RNA–Protein interactions for RNA: ENST00000630925.1

SDCBP-213, Transcript of syndecan binding protein, humanhuman

TSL 5 BASIC

Gene SDCBP, Length 2,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-213ENST00000630925 CCDC28BQ9BUN5 200 aa4.62□□□□□ -1.67
SDCBP-213ENST00000630925 C1QTNF5Q9BXJ0 243 aa4.62□□□□□ -1.67
SDCBP-213ENST00000630925 KRTAP9-9Q9BYP9 154 aa4.62□□□□□ -1.67
SDCBP-213ENST00000630925 KRTAP9-4Q9BYQ2 154 aa4.62□□□□□ -1.67
SDCBP-213ENST00000630925 ELOVL6Q9H5J4 265 aa4.62□□□□□ -1.67
SDCBP-213ENST00000630925 RANBP3Q9H6Z4 567 aaPredicted RBP4.62□□□□□ -1.67
SDCBP-213ENST00000630925 EQTNQ9NQ60 294 aa4.62□□□□□ -1.67
SDCBP-213ENST00000630925 MTMR4Q9NYA4 1195 aa4.62□□□□□ -1.67
SDCBP-213ENST00000630925 WARS2Q9UGM6 360 aaKnown RBP4.62□□□□□ -1.67
SDCBP-213ENST00000630925 MYO6Q9UM54 1294 aa4.62□□□□□ -1.67
SDCBP-213ENST00000630925 HFM1A2PYH4 1435 aa4.62□□□□□ -1.67
SDCBP-213ENST00000630925 VPS8Q8N3P4 1428 aa4.62□□□□□ -1.67
SDCBP-213ENST00000630925 MGAT4DA6NG13 374 aa4.61□□□□□ -1.67
SDCBP-213ENST00000630925 NPIPA2E9PIF3 369 aa4.61□□□□□ -1.67
SDCBP-213ENST00000630925 E9PLN8 166 aa4.61□□□□□ -1.67
SDCBP-213ENST00000630925 H0YGN5 161 aa4.61□□□□□ -1.67
SDCBP-213ENST00000630925 GPR25O00155 361 aa4.61□□□□□ -1.67
SDCBP-213ENST00000630925 OGG1O15527 345 aa4.61□□□□□ -1.67
SDCBP-213ENST00000630925 PSMD3O43242 534 aa4.61□□□□□ -1.67
SDCBP-213ENST00000630925 NDUFA2O43678 99 aa4.61□□□□□ -1.67
SDCBP-213ENST00000630925 CA3P07451 260 aa4.61□□□□□ -1.67
SDCBP-213ENST00000630925 TRIM49P0CI25 452 aa4.61□□□□□ -1.67
SDCBP-213ENST00000630925 TRIM49CP0CI26 452 aa4.61□□□□□ -1.67
SDCBP-213ENST00000630925 ITGA2P17301 1181 aa4.61□□□□□ -1.67
SDCBP-213ENST00000630925 RAB4AP20338 218 aa4.61□□□□□ -1.67
SDCBP-213ENST00000630925 GSTM3P21266 225 aa4.61□□□□□ -1.67
SDCBP-213ENST00000630925 KCNA3P22001 575 aa4.61□□□□□ -1.67
SDCBP-213ENST00000630925 ELAVL4P26378 380 aaKnown RBP4.61□□□□□ -1.67
SDCBP-213ENST00000630925 PRDX2P32119 198 aa4.61□□□□□ -1.67
SDCBP-213ENST00000630925 CRHR1P34998 444 aa4.61□□□□□ -1.67
SDCBP-213ENST00000630925 ACTR1BP42025 376 aa4.61□□□□□ -1.67
SDCBP-213ENST00000630925 IER3P46695 156 aa4.61□□□□□ -1.67
SDCBP-213ENST00000630925 TOB1P50616 345 aaPredicted RBP4.61□□□□□ -1.67
SDCBP-213ENST00000630925 VAV2P52735 878 aa4.61□□□□□ -1.67
SDCBP-213ENST00000630925 TAS2R50P59544 299 aa4.61□□□□□ -1.67
SDCBP-213ENST00000630925 SIRPAP78324 504 aa4.61□□□□□ -1.67
SDCBP-213ENST00000630925 FGL1Q08830 312 aa4.61□□□□□ -1.67
SDCBP-213ENST00000630925 IFFO1Q0D2I5 559 aa4.61□□□□□ -1.67
SDCBP-213ENST00000630925 DUSP8Q13202 625 aa4.61□□□□□ -1.67
SDCBP-213ENST00000630925 MRPL49Q13405 166 aaKnown RBP4.61□□□□□ -1.67
SDCBP-213ENST00000630925 FAM189A2Q15884 450 aa4.61□□□□□ -1.67
SDCBP-213ENST00000630925 UAP1Q16222 522 aaPredicted RBP4.61□□□□□ -1.67
SDCBP-213ENST00000630925 CPSF6Q16630 551 aaKnown RBP eCLIP4.61□□□□□ -1.67
SDCBP-213ENST00000630925 GOLGA7BQ2TAP0 167 aa4.61□□□□□ -1.67
SDCBP-213ENST00000630925 MGAT5BQ3V5L5 792 aa4.61□□□□□ -1.67
SDCBP-213ENST00000630925 LRRC73Q5JTD7 316 aa4.61□□□□□ -1.67
SDCBP-213ENST00000630925 SERTAD4-AS1Q5TG53 156 aa4.61□□□□□ -1.67
SDCBP-213ENST00000630925 ANKS6Q68DC2 871 aa4.61□□□□□ -1.67
SDCBP-213ENST00000630925 FAM122CQ6P4D5 195 aa4.61□□□□□ -1.67
SDCBP-213ENST00000630925 Q6ZPB1 254 aaPredicted RBP4.61□□□□□ -1.67
SDCBP-213ENST00000630925 POLNQ7Z5Q5 900 aa4.61□□□□□ -1.67
SDCBP-213ENST00000630925 IGDCC3Q8IVU1 814 aa4.61□□□□□ -1.67
SDCBP-213ENST00000630925 LAX1Q8IWV1 398 aa4.61□□□□□ -1.67
SDCBP-213ENST00000630925 ZNF683Q8IZ20 524 aa4.61□□□□□ -1.67
SDCBP-213ENST00000630925 CDK20Q8IZL9 346 aa4.61□□□□□ -1.67
SDCBP-213ENST00000630925 C1orf87Q8N0U7 546 aa4.61□□□□□ -1.67
SDCBP-213ENST00000630925 PROKR2Q8NFJ6 384 aa4.61□□□□□ -1.67
SDCBP-213ENST00000630925 OR51L1Q8NGJ5 315 aa4.61□□□□□ -1.67
SDCBP-213ENST00000630925 OR4A16Q8NH70 328 aa4.61□□□□□ -1.67
SDCBP-213ENST00000630925 GADD45GIP1Q8TAE8 222 aaPredicted RBP4.61□□□□□ -1.67
SDCBP-213ENST00000630925 ZNF473Q8WTR7 871 aaKnown RBP4.61□□□□□ -1.67
SDCBP-213ENST00000630925 SCARB1Q8WTV0 552 aa4.61□□□□□ -1.67
SDCBP-213ENST00000630925 CHPT1Q8WUD6 406 aa4.61□□□□□ -1.67
SDCBP-213ENST00000630925 ASB11Q8WXH4 323 aa4.61□□□□□ -1.67
SDCBP-213ENST00000630925 SEMA4DQ92854 862 aa4.61□□□□□ -1.67
SDCBP-213ENST00000630925 ZNF274Q96GC6 653 aaPredicted RBP4.61□□□□□ -1.67
SDCBP-213ENST00000630925 ZBTB45Q96K62 511 aaPredicted RBP4.61□□□□□ -1.67
SDCBP-213ENST00000630925 TSSK3Q96PN8 268 aa4.61□□□□□ -1.67
SDCBP-213ENST00000630925 VKORC1Q9BQB6 163 aa4.61□□□□□ -1.67
SDCBP-213ENST00000630925 TM6SF2Q9BZW4 377 aa4.61□□□□□ -1.67
SDCBP-213ENST00000630925 C6orf62Q9GZU0 229 aaPredicted RBP4.61□□□□□ -1.67
SDCBP-213ENST00000630925 RAB18Q9NP72 206 aa4.61□□□□□ -1.67
SDCBP-213ENST00000630925 PLCXD1Q9NUJ7 323 aa4.61□□□□□ -1.67
SDCBP-213ENST00000630925 IMP3Q9NV31 184 aaKnown RBP4.61□□□□□ -1.67
SDCBP-213ENST00000630925 BABAM1Q9NWV8 329 aa4.61□□□□□ -1.67
SDCBP-213ENST00000630925 RHBDL2Q9NX52 303 aa4.61□□□□□ -1.67
SDCBP-213ENST00000630925 SLC2A8Q9NY64 477 aa4.61□□□□□ -1.67
SDCBP-213ENST00000630925 MIS18AQ9NYP9 233 aa4.61□□□□□ -1.67
SDCBP-213ENST00000630925 TFCP2L1Q9NZI6 479 aa4.61□□□□□ -1.67
SDCBP-213ENST00000630925 NARFQ9UHQ1 456 aa4.61□□□□□ -1.67
SDCBP-213ENST00000630925 TINAGQ9UJW2 476 aa4.61□□□□□ -1.67
SDCBP-213ENST00000630925 EXOGQ9Y2C4 368 aaKnown RBP4.61□□□□□ -1.67
SDCBP-213ENST00000630925 SLC27A6Q9Y2P4 619 aa4.61□□□□□ -1.67
SDCBP-213ENST00000630925 SH3GLB1Q9Y371 365 aa4.61□□□□□ -1.67
SDCBP-213ENST00000630925 HEG1Q9ULI3 1381 aa4.61□□□□□ -1.67
SDCBP-213ENST00000630925 LRRC37A3O60309 1634 aa4.61□□□□□ -1.67
SDCBP-213ENST00000630925 A0A0A6YYH2 397 aa4.61□□□□□ -1.67
SDCBP-213ENST00000630925 METTL21EPA6NDL7 271 aa4.61□□□□□ -1.67
SDCBP-213ENST00000630925 A6NJ64 397 aa4.61□□□□□ -1.67
SDCBP-213ENST00000630925 C9JVG2 144 aa4.61□□□□□ -1.67
SDCBP-213ENST00000630925 PRAMEF26H0Y7S4 382 aa4.61□□□□□ -1.67
SDCBP-213ENST00000630925 KLRC4-KLRK1H3BQV0 150 aa4.61□□□□□ -1.67
SDCBP-213ENST00000630925 PDXKO00764 312 aa4.61□□□□□ -1.67
SDCBP-213ENST00000630925 CLDN4O14493 209 aa4.61□□□□□ -1.67
SDCBP-213ENST00000630925 SDHDO14521 159 aa4.61□□□□□ -1.67
SDCBP-213ENST00000630925 TOX3O15405 576 aaPredicted RBP4.61□□□□□ -1.67
SDCBP-213ENST00000630925 PRAMEF11O60813 436 aa4.61□□□□□ -1.67
SDCBP-213ENST00000630925 ARHGEF15O94989 841 aa4.61□□□□□ -1.67
SDCBP-213ENST00000630925 ASS1P00966 412 aaKnown RBP4.61□□□□□ -1.67
SDCBP-213ENST00000630925 FTH1P02794 183 aa4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms