RNA–Protein interactions for RNA: ENST00000635578.1

SMARCB1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 242 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-209ENST00000635578 OR52B6Q8NGF0 335 aa0.94□□□□□ -2.26
SMARCB1-209ENST00000635578 OR10Q1Q8NGQ4 319 aa0.94□□□□□ -2.26
SMARCB1-209ENST00000635578 OR1L3Q8NH93 324 aa0.94□□□□□ -2.26
SMARCB1-209ENST00000635578 RPLP0P6Q8NHW5 317 aa0.94□□□□□ -2.26
SMARCB1-209ENST00000635578 C9orf43Q8TAL5 461 aaPredicted RBP0.94□□□□□ -2.26
SMARCB1-209ENST00000635578 SETD6Q8TBK2 473 aa0.94□□□□□ -2.26
SMARCB1-209ENST00000635578 CD99L2Q8TCZ2 262 aa0.94□□□□□ -2.26
SMARCB1-209ENST00000635578 SLC26A7Q8TE54 656 aa0.94□□□□□ -2.26
SMARCB1-209ENST00000635578 GRK7Q8WTQ7 553 aa0.94□□□□□ -2.26
SMARCB1-209ENST00000635578 APOBEC4Q8WW27 367 aaKnown RBP0.94□□□□□ -2.26
SMARCB1-209ENST00000635578 ROBO4Q8WZ75 1007 aa0.94□□□□□ -2.26
SMARCB1-209ENST00000635578 SLCO2A1Q92959 643 aa0.94□□□□□ -2.26
SMARCB1-209ENST00000635578 SPSB1Q96BD6 273 aa0.94□□□□□ -2.26
SMARCB1-209ENST00000635578 PYCR2Q96C36 320 aa0.94□□□□□ -2.26
SMARCB1-209ENST00000635578 MOCOSQ96EN8 888 aa0.94□□□□□ -2.26
SMARCB1-209ENST00000635578 PGAP3Q96FM1 320 aaPredicted RBP0.94□□□□□ -2.26
SMARCB1-209ENST00000635578 ATXN7L3BQ96GX2 97 aa0.94□□□□□ -2.26
SMARCB1-209ENST00000635578 LINC00615Q96LM1 132 aaPredicted RBP0.94□□□□□ -2.26
SMARCB1-209ENST00000635578 C4orf45Q96LM5 186 aa0.94□□□□□ -2.26
SMARCB1-209ENST00000635578 C10orf90Q96M02 699 aa0.94□□□□□ -2.26
SMARCB1-209ENST00000635578 AGAP4Q96P64 663 aa0.94□□□□□ -2.26
SMARCB1-209ENST00000635578 FEVQ99581 238 aa0.94□□□□□ -2.26
SMARCB1-209ENST00000635578 KATNB1Q9BVA0 655 aa0.94□□□□□ -2.26
SMARCB1-209ENST00000635578 TDRD1Q9BXT4 1180 aaKnown RBP0.94□□□□□ -2.26
SMARCB1-209ENST00000635578 FGFBP2Q9BYJ0 223 aa0.94□□□□□ -2.26
SMARCB1-209ENST00000635578 NACAP1Q9BZK3 213 aa0.94□□□□□ -2.26
SMARCB1-209ENST00000635578 SHARPINQ9H0F6 387 aa0.94□□□□□ -2.26
SMARCB1-209ENST00000635578 SDCBP2Q9H190 292 aa0.94□□□□□ -2.26
SMARCB1-209ENST00000635578 FN3KQ9H479 309 aa0.94□□□□□ -2.26
SMARCB1-209ENST00000635578 DPEP2Q9H4A9 486 aa0.94□□□□□ -2.26
SMARCB1-209ENST00000635578 ANKZF1Q9H8Y5 726 aa0.94□□□□□ -2.26
SMARCB1-209ENST00000635578 ERVMER34-1Q9H9K5 563 aa0.94□□□□□ -2.26
SMARCB1-209ENST00000635578 RPF1Q9H9Y2 349 aaKnown RBP0.94□□□□□ -2.26
SMARCB1-209ENST00000635578 GPN1Q9HCN4 374 aaPredicted RBP0.94□□□□□ -2.26
SMARCB1-209ENST00000635578 GSN-AS1Q9NRJ2 163 aa0.94□□□□□ -2.26
SMARCB1-209ENST00000635578 MAN2C1Q9NTJ4 1040 aa0.94□□□□□ -2.26
SMARCB1-209ENST00000635578 PDRG1Q9NUG6 133 aa0.94□□□□□ -2.26
SMARCB1-209ENST00000635578 C2orf42Q9NWW7 574 aa0.94□□□□□ -2.26
SMARCB1-209ENST00000635578 RNF186Q9NXI6 227 aa0.94□□□□□ -2.26
SMARCB1-209ENST00000635578 MIS18AQ9NYP9 233 aa0.94□□□□□ -2.26
SMARCB1-209ENST00000635578 NKIRAS2Q9NYR9 191 aa0.94□□□□□ -2.26
SMARCB1-209ENST00000635578 ERAP1Q9NZ08 941 aa0.94□□□□□ -2.26
SMARCB1-209ENST00000635578 HACD3Q9P035 362 aa0.94□□□□□ -2.26
SMARCB1-209ENST00000635578 SWAP70Q9UH65 585 aa0.94□□□□□ -2.26
SMARCB1-209ENST00000635578 LNPEPQ9UIQ6 1025 aa0.94□□□□□ -2.26
SMARCB1-209ENST00000635578 ANAPC5Q9UJX4 755 aa0.94□□□□□ -2.26
SMARCB1-209ENST00000635578 ANAPC2Q9UJX6 822 aa0.94□□□□□ -2.26
SMARCB1-209ENST00000635578 MAN1B1Q9UKM7 699 aa0.94□□□□□ -2.26
SMARCB1-209ENST00000635578 POMT2Q9UKY4 750 aa0.94□□□□□ -2.26
SMARCB1-209ENST00000635578 RUVBL2Q9Y230 463 aaKnown RBP0.94□□□□□ -2.26
SMARCB1-209ENST00000635578 WBP11Q9Y2W2 641 aaKnown RBP0.94□□□□□ -2.26
SMARCB1-209ENST00000635578 NSG2Q9Y328 171 aa0.94□□□□□ -2.26
SMARCB1-209ENST00000635578 TTLL3Q9Y4R7 772 aa0.94□□□□□ -2.26
SMARCB1-209ENST00000635578 TRIM17Q9Y577 477 aa0.94□□□□□ -2.26
SMARCB1-209ENST00000635578 COL27A1Q8IZC6 1860 aaPredicted RBP0.94□□□□□ -2.26
SMARCB1-209ENST00000635578 CENPFP49454 3210 aa0.94□□□□□ -2.26
SMARCB1-209ENST00000635578 NPC1L1Q9UHC9 1359 aa0.94□□□□□ -2.26
SMARCB1-209ENST00000635578 TNRC6AQ8NDV7 1962 aaKnown RBP0.94□□□□□ -2.26
SMARCB1-209ENST00000635578 MAP1BP46821 2468 aaKnown RBP0.93□□□□□ -2.26
SMARCB1-209ENST00000635578 A0A087WUV0 522 aaPredicted RBP0.93□□□□□ -2.26
SMARCB1-209ENST00000635578 IQCMA0A1B0GVH7 501 aa0.93□□□□□ -2.26
SMARCB1-209ENST00000635578 A0A1W2PPQ1 181 aa0.93□□□□□ -2.26
SMARCB1-209ENST00000635578 CLRN2A0PK11 232 aa0.93□□□□□ -2.26
SMARCB1-209ENST00000635578 TMEM221A6NGB7 291 aa0.93□□□□□ -2.26
SMARCB1-209ENST00000635578 GLTPD2A6NH11 291 aa0.93□□□□□ -2.26
SMARCB1-209ENST00000635578 MSGN1A6NI15 193 aa0.93□□□□□ -2.26
SMARCB1-209ENST00000635578 A8MVM7 634 aa0.93□□□□□ -2.26
SMARCB1-209ENST00000635578 A8MXK9 166 aa0.93□□□□□ -2.26
SMARCB1-209ENST00000635578 TMCO5BA8MYB1 307 aa0.93□□□□□ -2.26
SMARCB1-209ENST00000635578 TCP10L2B9ZVM9 353 aa0.93□□□□□ -2.26
SMARCB1-209ENST00000635578 PI4K2BG5E9Z4 385 aa0.93□□□□□ -2.26
SMARCB1-209ENST00000635578 H0YAE9 185 aa0.93□□□□□ -2.26
SMARCB1-209ENST00000635578 PDHXO00330 501 aa0.93□□□□□ -2.26
SMARCB1-209ENST00000635578 RTCAO00442 366 aaKnown RBP0.93□□□□□ -2.26
SMARCB1-209ENST00000635578 TFECO14948 347 aaPredicted RBP0.93□□□□□ -2.26
SMARCB1-209ENST00000635578 TEX28O15482 410 aa0.93□□□□□ -2.26
SMARCB1-209ENST00000635578 CYTIPO60759 359 aa0.93□□□□□ -2.26
SMARCB1-209ENST00000635578 PGLSO95336 258 aa0.93□□□□□ -2.26
SMARCB1-209ENST00000635578 PGM3O95394 542 aa0.93□□□□□ -2.26
SMARCB1-209ENST00000635578 CALCAP01258 141 aa0.93□□□□□ -2.26
SMARCB1-209ENST00000635578 ZSCAN5DPP0CG00 497 aa0.93□□□□□ -2.26
SMARCB1-209ENST00000635578 DUX4L4P0CJ87 422 aa0.93□□□□□ -2.26
SMARCB1-209ENST00000635578 THEGLP0DJG4 465 aa0.93□□□□□ -2.26
SMARCB1-209ENST00000635578 ADORA3P0DMS8 318 aa0.93□□□□□ -2.26
SMARCB1-209ENST00000635578 EZRP15311 586 aaKnown RBP0.93□□□□□ -2.26
SMARCB1-209ENST00000635578 EPORP19235 508 aa0.93□□□□□ -2.26
SMARCB1-209ENST00000635578 CYP2A7P20853 494 aa0.93□□□□□ -2.26
SMARCB1-209ENST00000635578 UGT1A4P22310 534 aa0.93□□□□□ -2.26
SMARCB1-209ENST00000635578 AADACP22760 399 aa0.93□□□□□ -2.26
SMARCB1-209ENST00000635578 BDNFP23560 247 aa0.93□□□□□ -2.26
SMARCB1-209ENST00000635578 GIFP27352 417 aa0.93□□□□□ -2.26
SMARCB1-209ENST00000635578 RFC4P35249 363 aa0.93□□□□□ -2.26
SMARCB1-209ENST00000635578 GMPSP49915 693 aaPredicted RBP0.93□□□□□ -2.26
SMARCB1-209ENST00000635578 CAPZA1P52907 286 aa0.93□□□□□ -2.26
SMARCB1-209ENST00000635578 PPP5CP53041 499 aa0.93□□□□□ -2.26
SMARCB1-209ENST00000635578 MTCP1P56278 107 aa0.93□□□□□ -2.26
SMARCB1-209ENST00000635578 TMEM50BP56557 158 aa0.93□□□□□ -2.26
SMARCB1-209ENST00000635578 UBASH3AP57075 661 aa0.93□□□□□ -2.26
SMARCB1-209ENST00000635578 CYCSP99999 105 aaKnown RBP0.93□□□□□ -2.26
SMARCB1-209ENST00000635578 MAT1AQ00266 395 aaKnown RBP0.93□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms