RNA–Protein interactions for RNA: ENST00000636020.1

CLN6-212, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-212ENST00000636020 SMIM10L1P0DMW3 83 aa16.69■□□□□ 0.26
CLN6-212ENST00000636020 NID1P14543 1247 aa16.69■□□□□ 0.26
CLN6-212ENST00000636020 NPPBP16860 134 aa16.69■□□□□ 0.26
CLN6-212ENST00000636020 FDFT1P37268 417 aa16.69■□□□□ 0.26
CLN6-212ENST00000636020 RWDD2BP57060 319 aa16.69■□□□□ 0.26
CLN6-212ENST00000636020 RAB8AP61006 207 aa16.69■□□□□ 0.26
CLN6-212ENST00000636020 CRADDP78560 199 aa16.69■□□□□ 0.26
CLN6-212ENST00000636020 RGS1Q08116 209 aa16.69■□□□□ 0.26
CLN6-212ENST00000636020 DMTNQ08495 405 aa16.69■□□□□ 0.26
CLN6-212ENST00000636020 CUL1Q13616 776 aa16.69■□□□□ 0.26
CLN6-212ENST00000636020 CAPRIN1Q14444 709 aaKnown RBP16.69■□□□□ 0.26
CLN6-212ENST00000636020 TTLL9Q3SXZ7 439 aa16.69■□□□□ 0.26
CLN6-212ENST00000636020 OPN5Q6U736 354 aa16.69■□□□□ 0.26
CLN6-212ENST00000636020 UBE2R2Q712K3 238 aaPredicted RBP16.69■□□□□ 0.26
CLN6-212ENST00000636020 STRA8Q7Z7C7 330 aa16.69■□□□□ 0.26
CLN6-212ENST00000636020 CA13Q8N1Q1 262 aa16.69■□□□□ 0.26
CLN6-212ENST00000636020 LIX1Q8N485 282 aa16.69■□□□□ 0.26
CLN6-212ENST00000636020 SMIM10Q96HG1 83 aa16.69■□□□□ 0.26
CLN6-212ENST00000636020 TIMP4Q99727 224 aa16.69■□□□□ 0.26
CLN6-212ENST00000636020 ZFP64Q9NPA5 681 aa16.69■□□□□ 0.26
CLN6-212ENST00000636020 ADAP2Q9NPF8 381 aa16.69■□□□□ 0.26
CLN6-212ENST00000636020 QPCTLQ9NXS2 382 aa16.69■□□□□ 0.26
CLN6-212ENST00000636020 GALNT8Q9NY28 637 aa16.69■□□□□ 0.26
CLN6-212ENST00000636020 ADGRE2Q9UHX3 823 aa16.69■□□□□ 0.26
CLN6-212ENST00000636020 DOCK7Q96N67 2140 aa16.69■□□□□ 0.26
CLN6-212ENST00000636020 USF3Q68DE3 2245 aa16.68■□□□□ 0.26
CLN6-212ENST00000636020 TRBC2A0A5B9 178 aa16.68■□□□□ 0.26
CLN6-212ENST00000636020 LRRC3CA6NJW4 275 aa16.68■□□□□ 0.26
CLN6-212ENST00000636020 CD8B2A6NJW9 211 aa16.68■□□□□ 0.26
CLN6-212ENST00000636020 GOLGA8KD6RF30 607 aa16.68■□□□□ 0.26
CLN6-212ENST00000636020 GOLGA8TH3BQL2 631 aa16.68■□□□□ 0.26
CLN6-212ENST00000636020 PHF1O43189 567 aaPredicted RBP16.68■□□□□ 0.26
CLN6-212ENST00000636020 SIAH2O43255 324 aa16.68■□□□□ 0.26
CLN6-212ENST00000636020 PTH2RP49190 550 aa16.68■□□□□ 0.26
CLN6-212ENST00000636020 CRYZQ08257 329 aaKnown RBP16.68■□□□□ 0.26
CLN6-212ENST00000636020 LCTLQ6UWM7 567 aa16.68■□□□□ 0.26
CLN6-212ENST00000636020 HIPK1Q86Z02 1210 aa16.68■□□□□ 0.26
CLN6-212ENST00000636020 RASGEF1CQ8N431 466 aa16.68■□□□□ 0.26
CLN6-212ENST00000636020 ALG3Q92685 438 aa16.68■□□□□ 0.26
CLN6-212ENST00000636020 SGPP1Q9BX95 441 aa16.68■□□□□ 0.26
CLN6-212ENST00000636020 UBTD1Q9HAC8 227 aa16.68■□□□□ 0.26
CLN6-212ENST00000636020 SH2D2AQ9NP31 389 aa16.68■□□□□ 0.26
CLN6-212ENST00000636020 ABHD10Q9NUJ1 306 aa16.68■□□□□ 0.26
CLN6-212ENST00000636020 C6orf203Q9P0P8 240 aaPredicted RBP16.68■□□□□ 0.26
CLN6-212ENST00000636020 KLHL42Q9P2K6 505 aa16.68■□□□□ 0.26
CLN6-212ENST00000636020 BOKQ9UMX3 212 aaPredicted RBP16.68■□□□□ 0.26
CLN6-212ENST00000636020 NINQ8N4C6 2090 aa16.67■□□□□ 0.26
CLN6-212ENST00000636020 C15orf38-AP3S2A0A0A6YYH1 394 aa16.67■□□□□ 0.26
CLN6-212ENST00000636020 MBD3L3A6NE82 208 aaPredicted RBP16.67■□□□□ 0.26
CLN6-212ENST00000636020 E7EVH7 732 aa16.67■□□□□ 0.26
CLN6-212ENST00000636020 PFDN6O15212 129 aa16.67■□□□□ 0.26
CLN6-212ENST00000636020 VAPBO95292 243 aa16.67■□□□□ 0.26
CLN6-212ENST00000636020 HNF4AP41235 474 aa16.67■□□□□ 0.26
CLN6-212ENST00000636020 MAGEA1P43355 309 aa16.67■□□□□ 0.26
CLN6-212ENST00000636020 CCR8P51685 355 aa16.67■□□□□ 0.26
CLN6-212ENST00000636020 TPM4P67936 248 aa16.67■□□□□ 0.26
CLN6-212ENST00000636020 NAE1Q13564 534 aa16.67■□□□□ 0.26
CLN6-212ENST00000636020 BMPR2Q13873 1038 aa16.67■□□□□ 0.26
CLN6-212ENST00000636020 BBS9Q3SYG4 887 aa16.67■□□□□ 0.26
CLN6-212ENST00000636020 SLC22A10Q63ZE4 541 aa16.67■□□□□ 0.26
CLN6-212ENST00000636020 AGTRAPQ6RW13 159 aa16.67■□□□□ 0.26
CLN6-212ENST00000636020 LUZP1Q86V48 1076 aa16.67■□□□□ 0.26
CLN6-212ENST00000636020 TMEM132CQ8N3T6 1108 aa16.67■□□□□ 0.26
CLN6-212ENST00000636020 MBD3L2Q8NHZ7 208 aaPredicted RBP16.67■□□□□ 0.26
CLN6-212ENST00000636020 PRDM14Q9GZV8 571 aa16.67■□□□□ 0.26
CLN6-212ENST00000636020 PROK2Q9HC23 129 aa16.67■□□□□ 0.26
CLN6-212ENST00000636020 PRTFDC1Q9NRG1 225 aa16.67■□□□□ 0.26
CLN6-212ENST00000636020 NDRG3Q9UGV2 375 aa16.67■□□□□ 0.26
CLN6-212ENST00000636020 ZFP69BQ9UJL9 534 aa16.67■□□□□ 0.26
CLN6-212ENST00000636020 TFR2Q9UP52 801 aa16.67■□□□□ 0.26
CLN6-212ENST00000636020 MED16Q9Y2X0 877 aa16.67■□□□□ 0.26
CLN6-212ENST00000636020 TESMINQ9Y4I5 508 aa16.67■□□□□ 0.26
CLN6-212ENST00000636020 CTAGE15A4D2H0 777 aa16.66■□□□□ 0.26
CLN6-212ENST00000636020 GOLGA6L9A6NEM1 432 aa16.66■□□□□ 0.26
CLN6-212ENST00000636020 DEFB108AA8MXU0 73 aa16.66■□□□□ 0.26
CLN6-212ENST00000636020 C4orf51C9J302 202 aa16.66■□□□□ 0.26
CLN6-212ENST00000636020 ENO3P13929 434 aaPredicted RBP16.66■□□□□ 0.26
CLN6-212ENST00000636020 HSD17B7P56937 341 aa16.66■□□□□ 0.26
CLN6-212ENST00000636020 SESN2P58004 480 aaPredicted RBP16.66■□□□□ 0.26
CLN6-212ENST00000636020 RNF4P78317 190 aa16.66■□□□□ 0.26
CLN6-212ENST00000636020 DUSP8Q13202 625 aa16.66■□□□□ 0.26
CLN6-212ENST00000636020 SF3B4Q15427 424 aaKnown RBP eCLIP16.66■□□□□ 0.26
CLN6-212ENST00000636020 ELAVL1Q15717 326 aaKnown RBP16.66■□□□□ 0.26
CLN6-212ENST00000636020 ZNF791Q3KP31 576 aaPredicted RBP16.66■□□□□ 0.26
CLN6-212ENST00000636020 C20orf204Q6ZNR8 217 aa16.66■□□□□ 0.26
CLN6-212ENST00000636020 CTAGE6Q86UF2 777 aa16.66■□□□□ 0.26
CLN6-212ENST00000636020 PM20D2Q8IYS1 436 aa16.66■□□□□ 0.26
CLN6-212ENST00000636020 ZNF321PQ8N8H1 164 aa16.66■□□□□ 0.26
CLN6-212ENST00000636020 MORN4Q8NDC4 146 aa16.66■□□□□ 0.26
CLN6-212ENST00000636020 OR8K3Q8NH51 312 aa16.66■□□□□ 0.26
CLN6-212ENST00000636020 ALKBH8Q96BT7 664 aaKnown RBP16.66■□□□□ 0.26
CLN6-212ENST00000636020 NTNG2Q96CW9 530 aa16.66■□□□□ 0.26
CLN6-212ENST00000636020 KLHL31Q9H511 634 aa16.66■□□□□ 0.26
CLN6-212ENST00000636020 ZNF148Q9UQR1 794 aa16.66■□□□□ 0.26
CLN6-212ENST00000636020 CLCA3PQ9Y6N3 262 aa16.66■□□□□ 0.26
CLN6-212ENST00000636020 ROS1P08922 2347 aa16.65■□□□□ 0.26
CLN6-212ENST00000636020 URADA6NGE7 173 aa16.65■□□□□ 0.26
CLN6-212ENST00000636020 HAX1O00165 279 aa16.65■□□□□ 0.26
CLN6-212ENST00000636020 CTIFO43310 598 aaKnown RBP16.65■□□□□ 0.26
CLN6-212ENST00000636020 ERN1O75460 977 aaKnown RBP16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms