RNA–Protein interactions for RNA: ENST00000637329.1

CLN6-219, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,204 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-219ENST00000637329 TAS2R7Q9NYW3 318 aa14.57□□□□□ -0.08
CLN6-219ENST00000637329 NIPSNAP3AQ9UFN0 247 aaPredicted RBP14.57□□□□□ -0.08
CLN6-219ENST00000637329 PLCL2Q9UPR0 1127 aa14.57□□□□□ -0.08
CLN6-219ENST00000637329 U3KQA8 63 aa14.57□□□□□ -0.08
CLN6-219ENST00000637329 LOC105369274A0A096LPK9 316 aa14.56□□□□□ -0.08
CLN6-219ENST00000637329 LOC102723532A0A0G2JNH3 316 aa14.56□□□□□ -0.08
CLN6-219ENST00000637329 C1orf226A1L170 272 aa14.56□□□□□ -0.08
CLN6-219ENST00000637329 EME2A4GXA9 379 aaPredicted RBP14.56□□□□□ -0.08
CLN6-219ENST00000637329 A8MUI8 341 aa14.56□□□□□ -0.08
CLN6-219ENST00000637329 PDPK1O15530 556 aa14.56□□□□□ -0.08
CLN6-219ENST00000637329 SIGLEC6O43699 453 aa14.56□□□□□ -0.08
CLN6-219ENST00000637329 ANP32DO95626 131 aa14.56□□□□□ -0.08
CLN6-219ENST00000637329 ENGP17813 658 aa14.56□□□□□ -0.08
CLN6-219ENST00000637329 ALOX12P18054 663 aa14.56□□□□□ -0.08
CLN6-219ENST00000637329 PPIBP23284 216 aaKnown RBP14.56□□□□□ -0.08
CLN6-219ENST00000637329 CERS1P27544 350 aa14.56□□□□□ -0.08
CLN6-219ENST00000637329 CD1CP29017 333 aa14.56□□□□□ -0.08
CLN6-219ENST00000637329 FRKP42685 505 aaPredicted RBP14.56□□□□□ -0.08
CLN6-219ENST00000637329 GABRA4P48169 554 aa14.56□□□□□ -0.08
CLN6-219ENST00000637329 PRTGQ2VWP7 1150 aa14.56□□□□□ -0.08
CLN6-219ENST00000637329 ZNF385BQ569K4 471 aa14.56□□□□□ -0.08
CLN6-219ENST00000637329 TCTE1Q5JU00 501 aa14.56□□□□□ -0.08
CLN6-219ENST00000637329 PLA2G2CQ5R387 149 aa14.56□□□□□ -0.08
CLN6-219ENST00000637329 NDUFAF5Q5TEU4 345 aa14.56□□□□□ -0.08
CLN6-219ENST00000637329 TICAM1Q8IUC6 712 aa14.56□□□□□ -0.08
CLN6-219ENST00000637329 OR4N4Q8N0Y3 316 aa14.56□□□□□ -0.08
CLN6-219ENST00000637329 FAM47BQ8NA70 645 aa14.56□□□□□ -0.08
CLN6-219ENST00000637329 GOT1L1Q8NHS2 421 aaPredicted RBP14.56□□□□□ -0.08
CLN6-219ENST00000637329 DNAJB14Q8TBM8 379 aa14.56□□□□□ -0.08
CLN6-219ENST00000637329 WDR60Q8WVS4 1066 aa14.56□□□□□ -0.08
CLN6-219ENST00000637329 PHF12Q96QT6 1004 aa14.56□□□□□ -0.08
CLN6-219ENST00000637329 PANX1Q96RD7 426 aa14.56□□□□□ -0.08
CLN6-219ENST00000637329 MACROD1Q9BQ69 325 aa14.56□□□□□ -0.08
CLN6-219ENST00000637329 CPPED1Q9BRF8 314 aaPredicted RBP14.56□□□□□ -0.08
CLN6-219ENST00000637329 ALG2Q9H553 416 aa14.56□□□□□ -0.08
CLN6-219ENST00000637329 NEUROD4Q9HD90 331 aa14.56□□□□□ -0.08
CLN6-219ENST00000637329 FAM60AQ9NP50 221 aa14.56□□□□□ -0.08
CLN6-219ENST00000637329 SOHLH2Q9NX45 425 aa14.56□□□□□ -0.08
CLN6-219ENST00000637329 CMTM6Q9NX76 183 aa14.56□□□□□ -0.08
CLN6-219ENST00000637329 TEX10Q9NXF1 929 aaPredicted RBP14.56□□□□□ -0.08
CLN6-219ENST00000637329 MS4A12Q9NXJ0 267 aa14.56□□□□□ -0.08
CLN6-219ENST00000637329 VAPAQ9P0L0 249 aa14.56□□□□□ -0.08
CLN6-219ENST00000637329 SH3BP4Q9P0V3 963 aa14.56□□□□□ -0.08
CLN6-219ENST00000637329 SLAMF8Q9P0V8 285 aa14.56□□□□□ -0.08
CLN6-219ENST00000637329 ZNF282Q9UDV7 671 aaPredicted RBP14.56□□□□□ -0.08
CLN6-219ENST00000637329 GMEB2Q9UKD1 530 aa14.56□□□□□ -0.08
CLN6-219ENST00000637329 CORO2BQ9UQ03 480 aa14.56□□□□□ -0.08
CLN6-219ENST00000637329 BTBD3Q9Y2F9 522 aa14.56□□□□□ -0.08
CLN6-219ENST00000637329 ASB4Q9Y574 426 aa14.56□□□□□ -0.08
CLN6-219ENST00000637329 CEP250Q9BV73 2442 aa14.56□□□□□ -0.08
CLN6-219ENST00000637329 CHD6Q8TD26 2715 aa14.56□□□□□ -0.08
CLN6-219ENST00000637329 A0A0G2JN53 185 aa14.55□□□□□ -0.08
CLN6-219ENST00000637329 KHNYNO15037 678 aaKnown RBP14.55□□□□□ -0.08
CLN6-219ENST00000637329 B4GAT1O43505 415 aa14.55□□□□□ -0.08
CLN6-219ENST00000637329 B3GALT2O43825 422 aa14.55□□□□□ -0.08
CLN6-219ENST00000637329 STAMBPO95630 424 aa14.55□□□□□ -0.08
CLN6-219ENST00000637329 ATP6V1G2O95670 118 aa14.55□□□□□ -0.08
CLN6-219ENST00000637329 STATHP02808 62 aa14.55□□□□□ -0.08
CLN6-219ENST00000637329 ADRB1P08588 477 aa14.55□□□□□ -0.08
CLN6-219ENST00000637329 ANKRD34CP0C6C1 535 aa14.55□□□□□ -0.08
CLN6-219ENST00000637329 CSF2RBP32927 897 aa14.55□□□□□ -0.08
CLN6-219ENST00000637329 BUD31P41223 144 aaPredicted RBP14.55□□□□□ -0.08
CLN6-219ENST00000637329 DUSP3P51452 185 aaPredicted RBP14.55□□□□□ -0.08
CLN6-219ENST00000637329 EMP3P54852 163 aa14.55□□□□□ -0.08
CLN6-219ENST00000637329 VSX2P58304 361 aaPredicted RBP14.55□□□□□ -0.08
CLN6-219ENST00000637329 RAB8AP61006 207 aa14.55□□□□□ -0.08
CLN6-219ENST00000637329 BTN3A2P78410 334 aa14.55□□□□□ -0.08
CLN6-219ENST00000637329 MC1RQ01726 317 aa14.55□□□□□ -0.08
CLN6-219ENST00000637329 SLAMF1Q13291 335 aa14.55□□□□□ -0.08
CLN6-219ENST00000637329 FLOT2Q14254 428 aa14.55□□□□□ -0.08
CLN6-219ENST00000637329 TRIM25Q14258 630 aaKnown RBP14.55□□□□□ -0.08
CLN6-219ENST00000637329 MLC1Q15049 377 aa14.55□□□□□ -0.08
CLN6-219ENST00000637329 FXNQ16595 210 aa14.55□□□□□ -0.08
CLN6-219ENST00000637329 NDUFA9Q16795 377 aa14.55□□□□□ -0.08
CLN6-219ENST00000637329 PROX2Q3B8N5 592 aa14.55□□□□□ -0.08
CLN6-219ENST00000637329 RUNDC3AQ59EK9 446 aa14.55□□□□□ -0.08
CLN6-219ENST00000637329 RABL3Q5HYI8 236 aa14.55□□□□□ -0.08
CLN6-219ENST00000637329 GARNL3Q5VVW2 1013 aa14.55□□□□□ -0.08
CLN6-219ENST00000637329 ANKRD26P1Q6NSI1 321 aa14.55□□□□□ -0.08
CLN6-219ENST00000637329 DNAJC14Q6Y2X3 702 aaPredicted RBP14.55□□□□□ -0.08
CLN6-219ENST00000637329 ANKRD46Q86W74 232 aa14.55□□□□□ -0.08
CLN6-219ENST00000637329 PTRH1Q86Y79 214 aaKnown RBP14.55□□□□□ -0.08
CLN6-219ENST00000637329 MCATQ8IVS2 390 aaKnown RBP14.55□□□□□ -0.08
CLN6-219ENST00000637329 MSRB3Q8IXL7 192 aa14.55□□□□□ -0.08
CLN6-219ENST00000637329 ARHGEF39Q8N4T4 335 aa14.55□□□□□ -0.08
CLN6-219ENST00000637329 TRIML2Q8N7C3 387 aa14.55□□□□□ -0.08
CLN6-219ENST00000637329 ZCCHC10Q8TBK6 192 aa14.55□□□□□ -0.08
CLN6-219ENST00000637329 STMN2Q93045 179 aa14.55□□□□□ -0.08
CLN6-219ENST00000637329 NPLQ9BXD5 320 aaPredicted RBP14.55□□□□□ -0.08
CLN6-219ENST00000637329 TRIM15Q9C019 465 aa14.55□□□□□ -0.08
CLN6-219ENST00000637329 LYRM4Q9HD34 91 aa14.55□□□□□ -0.08
CLN6-219ENST00000637329 ACSS1Q9NUB1 689 aaPredicted RBP14.55□□□□□ -0.08
CLN6-219ENST00000637329 SLC25A37Q9NYZ2 338 aa14.55□□□□□ -0.08
CLN6-219ENST00000637329 VPS4AQ9UN37 437 aa14.55□□□□□ -0.08
CLN6-219ENST00000637329 PCDHB14Q9Y5E9 798 aa14.55□□□□□ -0.08
CLN6-219ENST00000637329 COL5A1P20908 1838 aaPredicted RBP14.55□□□□□ -0.08
CLN6-219ENST00000637329 MDC1Q14676 2089 aaKnown RBP14.54□□□□□ -0.08
CLN6-219ENST00000637329 GON4LQ3T8J9 2241 aa14.54□□□□□ -0.08
CLN6-219ENST00000637329 IGHV5-51A0A0C4DH38 117 aa14.54□□□□□ -0.08
CLN6-219ENST00000637329 FITM1A5D6W6 292 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 114.5 ms