RNA–Protein interactions for RNA: ENST00000621990.4

PDPN-212, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDPN, Length 2,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-212ENST00000621990 OR5AK3PQ8NH89 298 aa9□□□□□ -0.97
PDPN-212ENST00000621990 CXorf40AQ8TE69 158 aa9□□□□□ -0.97
PDPN-212ENST00000621990 PHF10Q8WUB8 498 aaKnown RBP9□□□□□ -0.97
PDPN-212ENST00000621990 MS4A8Q9BY19 250 aa9□□□□□ -0.97
PDPN-212ENST00000621990 WDR12Q9GZL7 423 aaKnown RBP9□□□□□ -0.97
PDPN-212ENST00000621990 CXorf36Q9H7Y0 433 aa9□□□□□ -0.97
PDPN-212ENST00000621990 DYRK4Q9NR20 520 aa9□□□□□ -0.97
PDPN-212ENST00000621990 SLC23A2Q9UGH3 650 aa9□□□□□ -0.97
PDPN-212ENST00000621990 ENPP4Q9Y6X5 453 aa9□□□□□ -0.97
PDPN-212ENST00000621990 PMF1-BGLAPU3KQ54 211 aa9□□□□□ -0.97
PDPN-212ENST00000621990 PLXND1Q9Y4D7 1925 aa9□□□□□ -0.97
PDPN-212ENST00000621990 CLCA1A8K7I4 914 aa8.99□□□□□ -0.97
PDPN-212ENST00000621990 RPN2P04844 631 aa8.99□□□□□ -0.97
PDPN-212ENST00000621990 RHCEP18577 417 aa8.99□□□□□ -0.97
PDPN-212ENST00000621990 CBLP22681 906 aa8.99□□□□□ -0.97
PDPN-212ENST00000621990 PSMB9P28065 219 aa8.99□□□□□ -0.97
PDPN-212ENST00000621990 CDH12P55289 794 aa8.99□□□□□ -0.97
PDPN-212ENST00000621990 DSTNP60981 165 aa8.99□□□□□ -0.97
PDPN-212ENST00000621990 REEP5Q00765 189 aa8.99□□□□□ -0.97
PDPN-212ENST00000621990 SPIBQ01892 262 aa8.99□□□□□ -0.97
PDPN-212ENST00000621990 ZNF770Q6IQ21 691 aaPredicted RBP8.99□□□□□ -0.97
PDPN-212ENST00000621990 REEP3Q6NUK4 255 aa8.99□□□□□ -0.97
PDPN-212ENST00000621990 Q6ZPB1 254 aaPredicted RBP8.99□□□□□ -0.97
PDPN-212ENST00000621990 ZNF554Q86TJ5 538 aa8.99□□□□□ -0.97
PDPN-212ENST00000621990 SLCO6A1Q86UG4 719 aa8.99□□□□□ -0.97
PDPN-212ENST00000621990 CCDC103Q8IW40 242 aa8.99□□□□□ -0.97
PDPN-212ENST00000621990 MMP21Q8N119 569 aa8.99□□□□□ -0.97
PDPN-212ENST00000621990 PSMA8Q8TAA3 256 aa8.99□□□□□ -0.97
PDPN-212ENST00000621990 S100ZQ8WXG8 99 aa8.99□□□□□ -0.97
PDPN-212ENST00000621990 OR5P2Q8WZ92 322 aa8.99□□□□□ -0.97
PDPN-212ENST00000621990 HERVK_113Q902F9 699 aa8.99□□□□□ -0.97
PDPN-212ENST00000621990 TFGQ92734 400 aaPredicted RBP8.99□□□□□ -0.97
PDPN-212ENST00000621990 SMARCD2Q92925 531 aa8.99□□□□□ -0.97
PDPN-212ENST00000621990 ZFYVE19Q96K21 471 aa8.99□□□□□ -0.97
PDPN-212ENST00000621990 DACH2Q96NX9 599 aa8.99□□□□□ -0.97
PDPN-212ENST00000621990 NIPSNAP1Q9BPW8 284 aa8.99□□□□□ -0.97
PDPN-212ENST00000621990 COPS4Q9BT78 406 aa8.99□□□□□ -0.97
PDPN-212ENST00000621990 SORBS1Q9BX66 1292 aaKnown RBP8.99□□□□□ -0.97
PDPN-212ENST00000621990 TMEM121BQ9BXQ6 578 aaPredicted RBP8.99□□□□□ -0.97
PDPN-212ENST00000621990 ITPAQ9BY32 194 aa8.99□□□□□ -0.97
PDPN-212ENST00000621990 PCBD2Q9H0N5 130 aa8.99□□□□□ -0.97
PDPN-212ENST00000621990 HMG20AQ9NP66 347 aa8.99□□□□□ -0.97
PDPN-212ENST00000621990 SLAMF7Q9NQ25 335 aa8.99□□□□□ -0.97
PDPN-212ENST00000621990 MIEF1Q9NQG6 463 aa8.99□□□□□ -0.97
PDPN-212ENST00000621990 ZNF226Q9NYT6 803 aa8.99□□□□□ -0.97
PDPN-212ENST00000621990 SPATA7Q9P0W8 599 aa8.99□□□□□ -0.97
PDPN-212ENST00000621990 PLAGL1Q9UM63 463 aa8.99□□□□□ -0.97
PDPN-212ENST00000621990 TMEM98Q9Y2Y6 226 aa8.99□□□□□ -0.97
PDPN-212ENST00000621990 ZNF451Q9Y4E5 1061 aa8.99□□□□□ -0.97
PDPN-212ENST00000621990 ATG2AQ2TAZ0 1938 aa8.99□□□□□ -0.97
PDPN-212ENST00000621990 GPR89AB7ZAQ6 455 aa8.99□□□□□ -0.97
PDPN-212ENST00000621990 C1QTNF3-AMACRE9PGA6 284 aa8.99□□□□□ -0.97
PDPN-212ENST00000621990 CACNB4O00305 520 aaPredicted RBP8.99□□□□□ -0.97
PDPN-212ENST00000621990 VIPP01282 170 aa8.99□□□□□ -0.97
PDPN-212ENST00000621990 CDK1P06493 297 aa8.99□□□□□ -0.97
PDPN-212ENST00000621990 GPR89BP0CG08 455 aa8.99□□□□□ -0.97
PDPN-212ENST00000621990 CXCR2P25025 360 aa8.99□□□□□ -0.97
PDPN-212ENST00000621990 PCBP4P57723 403 aaKnown RBP8.99□□□□□ -0.97
PDPN-212ENST00000621990 CDK3Q00526 305 aa8.99□□□□□ -0.97
PDPN-212ENST00000621990 OCA2Q04671 838 aa8.99□□□□□ -0.97
PDPN-212ENST00000621990 AGERQ15109 404 aa8.99□□□□□ -0.97
PDPN-212ENST00000621990 DGUOKQ16854 277 aa8.99□□□□□ -0.97
PDPN-212ENST00000621990 PSRC1Q6PGN9 363 aaPredicted RBP8.99□□□□□ -0.97
PDPN-212ENST00000621990 CCDC81Q6ZN84 652 aa8.99□□□□□ -0.97
PDPN-212ENST00000621990 ZBTB46Q86UZ6 589 aa8.99□□□□□ -0.97
PDPN-212ENST00000621990 LRRTM4Q86VH4 590 aa8.99□□□□□ -0.97
PDPN-212ENST00000621990 C17orf64Q86WR6 236 aa8.99□□□□□ -0.97
PDPN-212ENST00000621990 HEATR4Q86WZ0 1026 aa8.99□□□□□ -0.97
PDPN-212ENST00000621990 MMAAQ8IVH4 418 aaKnown RBP8.99□□□□□ -0.97
PDPN-212ENST00000621990 P3H2Q8IVL5 708 aa8.99□□□□□ -0.97
PDPN-212ENST00000621990 DEPDC4Q8N2C3 294 aa8.99□□□□□ -0.97
PDPN-212ENST00000621990 CENPSQ8N2Z9 138 aa8.99□□□□□ -0.97
PDPN-212ENST00000621990 MFSD4AQ8N468 514 aa8.99□□□□□ -0.97
PDPN-212ENST00000621990 SMG7Q92540 1137 aaKnown RBP8.99□□□□□ -0.97
PDPN-212ENST00000621990 BADQ92934 168 aa8.99□□□□□ -0.97
PDPN-212ENST00000621990 MYDGFQ969H8 173 aa8.99□□□□□ -0.97
PDPN-212ENST00000621990 ABTB1Q969K4 478 aaPredicted RBP8.99□□□□□ -0.97
PDPN-212ENST00000621990 TM4SF18Q96CE8 201 aa8.99□□□□□ -0.97
PDPN-212ENST00000621990 AIF1LQ9BQI0 150 aa8.99□□□□□ -0.97
PDPN-212ENST00000621990 NLNQ9BYT8 704 aa8.99□□□□□ -0.97
PDPN-212ENST00000621990 SLIRPQ9GZT3 109 aaKnown RBP8.99□□□□□ -0.97
PDPN-212ENST00000621990 TRPV4Q9HBA0 871 aa8.99□□□□□ -0.97
PDPN-212ENST00000621990 ANKHQ9HCJ1 492 aa8.99□□□□□ -0.97
PDPN-212ENST00000621990 NEUROD4Q9HD90 331 aa8.99□□□□□ -0.97
PDPN-212ENST00000621990 LHX9Q9NQ69 397 aa8.99□□□□□ -0.97
PDPN-212ENST00000621990 RHBDL2Q9NX52 303 aa8.99□□□□□ -0.97
PDPN-212ENST00000621990 OBP2AQ9NY56 170 aa8.99□□□□□ -0.97
PDPN-212ENST00000621990 OSGIN1Q9UJX0 560 aa8.99□□□□□ -0.97
PDPN-212ENST00000621990 HCN2Q9UL51 889 aa8.99□□□□□ -0.97
PDPN-212ENST00000621990 HCN4Q9Y3Q4 1203 aa8.99□□□□□ -0.97
PDPN-212ENST00000621990 A0A1W2PPV9 198 aa8.98□□□□□ -0.97
PDPN-212ENST00000621990 M0R3G1 203 aa8.98□□□□□ -0.97
PDPN-212ENST00000621990 CAPN5O15484 640 aaPredicted RBP8.98□□□□□ -0.97
PDPN-212ENST00000621990 LCKP06239 509 aa8.98□□□□□ -0.97
PDPN-212ENST00000621990 TEAD1P28347 426 aa8.98□□□□□ -0.97
PDPN-212ENST00000621990 IL12RB1P42701 662 aa8.98□□□□□ -0.97
PDPN-212ENST00000621990 VBP1P61758 197 aa8.98□□□□□ -0.97
PDPN-212ENST00000621990 CNTN1Q12860 1018 aa8.98□□□□□ -0.97
PDPN-212ENST00000621990 DGCR6Q14129 220 aa8.98□□□□□ -0.97
PDPN-212ENST00000621990 RGS21Q2M5E4 152 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms