RNA–Protein interactions for RNA: ENST00000620996.4

VTA1-205, Transcript of vesicle trafficking 1, humanhuman

TSL 3 BASIC

Gene VTA1, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-205ENST00000620996 SOX1O00570 391 aaPredicted RBP9.46□□□□□ -0.89
VTA1-205ENST00000620996 NOBOXO60393 691 aa9.46□□□□□ -0.89
VTA1-205ENST00000620996 GPR37L1O60883 481 aa9.46□□□□□ -0.89
VTA1-205ENST00000620996 CCNDBP1O95273 360 aa9.46□□□□□ -0.89
VTA1-205ENST00000620996 IGHV4-34P06331 123 aa9.46□□□□□ -0.89
VTA1-205ENST00000620996 F3P13726 295 aa9.46□□□□□ -0.89
VTA1-205ENST00000620996 IL9P15248 144 aa9.46□□□□□ -0.89
VTA1-205ENST00000620996 MAGP20916 626 aa9.46□□□□□ -0.89
VTA1-205ENST00000620996 BSGP35613 385 aa9.46□□□□□ -0.89
VTA1-205ENST00000620996 RABIFP47224 123 aa9.46□□□□□ -0.89
VTA1-205ENST00000620996 RGNQ15493 299 aa9.46□□□□□ -0.89
VTA1-205ENST00000620996 OR4C11Q6IEV9 310 aa9.46□□□□□ -0.89
VTA1-205ENST00000620996 WASH2PQ6VEQ5 465 aa9.46□□□□□ -0.89
VTA1-205ENST00000620996 SERPINA11Q86U17 422 aa9.46□□□□□ -0.89
VTA1-205ENST00000620996 ZDHHC13Q8IUH4 622 aa9.46□□□□□ -0.89
VTA1-205ENST00000620996 ZDHHC21Q8IVQ6 265 aa9.46□□□□□ -0.89
VTA1-205ENST00000620996 FAM47BQ8NA70 645 aa9.46□□□□□ -0.89
VTA1-205ENST00000620996 ZFP90Q8TF47 636 aa9.46□□□□□ -0.89
VTA1-205ENST00000620996 PYURFQ96I23 114 aa9.46□□□□□ -0.89
VTA1-205ENST00000620996 FBXL20Q96IG2 436 aa9.46□□□□□ -0.89
VTA1-205ENST00000620996 SLC6A18Q96N87 628 aa9.46□□□□□ -0.89
VTA1-205ENST00000620996 NLNQ9BYT8 704 aa9.46□□□□□ -0.89
VTA1-205ENST00000620996 TAS2R9Q9NYW1 312 aa9.46□□□□□ -0.89
VTA1-205ENST00000620996 SNX11Q9Y5W9 270 aa9.46□□□□□ -0.89
VTA1-205ENST00000620996 TRBC2A0A5B9 178 aa9.46□□□□□ -0.9
VTA1-205ENST00000620996 SHISA7A6NL88 538 aa9.46□□□□□ -0.9
VTA1-205ENST00000620996 FAM170BA6NMN3 283 aa9.46□□□□□ -0.9
VTA1-205ENST00000620996 G3V2T6 193 aa9.46□□□□□ -0.9
VTA1-205ENST00000620996 PLOD2O00469 737 aa9.46□□□□□ -0.9
VTA1-205ENST00000620996 DENRO43583 198 aaKnown RBP9.46□□□□□ -0.9
VTA1-205ENST00000620996 TBX6O95947 436 aaPredicted RBP9.46□□□□□ -0.9
VTA1-205ENST00000620996 CHRNB1P11230 501 aa9.46□□□□□ -0.9
VTA1-205ENST00000620996 GLULP15104 373 aa9.46□□□□□ -0.9
VTA1-205ENST00000620996 PPIBP23284 216 aaKnown RBP9.46□□□□□ -0.9
VTA1-205ENST00000620996 NDUFS1P28331 727 aa9.46□□□□□ -0.9
VTA1-205ENST00000620996 CD6P30203 668 aa9.46□□□□□ -0.9
VTA1-205ENST00000620996 PRKAG1P54619 331 aa9.46□□□□□ -0.9
VTA1-205ENST00000620996 ARPC4P59998 168 aa9.46□□□□□ -0.9
VTA1-205ENST00000620996 TP53BP2Q13625 1128 aa9.46□□□□□ -0.9
VTA1-205ENST00000620996 GPR18Q14330 331 aa9.46□□□□□ -0.9
VTA1-205ENST00000620996 CYP27C1Q4G0S4 372 aa9.46□□□□□ -0.9
VTA1-205ENST00000620996 TNFAIP8L2Q6P589 184 aaPredicted RBP9.46□□□□□ -0.9
VTA1-205ENST00000620996 TRIM40Q6P9F5 258 aa9.46□□□□□ -0.9
VTA1-205ENST00000620996 TBPL2Q6SJ96 375 aa9.46□□□□□ -0.9
VTA1-205ENST00000620996 UGT2A3Q6UWM9 527 aa9.46□□□□□ -0.9
VTA1-205ENST00000620996 SLC22A18ASQ8N1D0 253 aa9.46□□□□□ -0.9
VTA1-205ENST00000620996 FAM46DQ8NEK8 389 aa9.46□□□□□ -0.9
VTA1-205ENST00000620996 NFKBIDQ8NI38 313 aa9.46□□□□□ -0.9
VTA1-205ENST00000620996 SPPL2AQ8TCT8 520 aa9.46□□□□□ -0.9
VTA1-205ENST00000620996 ASB12Q8WXK4 309 aa9.46□□□□□ -0.9
VTA1-205ENST00000620996 TM4SF18Q96CE8 201 aa9.46□□□□□ -0.9
VTA1-205ENST00000620996 HSH2DQ96JZ2 352 aa9.46□□□□□ -0.9
VTA1-205ENST00000620996 ADI1Q9BV57 179 aa9.46□□□□□ -0.9
VTA1-205ENST00000620996 RUBCNLQ9H714 662 aa9.46□□□□□ -0.9
VTA1-205ENST00000620996 KIR3DX1Q9H7L2 352 aa9.46□□□□□ -0.9
VTA1-205ENST00000620996 CNOT11Q9UKZ1 510 aaKnown RBP9.46□□□□□ -0.9
VTA1-205ENST00000620996 CORO2BQ9UQ03 480 aa9.46□□□□□ -0.9
VTA1-205ENST00000620996 SLCO1B1Q9Y6L6 691 aa9.46□□□□□ -0.9
VTA1-205ENST00000620996 SDK1Q7Z5N4 2213 aa9.45□□□□□ -0.9
VTA1-205ENST00000620996 HS6ST1O60243 411 aa9.45□□□□□ -0.9
VTA1-205ENST00000620996 SEMA3DO95025 777 aa9.45□□□□□ -0.9
VTA1-205ENST00000620996 SNAP29O95721 258 aa9.45□□□□□ -0.9
VTA1-205ENST00000620996 ALBP02768 609 aa9.45□□□□□ -0.9
VTA1-205ENST00000620996 GNAO1P09471 354 aa9.45□□□□□ -0.9
VTA1-205ENST00000620996 FOSL2P15408 326 aa9.45□□□□□ -0.9
VTA1-205ENST00000620996 TYRP1P17643 537 aa9.45□□□□□ -0.9
VTA1-205ENST00000620996 DDCP20711 480 aa9.45□□□□□ -0.9
VTA1-205ENST00000620996 PRKACGP22612 351 aa9.45□□□□□ -0.9
VTA1-205ENST00000620996 KDELR2P33947 212 aa9.45□□□□□ -0.9
VTA1-205ENST00000620996 CD97P48960 835 aa9.45□□□□□ -0.9
VTA1-205ENST00000620996 GZMMP51124 257 aa9.45□□□□□ -0.9
VTA1-205ENST00000620996 SLAMF1Q13291 335 aa9.45□□□□□ -0.9
VTA1-205ENST00000620996 COL19A1Q14993 1142 aa9.45□□□□□ -0.9
VTA1-205ENST00000620996 FXNQ16595 210 aa9.45□□□□□ -0.9
VTA1-205ENST00000620996 MPEG1Q2M385 716 aa9.45□□□□□ -0.9
VTA1-205ENST00000620996 GCNT6Q5T4J0 391 aa9.45□□□□□ -0.9
VTA1-205ENST00000620996 ERICH5Q6P6B1 374 aa9.45□□□□□ -0.9
VTA1-205ENST00000620996 KLHL35Q6PF15 583 aa9.45□□□□□ -0.9
VTA1-205ENST00000620996 UTS2BQ765I0 119 aa9.45□□□□□ -0.9
VTA1-205ENST00000620996 PTOV1Q86YD1 416 aa9.45□□□□□ -0.9
VTA1-205ENST00000620996 ZNF786Q8N393 782 aa9.45□□□□□ -0.9
VTA1-205ENST00000620996 MARVELD2Q8N4S9 558 aa9.45□□□□□ -0.9
VTA1-205ENST00000620996 C11orf65Q8NCR3 313 aa9.45□□□□□ -0.9
VTA1-205ENST00000620996 OTUB1Q96FW1 271 aaPredicted RBP9.45□□□□□ -0.9
VTA1-205ENST00000620996 TEFMQ96QE5 360 aaKnown RBP9.45□□□□□ -0.9
VTA1-205ENST00000620996 BBS4Q96RK4 519 aa9.45□□□□□ -0.9
VTA1-205ENST00000620996 SMURF2Q9HAU4 748 aa9.45□□□□□ -0.9
VTA1-205ENST00000620996 TMEM184CQ9NVA4 438 aa9.45□□□□□ -0.9
VTA1-205ENST00000620996 SMPD3Q9NY59 655 aaPredicted RBP9.45□□□□□ -0.9
VTA1-205ENST00000620996 RPS6KA6Q9UK32 745 aa9.45□□□□□ -0.9
VTA1-205ENST00000620996 LRIT2A6NDA9 550 aa9.45□□□□□ -0.9
VTA1-205ENST00000620996 KLHL18O94889 574 aa9.45□□□□□ -0.9
VTA1-205ENST00000620996 RASAL1O95294 804 aa9.45□□□□□ -0.9
VTA1-205ENST00000620996 RETP07949 1114 aa9.45□□□□□ -0.9
VTA1-205ENST00000620996 C8orf89P0DMQ9 161 aa9.45□□□□□ -0.9
VTA1-205ENST00000620996 PVRP15151 417 aa9.45□□□□□ -0.9
VTA1-205ENST00000620996 HOXB9P17482 250 aaPredicted RBP9.45□□□□□ -0.9
VTA1-205ENST00000620996 GPX2P18283 190 aa9.45□□□□□ -0.9
VTA1-205ENST00000620996 CERS1P27544 350 aa9.45□□□□□ -0.9
VTA1-205ENST00000620996 SERPINB1P30740 379 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms