RNA–Protein interactions for RNA: ENST00000638514.1

KCNMA1-238, Transcript of potassium calcium-activated channel subfamily M alpha 1, human

APPRIS ALT2 TSL 5

Gene KCNMA1, Length 3,711 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KCNMA1-238	ENST00000638514	ZFP37	Q9Y6Q3	630 aa	Predicted RBP	13.1	□□□□□ -0.31
KCNMA1-238	ENST00000638514	AP2A2	O94973	939 aa		13.1	□□□□□ -0.31
KCNMA1-238	ENST00000638514	COX7A2	P14406	83 aa		13.1	□□□□□ -0.31
KCNMA1-238	ENST00000638514	PRPS1L1	P21108	318 aa		13.1	□□□□□ -0.31
KCNMA1-238	ENST00000638514	RPS3	P23396	243 aa	Known RBP eCLIP	13.1	□□□□□ -0.31
KCNMA1-238	ENST00000638514	RRAS2	P62070	204 aa	Predicted RBP	13.1	□□□□□ -0.31
KCNMA1-238	ENST00000638514	TMEM65	Q6PI78	240 aa		13.1	□□□□□ -0.31
KCNMA1-238	ENST00000638514	MBOAT1	Q6ZNC8	495 aa		13.1	□□□□□ -0.31
KCNMA1-238	ENST00000638514	MAL2	Q969L2	176 aa		13.1	□□□□□ -0.31
KCNMA1-238	ENST00000638514	SPATA9	Q9BWV2	254 aa		13.1	□□□□□ -0.31
KCNMA1-238	ENST00000638514	EBPL	Q9BY08	206 aa		13.1	□□□□□ -0.31
KCNMA1-238	ENST00000638514	RBFOX1	Q9NWB1	397 aa	Known RBP	13.1	□□□□□ -0.31
KCNMA1-238	ENST00000638514	CLEC2D	Q9UHP7	191 aa		13.1	□□□□□ -0.31
KCNMA1-238	ENST00000638514	ENOPH1	Q9UHY7	261 aa		13.1	□□□□□ -0.31
KCNMA1-238	ENST00000638514	NDRG2	Q9UN36	371 aa	Known RBP	13.1	□□□□□ -0.31
KCNMA1-238	ENST00000638514	PCDHB11	Q9Y5F2	797 aa		13.1	□□□□□ -0.31
KCNMA1-238	ENST00000638514	TRAV19	A0A0A6YYK7	116 aa		13.09	□□□□□ -0.31
KCNMA1-238	ENST00000638514		I3L521	148 aa		13.09	□□□□□ -0.31
KCNMA1-238	ENST00000638514	PLD2	O14939	933 aa		13.09	□□□□□ -0.31
KCNMA1-238	ENST00000638514	IL1A	P01583	271 aa		13.09	□□□□□ -0.31
KCNMA1-238	ENST00000638514	OPN1SW	P03999	348 aa		13.09	□□□□□ -0.31
KCNMA1-238	ENST00000638514	PCSK2	P16519	638 aa		13.09	□□□□□ -0.31
KCNMA1-238	ENST00000638514	BRCA2	P51587	3418 aa		13.09	□□□□□ -0.31
KCNMA1-238	ENST00000638514	WNT3	P56703	355 aa		13.09	□□□□□ -0.31
KCNMA1-238	ENST00000638514	RAB25	P57735	213 aa		13.09	□□□□□ -0.31
KCNMA1-238	ENST00000638514	SELENOW	P63302	87 aa		13.09	□□□□□ -0.31
KCNMA1-238	ENST00000638514	CACNG1	Q06432	222 aa		13.09	□□□□□ -0.31
KCNMA1-238	ENST00000638514	DBP	Q10586	325 aa	Predicted RBP	13.09	□□□□□ -0.31
KCNMA1-238	ENST00000638514	WSCD2	Q2TBF2	565 aa		13.09	□□□□□ -0.31
KCNMA1-238	ENST00000638514	SYT12	Q8IV01	421 aa		13.09	□□□□□ -0.31
KCNMA1-238	ENST00000638514	MSANTD3	Q96H12	275 aa		13.09	□□□□□ -0.31
KCNMA1-238	ENST00000638514	HYLS1	Q96M11	299 aa		13.09	□□□□□ -0.31
KCNMA1-238	ENST00000638514	POLR2J2	Q9GZM3	115 aa	Known RBP	13.09	□□□□□ -0.31
KCNMA1-238	ENST00000638514	MCOLN1	Q9GZU1	580 aa		13.09	□□□□□ -0.31
KCNMA1-238	ENST00000638514	KATNBL1	Q9H079	304 aa		13.09	□□□□□ -0.31
KCNMA1-238	ENST00000638514	NDUFB11	Q9NX14	153 aa		13.09	□□□□□ -0.31
KCNMA1-238	ENST00000638514	STOML2	Q9UJZ1	356 aa		13.09	□□□□□ -0.31
KCNMA1-238	ENST00000638514	AP1M2	Q9Y6Q5	423 aa		13.09	□□□□□ -0.31
KCNMA1-238	ENST00000638514	MYO16	Q9Y6X6	1858 aa		13.09	□□□□□ -0.31
KCNMA1-238	ENST00000638514	FAM240B	A0A1B0GVZ2	78 aa		13.09	□□□□□ -0.31
KCNMA1-238	ENST00000638514	WASHC1	A8K0Z3	465 aa		13.09	□□□□□ -0.31
KCNMA1-238	ENST00000638514	TMEM229A	B2RXF0	380 aa		13.09	□□□□□ -0.31
KCNMA1-238	ENST00000638514	SEPT4	O43236	478 aa		13.09	□□□□□ -0.31
KCNMA1-238	ENST00000638514	HCN1	O60741	890 aa		13.09	□□□□□ -0.31
KCNMA1-238	ENST00000638514	TBL1X	O60907	577 aa		13.09	□□□□□ -0.31
KCNMA1-238	ENST00000638514	LGI1	O95970	557 aa		13.09	□□□□□ -0.31
KCNMA1-238	ENST00000638514	CLEC2L	P0C7M8	214 aa		13.09	□□□□□ -0.31
KCNMA1-238	ENST00000638514	PRKAR1A	P10644	381 aa		13.09	□□□□□ -0.31
KCNMA1-238	ENST00000638514	MAN2A2	P49641	1150 aa		13.09	□□□□□ -0.31
KCNMA1-238	ENST00000638514	UGT8	Q16880	541 aa		13.09	□□□□□ -0.31
KCNMA1-238	ENST00000638514	HKDC1	Q2TB90	917 aa		13.09	□□□□□ -0.31
KCNMA1-238	ENST00000638514	IFI44L	Q53G44	452 aa		13.09	□□□□□ -0.31
KCNMA1-238	ENST00000638514	EEF1AKMT2	Q5JPI9	291 aa	Known RBP	13.09	□□□□□ -0.31
KCNMA1-238	ENST00000638514	ZBTB37	Q5TC79	503 aa		13.09	□□□□□ -0.31
KCNMA1-238	ENST00000638514	HSDL2	Q6YN16	418 aa		13.09	□□□□□ -0.31
KCNMA1-238	ENST00000638514	SLC24A5	Q71RS6	500 aa		13.09	□□□□□ -0.31
KCNMA1-238	ENST00000638514	CLDN22	Q8N7P3	220 aa		13.09	□□□□□ -0.31
KCNMA1-238	ENST00000638514	ATP6V1C2	Q8NEY4	427 aa		13.09	□□□□□ -0.31
KCNMA1-238	ENST00000638514	LKAAEAR1	Q8TD35	194 aa		13.09	□□□□□ -0.31
KCNMA1-238	ENST00000638514	ZC3HAV1L	Q96H79	300 aa	Known RBP	13.09	□□□□□ -0.31
KCNMA1-238	ENST00000638514	FAM129B	Q96TA1	746 aa		13.09	□□□□□ -0.31
KCNMA1-238	ENST00000638514	ZNF304	Q9HCX3	659 aa		13.09	□□□□□ -0.31
KCNMA1-238	ENST00000638514	PAK6	Q9NQU5	681 aa	Predicted RBP	13.09	□□□□□ -0.31
KCNMA1-238	ENST00000638514	SH3BP4	Q9P0V3	963 aa		13.09	□□□□□ -0.31
KCNMA1-238	ENST00000638514	RAI2	Q9Y5P3	530 aa		13.09	□□□□□ -0.31
KCNMA1-238	ENST00000638514		A0A0U1RQF3	1178 aa		13.09	□□□□□ -0.31
KCNMA1-238	ENST00000638514	LINC00862	A6NCI5	91 aa		13.09	□□□□□ -0.31
KCNMA1-238	ENST00000638514	SCN2B	O60939	215 aa		13.09	□□□□□ -0.31
KCNMA1-238	ENST00000638514	TP53	P04637	393 aa	Predicted RBP	13.09	□□□□□ -0.31
KCNMA1-238	ENST00000638514	ALPI	P09923	528 aa		13.09	□□□□□ -0.31
KCNMA1-238	ENST00000638514	SLC2A2	P11168	524 aa	Predicted RBP	13.09	□□□□□ -0.31
KCNMA1-238	ENST00000638514	HLA-E	P13747	358 aa		13.09	□□□□□ -0.31
KCNMA1-238	ENST00000638514	POU1F1	P28069	291 aa		13.09	□□□□□ -0.31
KCNMA1-238	ENST00000638514	CNR2	P34972	360 aa		13.09	□□□□□ -0.31
KCNMA1-238	ENST00000638514	RECQL	P46063	649 aa	Predicted RBP	13.09	□□□□□ -0.31
KCNMA1-238	ENST00000638514	OR1E2	P47887	323 aa		13.09	□□□□□ -0.31
KCNMA1-238	ENST00000638514	ZXDB	P98169	803 aa		13.09	□□□□□ -0.31
KCNMA1-238	ENST00000638514	MFSD13A	Q14CX5	517 aa		13.09	□□□□□ -0.31
KCNMA1-238	ENST00000638514	NOXRED1	Q6NXP6	359 aa		13.09	□□□□□ -0.31
KCNMA1-238	ENST00000638514	METTL2B	Q6P1Q9	378 aa	Known RBP	13.09	□□□□□ -0.31
KCNMA1-238	ENST00000638514	KLHL17	Q6TDP4	642 aa		13.09	□□□□□ -0.31
KCNMA1-238	ENST00000638514	PLEKHM3	Q6ZWE6	761 aa		13.09	□□□□□ -0.31
KCNMA1-238	ENST00000638514	ZNF366	Q8N895	744 aa		13.09	□□□□□ -0.31
KCNMA1-238	ENST00000638514	GALNT11	Q8NCW6	608 aa		13.09	□□□□□ -0.31
KCNMA1-238	ENST00000638514	GIMAP1	Q8WWP7	306 aa		13.09	□□□□□ -0.31
KCNMA1-238	ENST00000638514	DCLRE1C	Q96SD1	692 aa	Known RBP	13.09	□□□□□ -0.31
KCNMA1-238	ENST00000638514	MND1	Q9BWT6	205 aa		13.09	□□□□□ -0.31
KCNMA1-238	ENST00000638514	SMG9	Q9H0W8	520 aa	Known RBP	13.09	□□□□□ -0.31
KCNMA1-238	ENST00000638514	CRISPLD1	Q9H336	500 aa		13.09	□□□□□ -0.31
KCNMA1-238	ENST00000638514	FAM120C	Q9NX05	1096 aa	Known RBP	13.09	□□□□□ -0.31
KCNMA1-238	ENST00000638514	NLK	Q9UBE8	527 aa		13.09	□□□□□ -0.31
KCNMA1-238	ENST00000638514		A8MVJ9	347 aa		13.08	□□□□□ -0.32
KCNMA1-238	ENST00000638514		H7C0S8	307 aa		13.08	□□□□□ -0.32
KCNMA1-238	ENST00000638514	BTN3A3	O00478	584 aa		13.08	□□□□□ -0.32
KCNMA1-238	ENST00000638514	SLC22A5	O76082	557 aa		13.08	□□□□□ -0.32
KCNMA1-238	ENST00000638514	GJB5	O95377	273 aa		13.08	□□□□□ -0.32
KCNMA1-238	ENST00000638514	ZNF7	P17097	686 aa	Predicted RBP	13.08	□□□□□ -0.32
KCNMA1-238	ENST00000638514	PCGF2	P35227	344 aa		13.08	□□□□□ -0.32
KCNMA1-238	ENST00000638514	DSTN	P60981	165 aa		13.08	□□□□□ -0.32
KCNMA1-238	ENST00000638514	DDX53	Q86TM3	631 aa	Known RBP	13.08	□□□□□ -0.32

Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms