RNA–Protein interactions for RNA: ENST00000636214.1

PNKP-225, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 805 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-225ENST00000636214 STX4Q12846 297 aa16.74■□□□□ 0.27
PNKP-225ENST00000636214 BMPR2Q13873 1038 aa16.74■□□□□ 0.27
PNKP-225ENST00000636214 TBCCQ15814 346 aa16.74■□□□□ 0.27
PNKP-225ENST00000636214 ADPRMQ3LIE5 342 aa16.74■□□□□ 0.27
PNKP-225ENST00000636214 CCDC91Q7Z6B0 441 aa16.74■□□□□ 0.27
PNKP-225ENST00000636214 MRGPRGQ86SM5 289 aa16.74■□□□□ 0.27
PNKP-225ENST00000636214 EID3Q8N140 333 aa16.74■□□□□ 0.27
PNKP-225ENST00000636214 CYP4Z2PQ8N1L4 340 aa16.74■□□□□ 0.27
PNKP-225ENST00000636214 ZNF808Q8N4W9 903 aaPredicted RBP16.74■□□□□ 0.27
PNKP-225ENST00000636214 NFAM1Q8NET5 270 aaPredicted RBP16.74■□□□□ 0.27
PNKP-225ENST00000636214 NCLNQ969V3 563 aa16.74■□□□□ 0.27
PNKP-225ENST00000636214 WDR34Q96EX3 536 aa16.74■□□□□ 0.27
PNKP-225ENST00000636214 CCDC120Q96HB5 630 aa16.74■□□□□ 0.27
PNKP-225ENST00000636214 FRMD6Q96NE9 622 aa16.74■□□□□ 0.27
PNKP-225ENST00000636214 QRFPRQ96P65 431 aa16.74■□□□□ 0.27
PNKP-225ENST00000636214 DAPP1Q9UN19 280 aa16.74■□□□□ 0.27
PNKP-225ENST00000636214 ENTPD4Q9Y227 616 aa16.74■□□□□ 0.27
PNKP-225ENST00000636214 ACOT9Q9Y305 439 aa16.74■□□□□ 0.27
PNKP-225ENST00000636214 CLCA3PQ9Y6N3 262 aa16.74■□□□□ 0.27
PNKP-225ENST00000636214 A0A087X1B8 175 aa16.73■□□□□ 0.27
PNKP-225ENST00000636214 ARHGAP10A1A4S6 786 aa16.73■□□□□ 0.27
PNKP-225ENST00000636214 ZFAND5O76080 213 aa16.73■□□□□ 0.27
PNKP-225ENST00000636214 SLC35E2BP0CK96 405 aa16.73■□□□□ 0.27
PNKP-225ENST00000636214 EPB42P16452 691 aa16.73■□□□□ 0.27
PNKP-225ENST00000636214 TRHRP34981 398 aaPredicted RBP16.73■□□□□ 0.27
PNKP-225ENST00000636214 PHBP35232 272 aa16.73■□□□□ 0.27
PNKP-225ENST00000636214 SSR4P51571 173 aa16.73■□□□□ 0.27
PNKP-225ENST00000636214 SMSP52788 366 aa16.73■□□□□ 0.27
PNKP-225ENST00000636214 LIM2P55344 173 aa16.73■□□□□ 0.27
PNKP-225ENST00000636214 UAP1Q16222 522 aaPredicted RBP16.73■□□□□ 0.27
PNKP-225ENST00000636214 FAM83EQ2M2I3 478 aa16.73■□□□□ 0.27
PNKP-225ENST00000636214 AP5B1Q2VPB7 878 aa16.73■□□□□ 0.27
PNKP-225ENST00000636214 ZNF468Q5VIY5 522 aaPredicted RBP16.73■□□□□ 0.27
PNKP-225ENST00000636214 MED27Q6P2C8 311 aa16.73■□□□□ 0.27
PNKP-225ENST00000636214 CEP128Q6ZU80 1094 aa16.73■□□□□ 0.27
PNKP-225ENST00000636214 CHSY3Q70JA7 882 aa16.73■□□□□ 0.27
PNKP-225ENST00000636214 MYLK4Q86YV6 388 aaPredicted RBP16.73■□□□□ 0.27
PNKP-225ENST00000636214 C17orf53Q8N3J3 647 aaPredicted RBP16.73■□□□□ 0.27
PNKP-225ENST00000636214 POGLUT1Q8NBL1 392 aa16.73■□□□□ 0.27
PNKP-225ENST00000636214 APCDD1LQ8NCL9 501 aa16.73■□□□□ 0.27
PNKP-225ENST00000636214 C7orf57Q8NEG2 295 aa16.73■□□□□ 0.27
PNKP-225ENST00000636214 DAZLQ92904 295 aaKnown RBP16.73■□□□□ 0.27
PNKP-225ENST00000636214 MRRFQ96E11 262 aaKnown RBP16.73■□□□□ 0.27
PNKP-225ENST00000636214 F2RL3Q96RI0 385 aa16.73■□□□□ 0.27
PNKP-225ENST00000636214 TBCDQ9BTW9 1192 aa16.73■□□□□ 0.27
PNKP-225ENST00000636214 ERVK-11Q9UQG0 969 aa16.73■□□□□ 0.27
PNKP-225ENST00000636214 K7EPI3 171 aa16.72■□□□□ 0.27
PNKP-225ENST00000636214 UBXN8O00124 270 aa16.72■□□□□ 0.27
PNKP-225ENST00000636214 TFECO14948 347 aaPredicted RBP16.72■□□□□ 0.27
PNKP-225ENST00000636214 ITGA10O75578 1167 aa16.72■□□□□ 0.27
PNKP-225ENST00000636214 GFAPP14136 432 aa16.72■□□□□ 0.27
PNKP-225ENST00000636214 TNNI3P19429 210 aa16.72■□□□□ 0.27
PNKP-225ENST00000636214 SSR2P43308 183 aa16.72■□□□□ 0.27
PNKP-225ENST00000636214 RAP1GDS1P52306 607 aa16.72■□□□□ 0.27
PNKP-225ENST00000636214 PHEXP78562 749 aa16.72■□□□□ 0.27
PNKP-225ENST00000636214 ART3Q13508 389 aa16.72■□□□□ 0.27
PNKP-225ENST00000636214 ELAVL1Q15717 326 aaKnown RBP16.72■□□□□ 0.27
PNKP-225ENST00000636214 C3AR1Q16581 482 aa16.72■□□□□ 0.27
PNKP-225ENST00000636214 TMEM35AQ53FP2 167 aa16.72■□□□□ 0.27
PNKP-225ENST00000636214 KLC3Q6P597 504 aa16.72■□□□□ 0.27
PNKP-225ENST00000636214 VN1R5Q7Z5H4 357 aa16.72■□□□□ 0.27
PNKP-225ENST00000636214 SPPL2CQ8IUH8 684 aa16.72■□□□□ 0.27
PNKP-225ENST00000636214 UBTD2Q8WUN7 234 aa16.72■□□□□ 0.27
PNKP-225ENST00000636214 MARVELD3Q96A59 401 aa16.72■□□□□ 0.27
PNKP-225ENST00000636214 TRIM45Q9H8W5 580 aaPredicted RBP16.72■□□□□ 0.27
PNKP-225ENST00000636214 LYRM4Q9HD34 91 aa16.72■□□□□ 0.27
PNKP-225ENST00000636214 TIMMDC1Q9NPL8 285 aa16.72■□□□□ 0.27
PNKP-225ENST00000636214 MTRF1LQ9UGC7 380 aaKnown RBP16.72■□□□□ 0.27
PNKP-225ENST00000636214 ADGRE2Q9UHX3 823 aa16.72■□□□□ 0.27
PNKP-225ENST00000636214 TINAGQ9UJW2 476 aa16.72■□□□□ 0.27
PNKP-225ENST00000636214 ZNF490Q9ULM2 529 aaPredicted RBP16.72■□□□□ 0.27
PNKP-225ENST00000636214 YARS2Q9Y2Z4 477 aaKnown RBP16.72■□□□□ 0.27
PNKP-225ENST00000636214 KLF2Q9Y5W3 355 aaPredicted RBP16.72■□□□□ 0.27
PNKP-225ENST00000636214 PKDREJQ9NTG1 2253 aa16.71■□□□□ 0.27
PNKP-225ENST00000636214 CCDC189A1A4V9 331 aa16.71■□□□□ 0.27
PNKP-225ENST00000636214 A8MVJ9 347 aa16.71■□□□□ 0.27
PNKP-225ENST00000636214 ASNA1O43681 348 aa16.71■□□□□ 0.27
PNKP-225ENST00000636214 CTNSO60931 367 aa16.71■□□□□ 0.27
PNKP-225ENST00000636214 COX7A2P14406 83 aa16.71■□□□□ 0.27
PNKP-225ENST00000636214 PPP2R1BP30154 601 aa16.71■□□□□ 0.27
PNKP-225ENST00000636214 CASP2P42575 452 aa16.71■□□□□ 0.27
PNKP-225ENST00000636214 MEOX1P50221 254 aa16.71■□□□□ 0.27
PNKP-225ENST00000636214 DDX39BQ13838 428 aaKnown RBP16.71■□□□□ 0.27
PNKP-225ENST00000636214 SERTAD2Q14140 314 aa16.71■□□□□ 0.27
PNKP-225ENST00000636214 MROH9Q5TGP6 573 aa16.71■□□□□ 0.27
PNKP-225ENST00000636214 SP5Q6BEB4 398 aaPredicted RBP16.71■□□□□ 0.27
PNKP-225ENST00000636214 ADNP2Q6IQ32 1131 aa16.71■□□□□ 0.27
PNKP-225ENST00000636214 ZDHHC24Q6UX98 284 aa16.71■□□□□ 0.27
PNKP-225ENST00000636214 ISCA2Q86U28 154 aa16.71■□□□□ 0.27
PNKP-225ENST00000636214 CPSF7Q8N684 471 aaKnown RBP16.71■□□□□ 0.27
PNKP-225ENST00000636214 OR14A16Q8NHC5 309 aa16.71■□□□□ 0.27
PNKP-225ENST00000636214 ITLN2Q8WWU7 325 aaPredicted RBP16.71■□□□□ 0.27
PNKP-225ENST00000636214 ASB15Q8WXK1 588 aa16.71■□□□□ 0.27
PNKP-225ENST00000636214 CMTM7Q96FZ5 175 aa16.71■□□□□ 0.27
PNKP-225ENST00000636214 ATOH8Q96SQ7 321 aa16.71■□□□□ 0.27
PNKP-225ENST00000636214 CSF3RQ99062 836 aa16.71■□□□□ 0.27
PNKP-225ENST00000636214 MS4A8Q9BY19 250 aa16.71■□□□□ 0.27
PNKP-225ENST00000636214 HPF1Q9NWY4 346 aa16.71■□□□□ 0.27
PNKP-225ENST00000636214 ESYT3A0FGR9 886 aa16.7■□□□□ 0.26
PNKP-225ENST00000636214 CYR61O00622 381 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms