RNA–Protein interactions for RNA: ENST00000622138.4

TRIM49B-202, Transcript of tripartite motif containing 49B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM49B, Length 2,162 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49B-202ENST00000622138 PTAFRP25105 342 aa7.2□□□□□ -1.26
TRIM49B-202ENST00000622138 CD96P40200 585 aa7.2□□□□□ -1.26
TRIM49B-202ENST00000622138 RFC3P40938 356 aa7.2□□□□□ -1.26
TRIM49B-202ENST00000622138 MAGEA2P43356 314 aa7.2□□□□□ -1.26
TRIM49B-202ENST00000622138 ZFP36L2P47974 494 aaKnown RBP7.2□□□□□ -1.26
TRIM49B-202ENST00000622138 LHX1P48742 406 aa7.2□□□□□ -1.26
TRIM49B-202ENST00000622138 VEGFCP49767 419 aa7.2□□□□□ -1.26
TRIM49B-202ENST00000622138 DAPP51397 102 aa7.2□□□□□ -1.26
TRIM49B-202ENST00000622138 GPR143P51810 404 aa7.2□□□□□ -1.26
TRIM49B-202ENST00000622138 FOXA1P55317 472 aa7.2□□□□□ -1.26
TRIM49B-202ENST00000622138 CDC42EP1Q00587 391 aa7.2□□□□□ -1.26
TRIM49B-202ENST00000622138 NFKB2Q00653 900 aa7.2□□□□□ -1.26
TRIM49B-202ENST00000622138 TIAL1Q01085 375 aaKnown RBP eCLIP7.2□□□□□ -1.26
TRIM49B-202ENST00000622138 DSC2Q02487 901 aa7.2□□□□□ -1.26
TRIM49B-202ENST00000622138 ZNF33AQ06730 810 aa7.2□□□□□ -1.26
TRIM49B-202ENST00000622138 TEAD4Q15561 434 aa7.2□□□□□ -1.26
TRIM49B-202ENST00000622138 MICBQ29980 383 aa7.2□□□□□ -1.26
TRIM49B-202ENST00000622138 EIF2S3LQ2VIR3 472 aaKnown RBP7.2□□□□□ -1.26
TRIM49B-202ENST00000622138 ZNF528Q3MIS6 628 aa7.2□□□□□ -1.26
TRIM49B-202ENST00000622138 UNC50Q53HI1 259 aa7.2□□□□□ -1.26
TRIM49B-202ENST00000622138 TCTE1Q5JU00 501 aa7.2□□□□□ -1.26
TRIM49B-202ENST00000622138 C10orf62Q5T681 223 aaPredicted RBP7.2□□□□□ -1.26
TRIM49B-202ENST00000622138 LDLRAD1Q5T700 205 aa7.2□□□□□ -1.26
TRIM49B-202ENST00000622138 CPZQ66K79 652 aa7.2□□□□□ -1.26
TRIM49B-202ENST00000622138 ALKBH2Q6NS38 261 aa7.2□□□□□ -1.26
TRIM49B-202ENST00000622138 CD300LGQ6UXG3 332 aa7.2□□□□□ -1.26
TRIM49B-202ENST00000622138 GALNT5Q7Z7M9 940 aa7.2□□□□□ -1.26
TRIM49B-202ENST00000622138 SCD5Q86SK9 330 aa7.2□□□□□ -1.26
TRIM49B-202ENST00000622138 ZNF655Q8N720 491 aaPredicted RBP7.2□□□□□ -1.26
TRIM49B-202ENST00000622138 FAM86B1Q8N7N1 296 aa7.2□□□□□ -1.26
TRIM49B-202ENST00000622138 CLDN22Q8N7P3 220 aa7.2□□□□□ -1.26
TRIM49B-202ENST00000622138 ZNF548Q8NEK5 533 aaPredicted RBP7.2□□□□□ -1.26
TRIM49B-202ENST00000622138 OR11H4Q8NGC9 324 aa7.2□□□□□ -1.26
TRIM49B-202ENST00000622138 PUM2Q8TB72 1066 aaKnown RBP eCLIP7.2□□□□□ -1.26
TRIM49B-202ENST00000622138 TWIST2Q8WVJ9 160 aa7.2□□□□□ -1.26
TRIM49B-202ENST00000622138 GTF3AQ92664 365 aaKnown RBP7.2□□□□□ -1.26
TRIM49B-202ENST00000622138 ZBED6CLQ96FA7 236 aaPredicted RBP7.2□□□□□ -1.26
TRIM49B-202ENST00000622138 DIRAS2Q96HU8 199 aa7.2□□□□□ -1.26
TRIM49B-202ENST00000622138 ITCHQ96J02 903 aa7.2□□□□□ -1.26
TRIM49B-202ENST00000622138 MS4A4AQ96JQ5 239 aa7.2□□□□□ -1.26
TRIM49B-202ENST00000622138 COQ10AQ96MF6 247 aa7.2□□□□□ -1.26
TRIM49B-202ENST00000622138 NSUN5Q96P11 429 aaKnown RBP7.2□□□□□ -1.26
TRIM49B-202ENST00000622138 KCNA7Q96RP8 456 aa7.2□□□□□ -1.26
TRIM49B-202ENST00000622138 SLC29A3Q9BZD2 475 aa7.2□□□□□ -1.26
TRIM49B-202ENST00000622138 NKX6-2Q9C056 277 aaPredicted RBP7.2□□□□□ -1.26
TRIM49B-202ENST00000622138 DNTTIP1Q9H147 329 aa7.2□□□□□ -1.26
TRIM49B-202ENST00000622138 MIXL1Q9H2W2 232 aa7.2□□□□□ -1.26
TRIM49B-202ENST00000622138 AASSQ9UDR5 926 aa7.2□□□□□ -1.26
TRIM49B-202ENST00000622138 LIMD1Q9UGP4 676 aa7.2□□□□□ -1.26
TRIM49B-202ENST00000622138 CLCA3PQ9Y6N3 262 aa7.2□□□□□ -1.26
TRIM49B-202ENST00000622138 CDH10Q9Y6N8 788 aa7.2□□□□□ -1.26
TRIM49B-202ENST00000622138 MYO16Q9Y6X6 1858 aa7.2□□□□□ -1.26
TRIM49B-202ENST00000622138 A0A096LPI6 279 aa7.19□□□□□ -1.26
TRIM49B-202ENST00000622138 A0A1B0GW55 424 aa7.19□□□□□ -1.26
TRIM49B-202ENST00000622138 ARL5CA6NH57 179 aa7.19□□□□□ -1.26
TRIM49B-202ENST00000622138 FAM74A7A6NL05 159 aa7.19□□□□□ -1.26
TRIM49B-202ENST00000622138 ZNF729A6NN14 1252 aaPredicted RBP7.19□□□□□ -1.26
TRIM49B-202ENST00000622138 J3KR12 359 aa7.19□□□□□ -1.26
TRIM49B-202ENST00000622138 IFRD1O00458 451 aaPredicted RBP7.19□□□□□ -1.26
TRIM49B-202ENST00000622138 PDCD5O14737 125 aa7.19□□□□□ -1.26
TRIM49B-202ENST00000622138 SCAMP3O14828 347 aaKnown RBP7.19□□□□□ -1.26
TRIM49B-202ENST00000622138 PIP5K1BO14986 540 aa7.19□□□□□ -1.26
TRIM49B-202ENST00000622138 PCDHGA12O60330 932 aa7.19□□□□□ -1.26
TRIM49B-202ENST00000622138 PLOD3O60568 738 aa7.19□□□□□ -1.26
TRIM49B-202ENST00000622138 HPGDSO60760 199 aa7.19□□□□□ -1.26
TRIM49B-202ENST00000622138 EIF3GO75821 320 aaKnown RBP eCLIP7.19□□□□□ -1.26
TRIM49B-202ENST00000622138 SIX3O95343 332 aaPredicted RBP7.19□□□□□ -1.26
TRIM49B-202ENST00000622138 DHFRP00374 187 aa7.19□□□□□ -1.26
TRIM49B-202ENST00000622138 PRR35P0CG20 571 aa7.19□□□□□ -1.26
TRIM49B-202ENST00000622138 DUX4L2P0CJ85 424 aa7.19□□□□□ -1.26
TRIM49B-202ENST00000622138 DUX4L3P0CJ86 424 aa7.19□□□□□ -1.26
TRIM49B-202ENST00000622138 DUX4L4P0CJ87 422 aa7.19□□□□□ -1.26
TRIM49B-202ENST00000622138 DUX4L5P0CJ88 424 aa7.19□□□□□ -1.26
TRIM49B-202ENST00000622138 DUX4L6P0CJ89 424 aa7.19□□□□□ -1.26
TRIM49B-202ENST00000622138 DUX4L7P0CJ90 424 aa7.19□□□□□ -1.26
TRIM49B-202ENST00000622138 SLC2A2P11168 524 aaPredicted RBP7.19□□□□□ -1.26
TRIM49B-202ENST00000622138 ZNF37AP17032 561 aaPredicted RBP7.19□□□□□ -1.26
TRIM49B-202ENST00000622138 FPR1P21462 350 aa7.19□□□□□ -1.26
TRIM49B-202ENST00000622138 DNASE1P24855 282 aa7.19□□□□□ -1.26
TRIM49B-202ENST00000622138 C21orf33P30042 268 aaPredicted RBP7.19□□□□□ -1.26
TRIM49B-202ENST00000622138 HOXA9P31269 272 aa7.19□□□□□ -1.26
TRIM49B-202ENST00000622138 ATP5C1P36542 298 aaKnown RBP7.19□□□□□ -1.26
TRIM49B-202ENST00000622138 SPAM1P38567 509 aa7.19□□□□□ -1.26
TRIM49B-202ENST00000622138 RPS19P39019 145 aaKnown RBP7.19□□□□□ -1.26
TRIM49B-202ENST00000622138 SLC19A1P41440 591 aa7.19□□□□□ -1.26
TRIM49B-202ENST00000622138 CD86P42081 329 aa7.19□□□□□ -1.26
TRIM49B-202ENST00000622138 PGDP52209 483 aa7.19□□□□□ -1.26
TRIM49B-202ENST00000622138 POLR2JP52435 117 aaKnown RBP7.19□□□□□ -1.26
TRIM49B-202ENST00000622138 CAPZA1P52907 286 aa7.19□□□□□ -1.26
TRIM49B-202ENST00000622138 PRKG2Q13237 762 aa7.19□□□□□ -1.26
TRIM49B-202ENST00000622138 PTPRCAPQ14761 206 aa7.19□□□□□ -1.26
TRIM49B-202ENST00000622138 SLC14A2Q15849 920 aa7.19□□□□□ -1.26
TRIM49B-202ENST00000622138 TSTQ16762 297 aaKnown RBP7.19□□□□□ -1.26
TRIM49B-202ENST00000622138 FAM74A3Q4VXF1 159 aa7.19□□□□□ -1.26
TRIM49B-202ENST00000622138 ZNF678Q5SXM1 525 aa7.19□□□□□ -1.26
TRIM49B-202ENST00000622138 SLC25A25Q6KCM7 469 aa7.19□□□□□ -1.26
TRIM49B-202ENST00000622138 ZNF549Q6P9A3 640 aa7.19□□□□□ -1.26
TRIM49B-202ENST00000622138 DLEU7Q6UYE1 221 aa7.19□□□□□ -1.26
TRIM49B-202ENST00000622138 DET1Q7L5Y6 550 aa7.19□□□□□ -1.26
TRIM49B-202ENST00000622138 ISCA2Q86U28 154 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 127.9 ms