RNA–Protein interactions for RNA: ENST00000637897.1

PNKP-229, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 190 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-229ENST00000637897 PDAP1Q13442 181 aaKnown RBP7.36□□□□□ -1.23
PNKP-229ENST00000637897 RUNX2Q13950 521 aa7.36□□□□□ -1.23
PNKP-229ENST00000637897 TLR1Q15399 786 aa7.36□□□□□ -1.23
PNKP-229ENST00000637897 CDSNQ15517 529 aa7.36□□□□□ -1.23
PNKP-229ENST00000637897 CHI3L2Q15782 390 aa7.36□□□□□ -1.23
PNKP-229ENST00000637897 DEFB134Q4QY38 66 aa7.36□□□□□ -1.23
PNKP-229ENST00000637897 RNFT1Q5M7Z0 435 aa7.36□□□□□ -1.23
PNKP-229ENST00000637897 SPDYAQ5MJ70 313 aa7.36□□□□□ -1.23
PNKP-229ENST00000637897 PLAG1Q6DJT9 500 aa7.36□□□□□ -1.23
PNKP-229ENST00000637897 LRRC8EQ6NSJ5 796 aa7.36□□□□□ -1.23
PNKP-229ENST00000637897 NXPE4Q6UWF7 544 aa7.36□□□□□ -1.23
PNKP-229ENST00000637897 RIPOR1Q6ZS17 1223 aa7.36□□□□□ -1.23
PNKP-229ENST00000637897 UBE3DQ7Z6J8 389 aa7.36□□□□□ -1.23
PNKP-229ENST00000637897 CRLF3Q8IUI8 442 aa7.36□□□□□ -1.23
PNKP-229ENST00000637897 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP7.36□□□□□ -1.23
PNKP-229ENST00000637897 BEST3Q8N1M1 668 aa7.36□□□□□ -1.23
PNKP-229ENST00000637897 CAMKVQ8NCB2 501 aa7.36□□□□□ -1.23
PNKP-229ENST00000637897 MDS2Q8NDY4 140 aa7.36□□□□□ -1.23
PNKP-229ENST00000637897 PPP1R14CQ8TAE6 165 aa7.36□□□□□ -1.23
PNKP-229ENST00000637897 RDH11Q8TC12 318 aa7.36□□□□□ -1.23
PNKP-229ENST00000637897 ELP5Q8TE02 316 aa7.36□□□□□ -1.23
PNKP-229ENST00000637897 TSPAN17Q96FV3 270 aa7.36□□□□□ -1.23
PNKP-229ENST00000637897 UBXN10Q96LJ8 280 aa7.36□□□□□ -1.23
PNKP-229ENST00000637897 QRFPRQ96P65 431 aa7.36□□□□□ -1.23
PNKP-229ENST00000637897 RNF32Q9H0A6 362 aa7.36□□□□□ -1.23
PNKP-229ENST00000637897 PCBD2Q9H0N5 130 aa7.36□□□□□ -1.23
PNKP-229ENST00000637897 C12orf65Q9H3J6 166 aaKnown RBP7.36□□□□□ -1.23
PNKP-229ENST00000637897 NECTIN3Q9NQS3 549 aa7.36□□□□□ -1.23
PNKP-229ENST00000637897 RIC8BQ9NVN3 520 aa7.36□□□□□ -1.23
PNKP-229ENST00000637897 THAP1Q9NVV9 213 aa7.36□□□□□ -1.23
PNKP-229ENST00000637897 MAP10Q9P2G4 905 aa7.36□□□□□ -1.23
PNKP-229ENST00000637897 COPG2Q9UBF2 871 aa7.36□□□□□ -1.23
PNKP-229ENST00000637897 ZFP69BQ9UJL9 534 aa7.36□□□□□ -1.23
PNKP-229ENST00000637897 CORO1CQ9ULV4 474 aaPredicted RBP7.36□□□□□ -1.23
PNKP-229ENST00000637897 OARD1Q9Y530 152 aa7.36□□□□□ -1.23
PNKP-229ENST00000637897 MYO9AB2RTY4 2548 aa7.36□□□□□ -1.23
PNKP-229ENST00000637897 CSMD2Q7Z408 3487 aa7.36□□□□□ -1.23
PNKP-229ENST00000637897 NCOA6Q14686 2063 aaPredicted RBP7.36□□□□□ -1.23
PNKP-229ENST00000637897 A0A087X1B8 175 aa7.35□□□□□ -1.23
PNKP-229ENST00000637897 A0A0G2JN53 185 aa7.35□□□□□ -1.23
PNKP-229ENST00000637897 TMEM200CA6NKL6 621 aa7.35□□□□□ -1.23
PNKP-229ENST00000637897 PRKNO60260 465 aaPredicted RBP7.35□□□□□ -1.23
PNKP-229ENST00000637897 SNNO75324 88 aaPredicted RBP7.35□□□□□ -1.23
PNKP-229ENST00000637897 ATP5HO75947 161 aa7.35□□□□□ -1.23
PNKP-229ENST00000637897 NEURL1O76050 574 aa7.35□□□□□ -1.23
PNKP-229ENST00000637897 SERPINE1P05121 402 aa7.35□□□□□ -1.23
PNKP-229ENST00000637897 C2P06681 752 aa7.35□□□□□ -1.23
PNKP-229ENST00000637897 STSP08842 583 aa7.35□□□□□ -1.23
PNKP-229ENST00000637897 ENO2P09104 434 aaPredicted RBP7.35□□□□□ -1.23
PNKP-229ENST00000637897 EDN3P14138 238 aa7.35□□□□□ -1.23
PNKP-229ENST00000637897 CPA3P15088 417 aa7.35□□□□□ -1.23
PNKP-229ENST00000637897 STMN1P16949 149 aa7.35□□□□□ -1.23
PNKP-229ENST00000637897 MAOAP21397 527 aa7.35□□□□□ -1.23
PNKP-229ENST00000637897 CCND1P24385 295 aa7.35□□□□□ -1.23
PNKP-229ENST00000637897 PPP2R1BP30154 601 aa7.35□□□□□ -1.23
PNKP-229ENST00000637897 AHRP35869 848 aa7.35□□□□□ -1.23
PNKP-229ENST00000637897 GGT5P36269 586 aa7.35□□□□□ -1.23
PNKP-229ENST00000637897 DCTP40126 519 aa7.35□□□□□ -1.23
PNKP-229ENST00000637897 CD96P40200 585 aa7.35□□□□□ -1.23
PNKP-229ENST00000637897 HNF4AP41235 474 aa7.35□□□□□ -1.23
PNKP-229ENST00000637897 AVPR1BP47901 424 aa7.35□□□□□ -1.23
PNKP-229ENST00000637897 PRKAA2P54646 552 aa7.35□□□□□ -1.23
PNKP-229ENST00000637897 SLC12A2P55011 1212 aa7.35□□□□□ -1.23
PNKP-229ENST00000637897 SLC26A5P58743 744 aa7.35□□□□□ -1.23
PNKP-229ENST00000637897 POU4F1Q01851 419 aa7.35□□□□□ -1.23
PNKP-229ENST00000637897 GTF3C1Q12789 2109 aa7.35□□□□□ -1.23
PNKP-229ENST00000637897 PWP1Q13610 501 aa7.35□□□□□ -1.23
PNKP-229ENST00000637897 TUBA3CQ13748 450 aa7.35□□□□□ -1.23
PNKP-229ENST00000637897 E2F2Q14209 437 aa7.35□□□□□ -1.23
PNKP-229ENST00000637897 USP10Q14694 798 aaKnown RBP7.35□□□□□ -1.23
PNKP-229ENST00000637897 TGFBIQ15582 683 aa7.35□□□□□ -1.23
PNKP-229ENST00000637897 NDUFA9Q16795 377 aa7.35□□□□□ -1.23
PNKP-229ENST00000637897 TSNAXIP1Q2TAA8 658 aa7.35□□□□□ -1.23
PNKP-229ENST00000637897 GALNTL6Q49A17 601 aa7.35□□□□□ -1.23
PNKP-229ENST00000637897 MINDY4Q4G0A6 757 aa7.35□□□□□ -1.23
PNKP-229ENST00000637897 SFT2D3Q587I9 215 aa7.35□□□□□ -1.23
PNKP-229ENST00000637897 SPINK14Q6IE38 97 aa7.35□□□□□ -1.23
PNKP-229ENST00000637897 TUBA3EQ6PEY2 450 aa7.35□□□□□ -1.23
PNKP-229ENST00000637897 RAPH1Q70E73 1250 aa7.35□□□□□ -1.23
PNKP-229ENST00000637897 FGD2Q7Z6J4 655 aa7.35□□□□□ -1.23
PNKP-229ENST00000637897 TMPRSS11BQ86T26 416 aa7.35□□□□□ -1.23
PNKP-229ENST00000637897 CA13Q8N1Q1 262 aa7.35□□□□□ -1.23
PNKP-229ENST00000637897 C10orf82Q8WW14 230 aa7.35□□□□□ -1.23
PNKP-229ENST00000637897 TM9SF4Q92544 642 aa7.35□□□□□ -1.23
PNKP-229ENST00000637897 NR4A3Q92570 626 aa7.35□□□□□ -1.23
PNKP-229ENST00000637897 SCMH1Q96GD3 660 aa7.35□□□□□ -1.23
PNKP-229ENST00000637897 LRRC37BQ96QE4 947 aa7.35□□□□□ -1.23
PNKP-229ENST00000637897 SIKE1Q9BRV8 207 aa7.35□□□□□ -1.23
PNKP-229ENST00000637897 HAUS8Q9BT25 410 aa7.35□□□□□ -1.23
PNKP-229ENST00000637897 TUBB6Q9BUF5 446 aa7.35□□□□□ -1.23
PNKP-229ENST00000637897 DERL2Q9GZP9 239 aa7.35□□□□□ -1.23
PNKP-229ENST00000637897 EPS8L2Q9H6S3 715 aa7.35□□□□□ -1.23
PNKP-229ENST00000637897 PELI2Q9HAT8 420 aa7.35□□□□□ -1.23
PNKP-229ENST00000637897 ANKHQ9HCJ1 492 aa7.35□□□□□ -1.23
PNKP-229ENST00000637897 NPHS2Q9NP85 383 aa7.35□□□□□ -1.23
PNKP-229ENST00000637897 MMP25Q9NPA2 562 aa7.35□□□□□ -1.23
PNKP-229ENST00000637897 ANKRD10Q9NXR5 420 aa7.35□□□□□ -1.23
PNKP-229ENST00000637897 EMCNQ9ULC0 261 aa7.35□□□□□ -1.23
PNKP-229ENST00000637897 G3BP2Q9UN86 482 aaKnown RBP7.35□□□□□ -1.23
PNKP-229ENST00000637897 SLC12A4Q9UP95 1085 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms