RNA–Protein interactions for RNA: ENST00000621856.1

SPAST-204, Transcript of spastin, humanhuman

TSL 1 (best) BASIC

Gene SPAST, Length 1,715 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-204ENST00000621856 ERMP1Q7Z2K6 904 aa20.37■□□□□ 0.85
SPAST-204ENST00000621856 GPR155Q7Z3F1 870 aa20.37■□□□□ 0.85
SPAST-204ENST00000621856 AMIGO2Q86SJ2 522 aa20.37■□□□□ 0.85
SPAST-204ENST00000621856 WDR5BQ86VZ2 330 aa20.37■□□□□ 0.85
SPAST-204ENST00000621856 ZZZ3Q8IYH5 903 aa20.37■□□□□ 0.85
SPAST-204ENST00000621856 ZCCHC10Q8TBK6 192 aa20.37■□□□□ 0.85
SPAST-204ENST00000621856 OR5P2Q8WZ92 322 aa20.37■□□□□ 0.85
SPAST-204ENST00000621856 ZNF764Q96H86 408 aaPredicted RBP20.37■□□□□ 0.85
SPAST-204ENST00000621856 UCK1Q9HA47 277 aa20.37■□□□□ 0.85
SPAST-204ENST00000621856 UCKL1Q9NWZ5 548 aa20.37■□□□□ 0.85
SPAST-204ENST00000621856 ASB4Q9Y574 426 aa20.37■□□□□ 0.85
SPAST-204ENST00000621856 CACNA1IQ9P0X4 2223 aa20.37■□□□□ 0.85
SPAST-204ENST00000621856 LAMTOR5O43504 91 aa20.36■□□□□ 0.85
SPAST-204ENST00000621856 PROS1P07225 676 aa20.36■□□□□ 0.85
SPAST-204ENST00000621856 CDH3P22223 829 aa20.36■□□□□ 0.85
SPAST-204ENST00000621856 MANFP55145 182 aaKnown RBP20.36■□□□□ 0.85
SPAST-204ENST00000621856 MRM1Q6IN84 353 aaKnown RBP20.36■□□□□ 0.85
SPAST-204ENST00000621856 FRMPD2BQ6IN97 320 aa20.36■□□□□ 0.85
SPAST-204ENST00000621856 HMBOX1Q6NT76 420 aa20.36■□□□□ 0.85
SPAST-204ENST00000621856 RNF44Q7L0R7 432 aa20.36■□□□□ 0.85
SPAST-204ENST00000621856 DGLUCYQ7Z3D6 616 aa20.36■□□□□ 0.85
SPAST-204ENST00000621856 ADCY4Q8NFM4 1077 aa20.36■□□□□ 0.85
SPAST-204ENST00000621856 FBXO30Q8TB52 745 aa20.36■□□□□ 0.85
SPAST-204ENST00000621856 UTP15Q8TED0 518 aaKnown RBP20.36■□□□□ 0.85
SPAST-204ENST00000621856 UCN3Q969E3 161 aa20.36■□□□□ 0.85
SPAST-204ENST00000621856 SPATA9Q9BWV2 254 aa20.36■□□□□ 0.85
SPAST-204ENST00000621856 SEMA6CQ9H3T2 930 aa20.36■□□□□ 0.85
SPAST-204ENST00000621856 PRMT8Q9NR22 394 aaPredicted RBP20.36■□□□□ 0.85
SPAST-204ENST00000621856 LYARQ9NX58 379 aaKnown RBP20.36■□□□□ 0.85
SPAST-204ENST00000621856 GMEB1Q9Y692 573 aa20.36■□□□□ 0.85
SPAST-204ENST00000621856 LOC105369274A0A096LPK9 316 aa20.36■□□□□ 0.85
SPAST-204ENST00000621856 LOC102723532A0A0G2JNH3 316 aa20.36■□□□□ 0.85
SPAST-204ENST00000621856 LILRA5A6NI73 299 aa20.36■□□□□ 0.85
SPAST-204ENST00000621856 H0YGG7 62 aa20.36■□□□□ 0.85
SPAST-204ENST00000621856 KCNK5O95279 499 aa20.36■□□□□ 0.85
SPAST-204ENST00000621856 EIF2S1P05198 315 aaKnown RBP20.36■□□□□ 0.85
SPAST-204ENST00000621856 FCGR1AP12314 374 aa20.36■□□□□ 0.85
SPAST-204ENST00000621856 ACADSP16219 412 aa20.36■□□□□ 0.85
SPAST-204ENST00000621856 FASP25445 335 aa20.36■□□□□ 0.85
SPAST-204ENST00000621856 ARF3P61204 181 aaPredicted RBP20.36■□□□□ 0.85
SPAST-204ENST00000621856 RGNQ15493 299 aa20.36■□□□□ 0.85
SPAST-204ENST00000621856 VMACQ2NL98 169 aa20.36■□□□□ 0.85
SPAST-204ENST00000621856 FAM98BQ52LJ0 330 aaKnown RBP20.36■□□□□ 0.85
SPAST-204ENST00000621856 SFT2D3Q587I9 215 aa20.36■□□□□ 0.85
SPAST-204ENST00000621856 DDX59Q5T1V6 619 aaKnown RBP eCLIP20.36■□□□□ 0.85
SPAST-204ENST00000621856 IRGCQ6NXR0 463 aa20.36■□□□□ 0.85
SPAST-204ENST00000621856 OR4N4Q8N0Y3 316 aa20.36■□□□□ 0.85
SPAST-204ENST00000621856 RNF145Q96MT1 663 aa20.36■□□□□ 0.85
SPAST-204ENST00000621856 ROGDIQ9GZN7 287 aa20.36■□□□□ 0.85
SPAST-204ENST00000621856 EHD3Q9NZN3 535 aa20.36■□□□□ 0.85
SPAST-204ENST00000621856 ACSL6Q9UKU0 697 aa20.36■□□□□ 0.85
SPAST-204ENST00000621856 SNX8Q9Y5X2 465 aa20.36■□□□□ 0.85
SPAST-204ENST00000621856 ATP6V1C1P21283 382 aa20.35■□□□□ 0.85
SPAST-204ENST00000621856 SRSF5Q13243 272 aaKnown RBP20.35■□□□□ 0.85
SPAST-204ENST00000621856 SUZ12Q15022 739 aaKnown RBP20.35■□□□□ 0.85
SPAST-204ENST00000621856 C14orf28Q4W4Y0 310 aa20.35■□□□□ 0.85
SPAST-204ENST00000621856 OGFOD3Q6PK18 319 aa20.35■□□□□ 0.85
SPAST-204ENST00000621856 C17orf82Q86X59 251 aaPredicted RBP20.35■□□□□ 0.85
SPAST-204ENST00000621856 PDSS2Q86YH6 399 aa20.35■□□□□ 0.85
SPAST-204ENST00000621856 ZNF655Q8N720 491 aaPredicted RBP20.35■□□□□ 0.85
SPAST-204ENST00000621856 PAPD5Q8NDF8 572 aaKnown RBP20.35■□□□□ 0.85
SPAST-204ENST00000621856 OR52E4Q8NGH9 312 aa20.35■□□□□ 0.85
SPAST-204ENST00000621856 OR5AK3PQ8NH89 298 aa20.35■□□□□ 0.85
SPAST-204ENST00000621856 NETO1Q8TDF5 533 aa20.35■□□□□ 0.85
SPAST-204ENST00000621856 ZBED6CLQ96FA7 236 aaPredicted RBP20.35■□□□□ 0.85
SPAST-204ENST00000621856 NAF1Q96HR8 494 aaKnown RBP20.35■□□□□ 0.85
SPAST-204ENST00000621856 ZNF570Q96NI8 536 aa20.35■□□□□ 0.85
SPAST-204ENST00000621856 NECAB3Q96P71 396 aaPredicted RBP20.35■□□□□ 0.85
SPAST-204ENST00000621856 DPH2Q9BQC3 489 aaPredicted RBP20.35■□□□□ 0.85
SPAST-204ENST00000621856 UGT2B28Q9BY64 529 aa20.35■□□□□ 0.85
SPAST-204ENST00000621856 NLNQ9BYT8 704 aa20.35■□□□□ 0.85
SPAST-204ENST00000621856 IL21RQ9HBE5 538 aa20.35■□□□□ 0.85
SPAST-204ENST00000621856 SLAMF7Q9NQ25 335 aa20.35■□□□□ 0.85
SPAST-204ENST00000621856 UTS2RQ9UKP6 389 aa20.35■□□□□ 0.85
SPAST-204ENST00000621856 ATG4BQ9Y4P1 393 aa20.35■□□□□ 0.85
SPAST-204ENST00000621856 A0A1B0GTW7 788 aa20.34■□□□□ 0.85
SPAST-204ENST00000621856 A0A1W2PR48 441 aa20.34■□□□□ 0.85
SPAST-204ENST00000621856 SH3BP5O60239 455 aa20.34■□□□□ 0.85
SPAST-204ENST00000621856 PRKRAO75569 313 aaKnown RBP20.34■□□□□ 0.85
SPAST-204ENST00000621856 RETP07949 1114 aa20.34■□□□□ 0.85
SPAST-204ENST00000621856 GNSP15586 552 aa20.34■□□□□ 0.85
SPAST-204ENST00000621856 ST6GAL1P15907 406 aa20.34■□□□□ 0.85
SPAST-204ENST00000621856 UQCRC2P22695 453 aa20.34■□□□□ 0.85
SPAST-204ENST00000621856 CRATP43155 626 aa20.34■□□□□ 0.85
SPAST-204ENST00000621856 CHRNB3Q05901 458 aa20.34■□□□□ 0.85
SPAST-204ENST00000621856 PTOV1Q86YD1 416 aa20.34■□□□□ 0.85
SPAST-204ENST00000621856 ICA1LQ8NDH6 482 aa20.34■□□□□ 0.85
SPAST-204ENST00000621856 OR52N2Q8NGI0 321 aa20.34■□□□□ 0.85
SPAST-204ENST00000621856 EDAQ92838 391 aa20.34■□□□□ 0.85
SPAST-204ENST00000621856 EME1Q96AY2 570 aa20.34■□□□□ 0.85
SPAST-204ENST00000621856 CCDC3Q9BQI4 270 aa20.34■□□□□ 0.85
SPAST-204ENST00000621856 RAD21L1Q9H4I0 556 aa20.34■□□□□ 0.85
SPAST-204ENST00000621856 CXorf36Q9H7Y0 433 aa20.34■□□□□ 0.85
SPAST-204ENST00000621856 TAS2R7Q9NYW3 318 aa20.34■□□□□ 0.85
SPAST-204ENST00000621856 SNX11Q9Y5W9 270 aa20.34■□□□□ 0.85
SPAST-204ENST00000621856 GLOD5A6NK44 160 aa20.33■□□□□ 0.85
SPAST-204ENST00000621856 RHPN2P1A8MT19 583 aa20.33■□□□□ 0.85
SPAST-204ENST00000621856 KRT75O95678 551 aa20.33■□□□□ 0.85
SPAST-204ENST00000621856 AIFM1O95831 613 aa20.33■□□□□ 0.85
SPAST-204ENST00000621856 SERPINA1P01009 418 aa20.33■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms