RNA–Protein interactions for RNA: ENST00000639300.1

SCARB2-216, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-216ENST00000639300 ITGB1BP2Q9UKP3 347 aa13.84□□□□□ -0.19
SCARB2-216ENST00000639300 COL16A1Q07092 1604 aaPredicted RBP13.84□□□□□ -0.19
SCARB2-216ENST00000639300 NUP214P35658 2090 aaPredicted RBP13.84□□□□□ -0.19
SCARB2-216ENST00000639300 NHSL1Q5SYE7 1610 aa13.84□□□□□ -0.19
SCARB2-216ENST00000639300 C7orf72A4D263 438 aa13.84□□□□□ -0.19
SCARB2-216ENST00000639300 OR2B6P58173 313 aa13.84□□□□□ -0.19
SCARB2-216ENST00000639300 SLC3A1Q07837 685 aa13.84□□□□□ -0.19
SCARB2-216ENST00000639300 C10orf62Q5T681 223 aaPredicted RBP13.84□□□□□ -0.19
SCARB2-216ENST00000639300 LIN54Q6MZP7 749 aa13.84□□□□□ -0.19
SCARB2-216ENST00000639300 RPTNQ6XPR3 784 aa13.84□□□□□ -0.19
SCARB2-216ENST00000639300 KLHL36Q8N4N3 616 aa13.84□□□□□ -0.19
SCARB2-216ENST00000639300 OR5P2Q8WZ92 322 aa13.84□□□□□ -0.19
SCARB2-216ENST00000639300 POLMQ9NP87 494 aaPredicted RBP13.84□□□□□ -0.19
SCARB2-216ENST00000639300 ZDHHC7Q9NXF8 308 aa13.84□□□□□ -0.19
SCARB2-216ENST00000639300 ACSL5Q9ULC5 683 aa13.84□□□□□ -0.19
SCARB2-216ENST00000639300 A0A1W2PQU0 124 aa13.83□□□□□ -0.19
SCARB2-216ENST00000639300 CELP19835 753 aa13.83□□□□□ -0.19
SCARB2-216ENST00000639300 CTSCP53634 463 aa13.83□□□□□ -0.19
SCARB2-216ENST00000639300 RBBP4Q09028 425 aa13.83□□□□□ -0.19
SCARB2-216ENST00000639300 SLAMF1Q13291 335 aa13.83□□□□□ -0.19
SCARB2-216ENST00000639300 SLC5A8Q8N695 610 aa13.83□□□□□ -0.19
SCARB2-216ENST00000639300 TSEN15Q8WW01 171 aaKnown RBP13.83□□□□□ -0.19
SCARB2-216ENST00000639300 TCEAL4Q96EI5 215 aa13.83□□□□□ -0.19
SCARB2-216ENST00000639300 PDCD10Q9BUL8 212 aa13.83□□□□□ -0.19
SCARB2-216ENST00000639300 TTTY10Q9BZA0 68 aa13.83□□□□□ -0.19
SCARB2-216ENST00000639300 TCRBV3S1A0A5B6 114 aa13.83□□□□□ -0.2
SCARB2-216ENST00000639300 FAM172BPA6NC97 362 aa13.83□□□□□ -0.2
SCARB2-216ENST00000639300 UBFD1O14562 309 aaKnown RBP13.83□□□□□ -0.2
SCARB2-216ENST00000639300 AKAP8O43823 692 aaKnown RBP13.83□□□□□ -0.2
SCARB2-216ENST00000639300 AGXTP21549 392 aa13.83□□□□□ -0.2
SCARB2-216ENST00000639300 IGFALSP35858 605 aa13.83□□□□□ -0.2
SCARB2-216ENST00000639300 NCS1P62166 190 aa13.83□□□□□ -0.2
SCARB2-216ENST00000639300 CTSL3PQ5NE16 218 aa13.83□□□□□ -0.2
SCARB2-216ENST00000639300 CHCHD4Q8N4Q1 142 aa13.83□□□□□ -0.2
SCARB2-216ENST00000639300 OR56A1Q8NGH5 318 aa13.83□□□□□ -0.2
SCARB2-216ENST00000639300 TFAP2CQ92754 450 aa13.83□□□□□ -0.2
SCARB2-216ENST00000639300 ZNF597Q96LX8 424 aa13.83□□□□□ -0.2
SCARB2-216ENST00000639300 MGLLQ99685 303 aa13.83□□□□□ -0.2
SCARB2-216ENST00000639300 ABCG4Q9H172 646 aa13.83□□□□□ -0.2
SCARB2-216ENST00000639300 FZD3Q9NPG1 666 aa13.83□□□□□ -0.2
SCARB2-216ENST00000639300 MAST2Q6P0Q8 1798 aa13.83□□□□□ -0.2
SCARB2-216ENST00000639300 A0A075B6Q4 140 aa13.83□□□□□ -0.2
SCARB2-216ENST00000639300 HPRP00739 348 aa13.83□□□□□ -0.2
SCARB2-216ENST00000639300 EPCAMP16422 314 aa13.83□□□□□ -0.2
SCARB2-216ENST00000639300 RPS3P23396 243 aaKnown RBP eCLIP13.83□□□□□ -0.21e-6■■■■■ 29.8
SCARB2-216ENST00000639300 BLKP51451 505 aa13.83□□□□□ -0.2
SCARB2-216ENST00000639300 TUBA1BP68363 451 aa13.83□□□□□ -0.2
SCARB2-216ENST00000639300 OTUD1Q5VV17 481 aaPredicted RBP13.83□□□□□ -0.2
SCARB2-216ENST00000639300 IKBIPQ70UQ0 350 aa13.83□□□□□ -0.2
SCARB2-216ENST00000639300 TUBA1AQ71U36 451 aa13.83□□□□□ -0.2
SCARB2-216ENST00000639300 SHKBP1Q8TBC3 707 aa13.83□□□□□ -0.2
SCARB2-216ENST00000639300 PIP5K1AQ99755 562 aa13.83□□□□□ -0.2
SCARB2-216ENST00000639300 MED28Q9H204 178 aa13.83□□□□□ -0.2
SCARB2-216ENST00000639300 MKKSQ9NPJ1 570 aaPredicted RBP13.83□□□□□ -0.2
SCARB2-216ENST00000639300 PAK1IP1Q9NWT1 392 aaPredicted RBP13.83□□□□□ -0.2
SCARB2-216ENST00000639300 MGAT4BQ9UQ53 548 aa13.83□□□□□ -0.2
SCARB2-216ENST00000639300 H3BSH0 61 aa13.83□□□□□ -0.2
SCARB2-216ENST00000639300 CSF2P04141 144 aa13.83□□□□□ -0.2
SCARB2-216ENST00000639300 IFI30P13284 250 aa13.83□□□□□ -0.2
SCARB2-216ENST00000639300 ARNTP27540 789 aa13.83□□□□□ -0.2
SCARB2-216ENST00000639300 SGSHP51688 502 aa13.83□□□□□ -0.2
SCARB2-216ENST00000639300 ITPRIPL2Q3MIP1 535 aa13.83□□□□□ -0.2
SCARB2-216ENST00000639300 CBARPQ8N350 705 aaPredicted RBP13.83□□□□□ -0.2
SCARB2-216ENST00000639300 OR8K5Q8NH50 307 aa13.83□□□□□ -0.2
SCARB2-216ENST00000639300 BADQ92934 168 aa13.83□□□□□ -0.2
SCARB2-216ENST00000639300 ASPNQ9BXN1 380 aa13.83□□□□□ -0.2
SCARB2-216ENST00000639300 AKAP7Q9P0M2 348 aaPredicted RBP13.83□□□□□ -0.2
SCARB2-216ENST00000639300 N4BP2Q86UW6 1770 aaPredicted RBP13.82□□□□□ -0.2
SCARB2-216ENST00000639300 CCDC85CA6NKD9 419 aa13.82□□□□□ -0.2
SCARB2-216ENST00000639300 HLA-FP30511 346 aa13.82□□□□□ -0.2
SCARB2-216ENST00000639300 MC1RQ01726 317 aa13.82□□□□□ -0.2
SCARB2-216ENST00000639300 NFATC3Q12968 1075 aa13.82□□□□□ -0.2
SCARB2-216ENST00000639300 KHDRBS2Q5VWX1 349 aaKnown RBP13.82□□□□□ -0.2
SCARB2-216ENST00000639300 OR4N5Q8IXE1 308 aa13.82□□□□□ -0.2
SCARB2-216ENST00000639300 SLC25A36Q96CQ1 311 aa13.82□□□□□ -0.2
SCARB2-216ENST00000639300 CD180Q99467 661 aa13.82□□□□□ -0.2
SCARB2-216ENST00000639300 AGPAT4Q9NRZ5 378 aa13.82□□□□□ -0.2
SCARB2-216ENST00000639300 CLCA3PQ9Y6N3 262 aa13.82□□□□□ -0.2
SCARB2-216ENST00000639300 C2orf92A0A1B0GVN3 265 aa13.82□□□□□ -0.2
SCARB2-216ENST00000639300 J3QLW9 94 aa13.82□□□□□ -0.2
SCARB2-216ENST00000639300 SCAMP2O15127 329 aaKnown RBP13.82□□□□□ -0.2
SCARB2-216ENST00000639300 KLHL18O94889 574 aa13.82□□□□□ -0.2
SCARB2-216ENST00000639300 TFAP2AP05549 437 aa13.82□□□□□ -0.2
SCARB2-216ENST00000639300 ZNF19P17023 458 aa13.82□□□□□ -0.2
SCARB2-216ENST00000639300 TACR1P25103 407 aa13.82□□□□□ -0.2
SCARB2-216ENST00000639300 LIPKQ5VXJ0 399 aa13.82□□□□□ -0.2
SCARB2-216ENST00000639300 ABHD13Q7L211 337 aa13.82□□□□□ -0.2
SCARB2-216ENST00000639300 NEIL2Q969S2 332 aa13.82□□□□□ -0.2
SCARB2-216ENST00000639300 LHPPQ9H008 270 aa13.82□□□□□ -0.2
SCARB2-216ENST00000639300 PNO1Q9NRX1 252 aaKnown RBP13.82□□□□□ -0.2
SCARB2-216ENST00000639300 COL22A1Q8NFW1 1626 aaPredicted RBP13.82□□□□□ -0.2
SCARB2-216ENST00000639300 ADAMTS7Q9UKP4 1686 aa13.82□□□□□ -0.2
SCARB2-216ENST00000639300 ELOA3DA6NLF2 546 aaPredicted RBP13.82□□□□□ -0.2
SCARB2-216ENST00000639300 ACVR2AP27037 513 aa13.82□□□□□ -0.2
SCARB2-216ENST00000639300 CLCN7P51798 805 aa13.82□□□□□ -0.2
SCARB2-216ENST00000639300 RAB15P59190 212 aa13.82□□□□□ -0.2
SCARB2-216ENST00000639300 SELPLGQ14242 412 aa13.82□□□□□ -0.2
SCARB2-216ENST00000639300 CLCA4Q14CN2 919 aa13.82□□□□□ -0.2
SCARB2-216ENST00000639300 ELOA3BQ3SY89 546 aa13.82□□□□□ -0.2
SCARB2-216ENST00000639300 PRRT3Q5FWE3 981 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms