RNA–Protein interactions for RNA: ENST00000627109.2

CTNNA1-244, Transcript of catenin alpha 1, humanhuman

TSL 5 BASIC

Gene CTNNA1, Length 3,831 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-244ENST00000627109 DTD2Q96FN9 168 aa6.86□□□□□ -1.31
CTNNA1-244ENST00000627109 COX4I2Q96KJ9 171 aa6.86□□□□□ -1.31
CTNNA1-244ENST00000627109 DHRS1Q96LJ7 313 aa6.86□□□□□ -1.31
CTNNA1-244ENST00000627109 MROQ9BYG7 248 aa6.86□□□□□ -1.31
CTNNA1-244ENST00000627109 C1GALT1Q9NS00 363 aa6.86□□□□□ -1.31
CTNNA1-244ENST00000627109 DNAAF2Q9NVR5 837 aaKnown RBP6.86□□□□□ -1.31
CTNNA1-244ENST00000627109 CLEC1BQ9P126 229 aa6.86□□□□□ -1.31
CTNNA1-244ENST00000627109 IL36AQ9UHA7 158 aa6.86□□□□□ -1.31
CTNNA1-244ENST00000627109 DAPK2Q9UIK4 370 aa6.86□□□□□ -1.31
CTNNA1-244ENST00000627109 TPRKBQ9Y3C4 175 aa6.86□□□□□ -1.31
CTNNA1-244ENST00000627109 LYVE1Q9Y5Y7 322 aa6.86□□□□□ -1.31
CTNNA1-244ENST00000627109 SPTBN2O15020 2390 aa6.86□□□□□ -1.31
CTNNA1-244ENST00000627109 C2orf16Q68DN1 1984 aa6.86□□□□□ -1.31
CTNNA1-244ENST00000627109 NEDD8-MDP1E9PL57 170 aa6.86□□□□□ -1.31
CTNNA1-244ENST00000627109 HOXC11O43248 304 aaPredicted RBP6.86□□□□□ -1.31
CTNNA1-244ENST00000627109 ATG13O75143 517 aa6.86□□□□□ -1.31
CTNNA1-244ENST00000627109 LEFTY1O75610 366 aa6.86□□□□□ -1.31
CTNNA1-244ENST00000627109 FURINP09958 794 aa6.86□□□□□ -1.31
CTNNA1-244ENST00000627109 HSMCR30P0CW71 290 aa6.86□□□□□ -1.31
CTNNA1-244ENST00000627109 TYRP14679 529 aa6.86□□□□□ -1.31
CTNNA1-244ENST00000627109 NPPBP16860 134 aa6.86□□□□□ -1.31
CTNNA1-244ENST00000627109 SOAT1P35610 550 aa6.86□□□□□ -1.31
CTNNA1-244ENST00000627109 ETV3P41162 512 aa6.86□□□□□ -1.31
CTNNA1-244ENST00000627109 IDH2P48735 452 aaKnown RBP6.86□□□□□ -1.31
CTNNA1-244ENST00000627109 CTSCP53634 463 aa6.86□□□□□ -1.31
CTNNA1-244ENST00000627109 BPIFB3P59826 476 aa6.86□□□□□ -1.31
CTNNA1-244ENST00000627109 DMPKQ09013 629 aa6.86□□□□□ -1.31
CTNNA1-244ENST00000627109 DSG2Q14126 1118 aa6.86□□□□□ -1.31
CTNNA1-244ENST00000627109 OXA1LQ15070 435 aa6.86□□□□□ -1.31
CTNNA1-244ENST00000627109 ADPRMQ3LIE5 342 aa6.86□□□□□ -1.31
CTNNA1-244ENST00000627109 ZNF385BQ569K4 471 aa6.86□□□□□ -1.31
CTNNA1-244ENST00000627109 SLC30A8Q8IWU4 369 aa6.86□□□□□ -1.31
CTNNA1-244ENST00000627109 SYTL1Q8IYJ3 562 aa6.86□□□□□ -1.31
CTNNA1-244ENST00000627109 OR52N2Q8NGI0 321 aa6.86□□□□□ -1.31
CTNNA1-244ENST00000627109 OR52J3Q8NH60 311 aa6.86□□□□□ -1.31
CTNNA1-244ENST00000627109 HUS1BQ8NHY5 278 aa6.86□□□□□ -1.31
CTNNA1-244ENST00000627109 REPS1Q96D71 796 aa6.86□□□□□ -1.31
CTNNA1-244ENST00000627109 ZSWIM3Q96MP5 696 aa6.86□□□□□ -1.31
CTNNA1-244ENST00000627109 APOL4Q9BPW4 351 aa6.86□□□□□ -1.31
CTNNA1-244ENST00000627109 DPH2Q9BQC3 489 aaPredicted RBP6.86□□□□□ -1.31
CTNNA1-244ENST00000627109 FBRSQ9HAH7 460 aa6.86□□□□□ -1.31
CTNNA1-244ENST00000627109 LMCD1Q9NZU5 365 aa6.86□□□□□ -1.31
CTNNA1-244ENST00000627109 NDUFAF4Q9P032 175 aa6.86□□□□□ -1.31
CTNNA1-244ENST00000627109 PCDHGA2Q9Y5H1 932 aa6.86□□□□□ -1.31
CTNNA1-244ENST00000627109 ICMTO60725 284 aa6.86□□□□□ -1.31
CTNNA1-244ENST00000627109 POU1F1P28069 291 aa6.86□□□□□ -1.31
CTNNA1-244ENST00000627109 GGT2P36268 569 aa6.86□□□□□ -1.31
CTNNA1-244ENST00000627109 LTBRP36941 435 aa6.86□□□□□ -1.31
CTNNA1-244ENST00000627109 CRATP43155 626 aa6.86□□□□□ -1.31
CTNNA1-244ENST00000627109 SEPHS1P49903 392 aa6.86□□□□□ -1.31
CTNNA1-244ENST00000627109 CYP4F2P78329 520 aa6.86□□□□□ -1.31
CTNNA1-244ENST00000627109 NPRL3Q12980 569 aa6.86□□□□□ -1.31
CTNNA1-244ENST00000627109 NAE1Q13564 534 aa6.86□□□□□ -1.31
CTNNA1-244ENST00000627109 TBCEQ15813 527 aaPredicted RBP6.86□□□□□ -1.31
CTNNA1-244ENST00000627109 CCSMST1Q4G0I0 132 aa6.86□□□□□ -1.31
CTNNA1-244ENST00000627109 SLCO6A1Q86UG4 719 aa6.86□□□□□ -1.31
CTNNA1-244ENST00000627109 METTL4Q8N3J2 472 aa6.86□□□□□ -1.31
CTNNA1-244ENST00000627109 ZNF366Q8N895 744 aa6.86□□□□□ -1.31
CTNNA1-244ENST00000627109 FCGR1BQ92637 280 aa6.86□□□□□ -1.31
CTNNA1-244ENST00000627109 RIOK2Q9BVS4 552 aaKnown RBP6.86□□□□□ -1.31
CTNNA1-244ENST00000627109 REEP4Q9H6H4 257 aa6.86□□□□□ -1.31
CTNNA1-244ENST00000627109 REEP1Q9H902 201 aa6.86□□□□□ -1.31
CTNNA1-244ENST00000627109 TRIM39Q9HCM9 518 aa6.86□□□□□ -1.31
CTNNA1-244ENST00000627109 DMRT3Q9NQL9 472 aa6.86□□□□□ -1.31
CTNNA1-244ENST00000627109 THUMPD1Q9NXG2 353 aaKnown RBP6.86□□□□□ -1.31
CTNNA1-244ENST00000627109 SELENONQ9NZV5 590 aa6.86□□□□□ -1.31
CTNNA1-244ENST00000627109 ZNF229Q9UJW7 825 aa6.86□□□□□ -1.31
CTNNA1-244ENST00000627109 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP6.86□□□□□ -1.31
CTNNA1-244ENST00000627109 WBP11Q9Y2W2 641 aaKnown RBP6.86□□□□□ -1.31
CTNNA1-244ENST00000627109 PCDHGA12O60330 932 aa6.85□□□□□ -1.31
CTNNA1-244ENST00000627109 TBX6O95947 436 aaPredicted RBP6.85□□□□□ -1.31
CTNNA1-244ENST00000627109 GBAP04062 536 aa6.85□□□□□ -1.31
CTNNA1-244ENST00000627109 DDX5P17844 614 aaKnown RBP6.85□□□□□ -1.31
CTNNA1-244ENST00000627109 GDI1P31150 447 aa6.85□□□□□ -1.31
CTNNA1-244ENST00000627109 IDUAP35475 653 aa6.85□□□□□ -1.31
CTNNA1-244ENST00000627109 HPCAL1P37235 193 aa6.85□□□□□ -1.31
CTNNA1-244ENST00000627109 RPL3P39023 403 aaKnown RBP6.85□□□□□ -1.31
CTNNA1-244ENST00000627109 NNMTP40261 264 aa6.85□□□□□ -1.31
CTNNA1-244ENST00000627109 PRIM2P49643 509 aa6.85□□□□□ -1.31
CTNNA1-244ENST00000627109 CLCA4Q14CN2 919 aa6.85□□□□□ -1.31
CTNNA1-244ENST00000627109 GAB4Q2WGN9 574 aa6.85□□□□□ -1.31
CTNNA1-244ENST00000627109 ZNF770Q6IQ21 691 aaPredicted RBP6.85□□□□□ -1.31
CTNNA1-244ENST00000627109 NIPAL1Q6NVV3 410 aa6.85□□□□□ -1.31
CTNNA1-244ENST00000627109 Q6ZVL8 140 aa6.85□□□□□ -1.31
CTNNA1-244ENST00000627109 VN1R5Q7Z5H4 357 aa6.85□□□□□ -1.31
CTNNA1-244ENST00000627109 VTCN1Q7Z7D3 282 aa6.85□□□□□ -1.31
CTNNA1-244ENST00000627109 C2orf73Q8N5S3 287 aaPredicted RBP6.85□□□□□ -1.31
CTNNA1-244ENST00000627109 TTC29Q8NA56 475 aaPredicted RBP6.85□□□□□ -1.31
CTNNA1-244ENST00000627109 TMIEQ8NEW7 156 aa6.85□□□□□ -1.31
CTNNA1-244ENST00000627109 PSMA8Q8TAA3 256 aa6.85□□□□□ -1.31
CTNNA1-244ENST00000627109 WFIKKN2Q8TEU8 576 aa6.85□□□□□ -1.31
CTNNA1-244ENST00000627109 SETD7Q8WTS6 366 aaKnown RBP6.85□□□□□ -1.31
CTNNA1-244ENST00000627109 ZNF480Q8WV37 535 aa6.85□□□□□ -1.31
CTNNA1-244ENST00000627109 C17orf50Q8WW18 174 aa6.85□□□□□ -1.31
CTNNA1-244ENST00000627109 TMEM159Q96B96 161 aa6.85□□□□□ -1.31
CTNNA1-244ENST00000627109 PPP1R16AQ96I34 528 aa6.85□□□□□ -1.31
CTNNA1-244ENST00000627109 FUZQ9BT04 418 aa6.85□□□□□ -1.31
CTNNA1-244ENST00000627109 EFCAB11Q9BUY7 163 aa6.85□□□□□ -1.31
CTNNA1-244ENST00000627109 ZNF717Q9BY31 904 aaPredicted RBP6.85□□□□□ -1.31
CTNNA1-244ENST00000627109 SLIRPQ9GZT3 109 aaKnown RBP6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms