334 aa3.44□□□□□ -1.86
CCDC7-216ENST00000640058 BSCL2Q96G97 398 aaPredicted RBP3.44□□□□□ -1.86
CCDC7-216ENST00000640058 ZNF274Q96GC6 653 aaPredicted RBP3.44□□□□□ -1.86
CCDC7-216ENST00000640058 PPP1R16AQ96I34 528 aa3.44□□□□□ -1.86
CCDC7-216ENST00000640058 BAG1Q99933 345 aaPredicted RBP3.44□□□□□ -1.86
CCDC7-216ENST00000640058 RALGAPA1Q6GYQ0 2036 aa3.44□□□□□ -1.86
CCDC7-216ENST00000640058 BCLAF3A2AJT9 711 aaKnown RBP3.43□□□□□ -1.86
CCDC7-216ENST00000640058 CCDC162PA2VCL2 907 aa3.43□□□□□ -1.86
CCDC7-216ENST00000640058 SRRM4A7MD48 611 aaKnown RBP3.43□□□□□ -1.86
CCDC7-216ENST00000640058 FOXI3A8MTJ6 420 aaPredicted RBP3.43□□□□□ -1.86
CCDC7-216ENST00000640058 H7C0S8 307 aa3.43□□□□□ -1.86
CCDC7-216ENST00000640058 RHBDL1O75783 438 aa3.43□□□□□ -1.86
CCDC7-216ENST00000640058 FGF19O95750 216 aa3.43□□□□□ -1.86
CCDC7-216ENST00000640058 LYNP07948 512 aa3.43□□□□□ -1.86
CCDC7-216ENST00000640058 ADRA2CP18825 462 aa3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms