RNA–Protein interactions for RNA: ENST00000625216.2

PNKP-217, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 629 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-217ENST00000625216 ACTR8Q9H981 624 aa11.96□□□□□ -0.49
PNKP-217ENST00000625216 TRPC4Q9UBN4 977 aa11.96□□□□□ -0.49
PNKP-217ENST00000625216 HEY2Q9UBP5 337 aa11.96□□□□□ -0.49
PNKP-217ENST00000625216 C3orf18Q9UK00 162 aa11.96□□□□□ -0.49
PNKP-217ENST00000625216 VPS4AQ9UN37 437 aa11.96□□□□□ -0.49
PNKP-217ENST00000625216 MED13Q9UHV7 2174 aa11.96□□□□□ -0.5
PNKP-217ENST00000625216 A0A1W2PQ72 361 aa11.95□□□□□ -0.5
PNKP-217ENST00000625216 TRPC5OSA6NMA1 111 aa11.95□□□□□ -0.5
PNKP-217ENST00000625216 FFAR3O14843 346 aa11.95□□□□□ -0.5
PNKP-217ENST00000625216 GPR42O15529 346 aa11.95□□□□□ -0.5
PNKP-217ENST00000625216 FOXS1O43638 330 aa11.95□□□□□ -0.5
PNKP-217ENST00000625216 CRCPO75575 148 aa11.95□□□□□ -0.5
PNKP-217ENST00000625216 CLDN9O95484 217 aa11.95□□□□□ -0.5
PNKP-217ENST00000625216 HPP00738 406 aa11.95□□□□□ -0.5
PNKP-217ENST00000625216 CYC1P08574 325 aa11.95□□□□□ -0.5
PNKP-217ENST00000625216 ACPPP15309 386 aa11.95□□□□□ -0.5
PNKP-217ENST00000625216 CXCR2P25025 360 aa11.95□□□□□ -0.5
PNKP-217ENST00000625216 ITGA3P26006 1051 aa11.95□□□□□ -0.5
PNKP-217ENST00000625216 HMOX2P30519 316 aa11.95□□□□□ -0.5
PNKP-217ENST00000625216 EMP2P54851 167 aa11.95□□□□□ -0.5
PNKP-217ENST00000625216 PCDH1Q08174 1060 aa11.95□□□□□ -0.5
PNKP-217ENST00000625216 CHIT1Q13231 466 aa11.95□□□□□ -0.5
PNKP-217ENST00000625216 RAPSNQ13702 412 aa11.95□□□□□ -0.5
PNKP-217ENST00000625216 DOC2AQ14183 400 aa11.95□□□□□ -0.5
PNKP-217ENST00000625216 INPP5JQ15735 1006 aaPredicted RBP11.95□□□□□ -0.5
PNKP-217ENST00000625216 LSM12Q3MHD2 195 aaKnown RBP11.95□□□□□ -0.5
PNKP-217ENST00000625216 VWA2Q5GFL6 755 aa11.95□□□□□ -0.5
PNKP-217ENST00000625216 AGAP7PQ5VUJ5 663 aa11.95□□□□□ -0.5
PNKP-217ENST00000625216 SCIMPQ6UWF3 145 aa11.95□□□□□ -0.5
PNKP-217ENST00000625216 TMPRSS11BQ86T26 416 aa11.95□□□□□ -0.5
PNKP-217ENST00000625216 MYLK4Q86YV6 388 aaPredicted RBP11.95□□□□□ -0.5
PNKP-217ENST00000625216 PLD3Q8IV08 490 aa11.95□□□□□ -0.5
PNKP-217ENST00000625216 TMEM151BQ8IW70 566 aa11.95□□□□□ -0.5
PNKP-217ENST00000625216 DTWD1Q8N5C7 304 aa11.95□□□□□ -0.5
PNKP-217ENST00000625216 ABHD11Q8NFV4 315 aa11.95□□□□□ -0.5
PNKP-217ENST00000625216 METTL6Q8TCB7 284 aa11.95□□□□□ -0.5
PNKP-217ENST00000625216 NEIL2Q969S2 332 aa11.95□□□□□ -0.5
PNKP-217ENST00000625216 AGAP4Q96P64 663 aa11.95□□□□□ -0.5
PNKP-217ENST00000625216 SARGQ9BW04 601 aa11.95□□□□□ -0.5
PNKP-217ENST00000625216 YIPF2Q9BWQ6 316 aa11.95□□□□□ -0.5
PNKP-217ENST00000625216 MFRPQ9BY79 579 aa11.95□□□□□ -0.5
PNKP-217ENST00000625216 SLC29A3Q9BZD2 475 aa11.95□□□□□ -0.5
PNKP-217ENST00000625216 NMUR2Q9GZQ4 415 aa11.95□□□□□ -0.5
PNKP-217ENST00000625216 LHPPQ9H008 270 aa11.95□□□□□ -0.5
PNKP-217ENST00000625216 SPNS1Q9H2V7 528 aa11.95□□□□□ -0.5
PNKP-217ENST00000625216 SYNPO2LQ9H987 977 aa11.95□□□□□ -0.5
PNKP-217ENST00000625216 TCF7L2Q9NQB0 619 aa11.95□□□□□ -0.5
PNKP-217ENST00000625216 GPRC5BQ9NZH0 403 aa11.95□□□□□ -0.5
PNKP-217ENST00000625216 GIMAP2Q9UG22 337 aa11.95□□□□□ -0.5
PNKP-217ENST00000625216 B3GNT3Q9Y2A9 372 aa11.95□□□□□ -0.5
PNKP-217ENST00000625216 DYRK1BQ9Y463 629 aa11.95□□□□□ -0.5
PNKP-217ENST00000625216 SETXQ7Z333 2677 aaKnown RBP11.94□□□□□ -0.5
PNKP-217ENST00000625216 A0A0A6YYC8 382 aaPredicted RBP11.94□□□□□ -0.5
PNKP-217ENST00000625216 ERICH4A6NGS2 130 aa11.94□□□□□ -0.5
PNKP-217ENST00000625216 IDSB3KWA1 339 aa11.94□□□□□ -0.5
PNKP-217ENST00000625216 E9PBE3 544 aa11.94□□□□□ -0.5
PNKP-217ENST00000625216 I3L1I5 382 aaPredicted RBP11.94□□□□□ -0.5
PNKP-217ENST00000625216 MANBAO00462 879 aa11.94□□□□□ -0.5
PNKP-217ENST00000625216 FCHO1O14526 889 aa11.94□□□□□ -0.5
PNKP-217ENST00000625216 CLGNO14967 610 aa11.94□□□□□ -0.5
PNKP-217ENST00000625216 DCTN3O75935 186 aa11.94□□□□□ -0.5
PNKP-217ENST00000625216 WFS1O76024 890 aa11.94□□□□□ -0.5
PNKP-217ENST00000625216 NSA2O95478 260 aaKnown RBP11.94□□□□□ -0.5
PNKP-217ENST00000625216 LINC00032P0C843 101 aa11.94□□□□□ -0.5
PNKP-217ENST00000625216 CDH1P12830 882 aa11.94□□□□□ -0.5
PNKP-217ENST00000625216 CCR8P51685 355 aa11.94□□□□□ -0.5
PNKP-217ENST00000625216 IRF8Q02556 426 aa11.94□□□□□ -0.5
PNKP-217ENST00000625216 UBAP2LQ14157 1087 aaKnown RBP11.94□□□□□ -0.5
PNKP-217ENST00000625216 CPSF6Q16630 551 aaKnown RBP eCLIP11.94□□□□□ -0.5
PNKP-217ENST00000625216 ZSCAN26Q16670 478 aa11.94□□□□□ -0.5
PNKP-217ENST00000625216 XKR6Q5GH73 641 aa11.94□□□□□ -0.5
PNKP-217ENST00000625216 CATSPEREQ5SY80 951 aa11.94□□□□□ -0.5
PNKP-217ENST00000625216 TMEM198Q66K66 360 aa11.94□□□□□ -0.5
PNKP-217ENST00000625216 GRHL2Q6ISB3 625 aa11.94□□□□□ -0.5
PNKP-217ENST00000625216 IGFL2Q6UWQ7 119 aa11.94□□□□□ -0.5
PNKP-217ENST00000625216 SLCO4C1Q6ZQN7 724 aa11.94□□□□□ -0.5
PNKP-217ENST00000625216 RNF165Q6ZSG1 346 aa11.94□□□□□ -0.5
PNKP-217ENST00000625216 ACAD11Q709F0 780 aa11.94□□□□□ -0.5
PNKP-217ENST00000625216 NDUFAF7Q7L592 441 aa11.94□□□□□ -0.5
PNKP-217ENST00000625216 VN1R4Q7Z5H5 301 aa11.94□□□□□ -0.5
PNKP-217ENST00000625216 LAPTM4BQ86VI4 370 aa11.94□□□□□ -0.5
PNKP-217ENST00000625216 DDIASQ8IXT1 998 aa11.94□□□□□ -0.5
PNKP-217ENST00000625216 TBC1D19Q8N5T2 526 aa11.94□□□□□ -0.5
PNKP-217ENST00000625216 AMER3Q8N944 861 aa11.94□□□□□ -0.5
PNKP-217ENST00000625216 Q8NA96 180 aa11.94□□□□□ -0.5
PNKP-217ENST00000625216 OR4K1Q8NGD4 311 aa11.94□□□□□ -0.5
PNKP-217ENST00000625216 OR2T11Q8NH01 316 aa11.94□□□□□ -0.5
PNKP-217ENST00000625216 SLC5A11Q8WWX8 675 aa11.94□□□□□ -0.5
PNKP-217ENST00000625216 ERP27Q96DN0 273 aa11.94□□□□□ -0.5
PNKP-217ENST00000625216 TM4SF19Q96DZ7 209 aa11.94□□□□□ -0.5
PNKP-217ENST00000625216 WDR34Q96EX3 536 aa11.94□□□□□ -0.5
PNKP-217ENST00000625216 RILPQ96NA2 401 aa11.94□□□□□ -0.5
PNKP-217ENST00000625216 HBEGFQ99075 208 aa11.94□□□□□ -0.5
PNKP-217ENST00000625216 CCDC28BQ9BUN5 200 aa11.94□□□□□ -0.5
PNKP-217ENST00000625216 MYLK2Q9H1R3 596 aa11.94□□□□□ -0.5
PNKP-217ENST00000625216 FARSBQ9NSD9 589 aaKnown RBP11.94□□□□□ -0.5
PNKP-217ENST00000625216 KCNE2Q9Y6J6 123 aa11.94□□□□□ -0.5
PNKP-217ENST00000625216 FER1L5A0AVI2 2057 aa11.94□□□□□ -0.5
PNKP-217ENST00000625216 MDC1Q14676 2089 aaKnown RBP11.93□□□□□ -0.5
PNKP-217ENST00000625216 ATP6AP2A0A1C7CYW4 349 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms