RNA–Protein interactions for RNA: ENST00000620992.4

PTPDC1-204, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPDC1, Length 4,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-204ENST00000620992 PRKD3O94806 890 aa7.96□□□□□ -1.14
PTPDC1-204ENST00000620992 CCNDBP1O95273 360 aa7.96□□□□□ -1.14
PTPDC1-204ENST00000620992 NR2F6P10588 404 aa7.96□□□□□ -1.14
PTPDC1-204ENST00000620992 BMP1P13497 986 aa7.96□□□□□ -1.14
PTPDC1-204ENST00000620992 ITGA2P17301 1181 aa7.96□□□□□ -1.14
PTPDC1-204ENST00000620992 DDX6P26196 483 aaKnown RBP eCLIP7.96□□□□□ -1.14
PTPDC1-204ENST00000620992 ASMTP46597 345 aa7.96□□□□□ -1.14
PTPDC1-204ENST00000620992 NFATC3Q12968 1075 aa7.96□□□□□ -1.14
PTPDC1-204ENST00000620992 GRIK2Q13002 908 aa7.96□□□□□ -1.14
PTPDC1-204ENST00000620992 CHAF1BQ13112 559 aa7.96□□□□□ -1.14
PTPDC1-204ENST00000620992 RIN1Q13671 783 aa7.96□□□□□ -1.14
PTPDC1-204ENST00000620992 SMAD2Q15796 467 aaKnown RBP7.96□□□□□ -1.14
PTPDC1-204ENST00000620992 GTDC1Q4AE62 458 aa7.96□□□□□ -1.14
PTPDC1-204ENST00000620992 SLC35F1Q5T1Q4 408 aa7.96□□□□□ -1.14
PTPDC1-204ENST00000620992 SLC25A24Q6NUK1 477 aa7.96□□□□□ -1.14
PTPDC1-204ENST00000620992 ZNF773Q6PK81 442 aa7.96□□□□□ -1.14
PTPDC1-204ENST00000620992 KLHL17Q6TDP4 642 aa7.96□□□□□ -1.14
PTPDC1-204ENST00000620992 KRTCAP2Q8N6L1 136 aa7.96□□□□□ -1.14
PTPDC1-204ENST00000620992 ADAMTS19Q8TE59 1207 aa7.96□□□□□ -1.14
PTPDC1-204ENST00000620992 SMPDL3AQ92484 453 aa7.96□□□□□ -1.14
PTPDC1-204ENST00000620992 FAM3CQ92520 227 aa7.96□□□□□ -1.14
PTPDC1-204ENST00000620992 SLC46A2Q9BY10 475 aa7.96□□□□□ -1.14
PTPDC1-204ENST00000620992 SFXN1Q9H9B4 322 aa7.96□□□□□ -1.14
PTPDC1-204ENST00000620992 RNGTTO60942 597 aaKnown RBP7.95□□□□□ -1.14
PTPDC1-204ENST00000620992 NOS1APO75052 506 aaPredicted RBP7.95□□□□□ -1.14
PTPDC1-204ENST00000620992 SEC24AO95486 1093 aa7.95□□□□□ -1.14
PTPDC1-204ENST00000620992 TSPAN12O95859 305 aa7.95□□□□□ -1.14
PTPDC1-204ENST00000620992 PRLP01236 227 aa7.95□□□□□ -1.14
PTPDC1-204ENST00000620992 C8GP07360 202 aa7.95□□□□□ -1.14
PTPDC1-204ENST00000620992 C7P10643 843 aa7.95□□□□□ -1.14
PTPDC1-204ENST00000620992 CEBPBP17676 345 aa7.95□□□□□ -1.14
PTPDC1-204ENST00000620992 CSNK2A2P19784 350 aaPredicted RBP7.95□□□□□ -1.14
PTPDC1-204ENST00000620992 AK4P27144 223 aaPredicted RBP7.95□□□□□ -1.14
PTPDC1-204ENST00000620992 DCKP27707 260 aa7.95□□□□□ -1.14
PTPDC1-204ENST00000620992 SGSHP51688 502 aa7.95□□□□□ -1.14
PTPDC1-204ENST00000620992 GMFBP60983 142 aa7.95□□□□□ -1.14
PTPDC1-204ENST00000620992 TARDBPQ13148 414 aaKnown RBP eCLIP7.95□□□□□ -1.14
PTPDC1-204ENST00000620992 ELAVL3Q14576 367 aaKnown RBP7.95□□□□□ -1.14
PTPDC1-204ENST00000620992 TCEAL5Q5H9L2 206 aa7.95□□□□□ -1.14
PTPDC1-204ENST00000620992 NXPE1Q8N323 547 aa7.95□□□□□ -1.14
PTPDC1-204ENST00000620992 CHST4Q8NCG5 386 aa7.95□□□□□ -1.14
PTPDC1-204ENST00000620992 OR7A2PQ8NGA2 310 aa7.95□□□□□ -1.14
PTPDC1-204ENST00000620992 TBC1D15Q8TC07 691 aa7.95□□□□□ -1.14
PTPDC1-204ENST00000620992 SNX33Q8WV41 574 aa7.95□□□□□ -1.14
PTPDC1-204ENST00000620992 KCNJ9Q92806 393 aa7.95□□□□□ -1.14
PTPDC1-204ENST00000620992 FATE1Q969F0 183 aa7.95□□□□□ -1.14
PTPDC1-204ENST00000620992 SLC35G5Q96KT7 338 aa7.95□□□□□ -1.14
PTPDC1-204ENST00000620992 LHPPQ9H008 270 aa7.95□□□□□ -1.14
PTPDC1-204ENST00000620992 RNF38Q9H0F5 515 aa7.95□□□□□ -1.14
PTPDC1-204ENST00000620992 TBC1D17Q9HA65 648 aa7.95□□□□□ -1.14
PTPDC1-204ENST00000620992 PDFQ9HBH1 243 aa7.95□□□□□ -1.14
PTPDC1-204ENST00000620992 DOCK4Q8N1I0 1966 aa7.95□□□□□ -1.14
PTPDC1-204ENST00000620992 TOR1BO14657 336 aa7.95□□□□□ -1.14
PTPDC1-204ENST00000620992 PLD2O14939 933 aa7.95□□□□□ -1.14
PTPDC1-204ENST00000620992 KDELR3O43731 214 aa7.95□□□□□ -1.14
PTPDC1-204ENST00000620992 STX11O75558 287 aa7.95□□□□□ -1.14
PTPDC1-204ENST00000620992 APOL3O95236 402 aa7.95□□□□□ -1.14
PTPDC1-204ENST00000620992 PRR35P0CG20 571 aa7.95□□□□□ -1.14
PTPDC1-204ENST00000620992 MPIP34949 423 aa7.95□□□□□ -1.14
PTPDC1-204ENST00000620992 ZFP36L2P47974 494 aaKnown RBP7.95□□□□□ -1.14
PTPDC1-204ENST00000620992 BMXP51813 675 aa7.95□□□□□ -1.14
PTPDC1-204ENST00000620992 NUDT6P53370 316 aa7.95□□□□□ -1.14
PTPDC1-204ENST00000620992 RPS26P62854 115 aaKnown RBP7.95□□□□□ -1.14
PTPDC1-204ENST00000620992 GRIN2CQ14957 1233 aa7.95□□□□□ -1.14
PTPDC1-204ENST00000620992 LRRC26Q2I0M4 334 aa7.95□□□□□ -1.14
PTPDC1-204ENST00000620992 ZNF829Q3KNS6 432 aaPredicted RBP7.95□□□□□ -1.14
PTPDC1-204ENST00000620992 ZNF805Q5CZA5 627 aa7.95□□□□□ -1.14
PTPDC1-204ENST00000620992 DLEU7Q6UYE1 221 aa7.95□□□□□ -1.14
PTPDC1-204ENST00000620992 GPAT4Q86UL3 456 aa7.95□□□□□ -1.14
PTPDC1-204ENST00000620992 RTN4RL1Q86UN2 441 aaPredicted RBP7.95□□□□□ -1.14
PTPDC1-204ENST00000620992 OR10H4Q8NGA5 316 aa7.95□□□□□ -1.14
PTPDC1-204ENST00000620992 ZBED6CLQ96FA7 236 aaPredicted RBP7.95□□□□□ -1.14
PTPDC1-204ENST00000620992 COPS4Q9BT78 406 aa7.95□□□□□ -1.14
PTPDC1-204ENST00000620992 DPH7Q9BTV6 452 aa7.95□□□□□ -1.14
PTPDC1-204ENST00000620992 LDAHQ9H6V9 325 aa7.95□□□□□ -1.14
PTPDC1-204ENST00000620992 ZBTB20Q9HC78 741 aaPredicted RBP7.95□□□□□ -1.14
PTPDC1-204ENST00000620992 SLC35C2Q9NQQ7 365 aa7.95□□□□□ -1.14
PTPDC1-204ENST00000620992 PDE10AQ9Y233 779 aa7.95□□□□□ -1.14
PTPDC1-204ENST00000620992 RUVBL1Q9Y265 456 aaKnown RBP7.95□□□□□ -1.14
PTPDC1-204ENST00000620992 MED31Q9Y3C7 131 aa7.95□□□□□ -1.14
PTPDC1-204ENST00000620992 PCDHGA8Q9Y5G5 932 aa7.95□□□□□ -1.14
PTPDC1-204ENST00000620992 EIF1AYO14602 144 aaKnown RBP7.95□□□□□ -1.14
PTPDC1-204ENST00000620992 PDE9AO76083 593 aa7.95□□□□□ -1.14
PTPDC1-204ENST00000620992 BCHEP06276 602 aa7.95□□□□□ -1.14
PTPDC1-204ENST00000620992 JUPP14923 745 aa7.95□□□□□ -1.14
PTPDC1-204ENST00000620992 AGXTP21549 392 aa7.95□□□□□ -1.14
PTPDC1-204ENST00000620992 NTSR1P30989 418 aa7.95□□□□□ -1.14
PTPDC1-204ENST00000620992 SLC6A11P48066 632 aa7.95□□□□□ -1.14
PTPDC1-204ENST00000620992 ADARB1P78563 741 aaKnown RBP7.95□□□□□ -1.14
PTPDC1-204ENST00000620992 KCNAB2Q13303 367 aa7.95□□□□□ -1.14
PTPDC1-204ENST00000620992 DEFB133Q30KQ1 61 aa7.95□□□□□ -1.14
PTPDC1-204ENST00000620992 DCST1Q5T197 706 aa7.95□□□□□ -1.14
PTPDC1-204ENST00000620992 KIAA1161Q6NSJ0 714 aa7.95□□□□□ -1.14
PTPDC1-204ENST00000620992 OXR1Q8N573 874 aa7.95□□□□□ -1.14
PTPDC1-204ENST00000620992 PSMA8Q8TAA3 256 aa7.95□□□□□ -1.14
PTPDC1-204ENST00000620992 SLC38A4Q969I6 547 aa7.95□□□□□ -1.14
PTPDC1-204ENST00000620992 IFT27Q9BW83 186 aa7.95□□□□□ -1.14
PTPDC1-204ENST00000620992 NTN4Q9HB63 628 aa7.95□□□□□ -1.14
PTPDC1-204ENST00000620992 MTRRQ9UBK8 725 aa7.95□□□□□ -1.14
PTPDC1-204ENST00000620992 MALT1Q9UDY8 824 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms