RNA–Protein interactions for RNA: ENST00000620864.1

COLCA1-205, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best) BASIC

Gene COLCA1, Length 8,098 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-205ENST00000620864 CD3GP09693 182 aa6.93□□□□□ -1.3
COLCA1-205ENST00000620864 GOT1P17174 413 aa6.93□□□□□ -1.3
COLCA1-205ENST00000620864 HOXD12P35452 270 aa6.93□□□□□ -1.3
COLCA1-205ENST00000620864 ASPAP45381 313 aa6.93□□□□□ -1.3
COLCA1-205ENST00000620864 TAGLNQ01995 201 aaKnown RBP6.93□□□□□ -1.3
COLCA1-205ENST00000620864 C2orf76Q3KRA6 126 aa6.93□□□□□ -1.3
COLCA1-205ENST00000620864 COQ5Q5HYK3 327 aa6.93□□□□□ -1.3
COLCA1-205ENST00000620864 RTL6Q6ICC9 239 aa6.93□□□□□ -1.3
COLCA1-205ENST00000620864 ANKRD54Q6NXT1 300 aa6.93□□□□□ -1.3
COLCA1-205ENST00000620864 NPNTQ6UXI9 565 aa6.93□□□□□ -1.3
COLCA1-205ENST00000620864 ABHD13Q7L211 337 aa6.93□□□□□ -1.3
COLCA1-205ENST00000620864 OTOP1Q7RTM1 612 aa6.93□□□□□ -1.3
COLCA1-205ENST00000620864 CMC1Q7Z7K0 106 aa6.93□□□□□ -1.3
COLCA1-205ENST00000620864 GPR149Q86SP6 731 aa6.93□□□□□ -1.3
COLCA1-205ENST00000620864 ZNF598Q86UK7 904 aaKnown RBP6.93□□□□□ -1.3
COLCA1-205ENST00000620864 NUDT13Q86X67 352 aa6.93□□□□□ -1.3
COLCA1-205ENST00000620864 NXPE1Q8N323 547 aa6.93□□□□□ -1.3
COLCA1-205ENST00000620864 HERVK_113Q902F9 699 aa6.93□□□□□ -1.3
COLCA1-205ENST00000620864 CGREF1Q99674 301 aa6.93□□□□□ -1.3
COLCA1-205ENST00000620864 WDR18Q9BV38 432 aa6.93□□□□□ -1.3
COLCA1-205ENST00000620864 TM6SF2Q9BZW4 377 aa6.93□□□□□ -1.3
COLCA1-205ENST00000620864 MAGIXQ9H6Y5 334 aa6.93□□□□□ -1.3
COLCA1-205ENST00000620864 ZNF226Q9NYT6 803 aa6.93□□□□□ -1.3
COLCA1-205ENST00000620864 LAMP5Q9UJQ1 280 aa6.93□□□□□ -1.3
COLCA1-205ENST00000620864 ICKQ9UPZ9 632 aa6.93□□□□□ -1.3
COLCA1-205ENST00000620864 WTIPA6NIX2 430 aaPredicted RBP6.93□□□□□ -1.3
COLCA1-205ENST00000620864 HLA-EP13747 358 aa6.93□□□□□ -1.3
COLCA1-205ENST00000620864 CXCR1P25024 350 aa6.93□□□□□ -1.3
COLCA1-205ENST00000620864 G0S2P27469 103 aa6.93□□□□□ -1.3
COLCA1-205ENST00000620864 SRP14P37108 136 aaKnown RBP6.93□□□□□ -1.3
COLCA1-205ENST00000620864 PSMD8P48556 350 aa6.93□□□□□ -1.3
COLCA1-205ENST00000620864 NDST2P52849 883 aa6.93□□□□□ -1.3
COLCA1-205ENST00000620864 HNRNPA0Q13151 305 aaKnown RBP6.93□□□□□ -1.3
COLCA1-205ENST00000620864 TLDC1Q6P9B6 456 aa6.93□□□□□ -1.3
COLCA1-205ENST00000620864 SSX9Q7RTT3 188 aa6.93□□□□□ -1.3
COLCA1-205ENST00000620864 VTCN1Q7Z7D3 282 aa6.93□□□□□ -1.3
COLCA1-205ENST00000620864 SLC9B2Q86UD5 537 aa6.93□□□□□ -1.3
COLCA1-205ENST00000620864 FAM129CQ86XR2 697 aa6.93□□□□□ -1.3
COLCA1-205ENST00000620864 DDX51Q8N8A6 666 aaKnown RBP eCLIP6.93□□□□□ -1.3
COLCA1-205ENST00000620864 OR7G1Q8NGA0 311 aa6.93□□□□□ -1.3
COLCA1-205ENST00000620864 EXOSC8Q96B26 276 aaKnown RBP6.93□□□□□ -1.3
COLCA1-205ENST00000620864 RNF121Q9H920 327 aa6.93□□□□□ -1.3
COLCA1-205ENST00000620864 DEC1Q9P2X7 70 aa6.93□□□□□ -1.3
COLCA1-205ENST00000620864 KIF13AQ9H1H9 1805 aa6.93□□□□□ -1.3
COLCA1-205ENST00000620864 SLC35F4A4IF30 521 aa6.93□□□□□ -1.3
COLCA1-205ENST00000620864 J3QW42 95 aa6.93□□□□□ -1.3
COLCA1-205ENST00000620864 PIP5K1BO14986 540 aa6.93□□□□□ -1.3
COLCA1-205ENST00000620864 AHSA1O95433 338 aa6.93□□□□□ -1.3
COLCA1-205ENST00000620864 SFTPBP07988 381 aa6.93□□□□□ -1.3
COLCA1-205ENST00000620864 NDUFS1P28331 727 aa6.93□□□□□ -1.3
COLCA1-205ENST00000620864 GABRR2P28476 465 aa6.93□□□□□ -1.3
COLCA1-205ENST00000620864 ICAM3P32942 547 aa6.93□□□□□ -1.3
COLCA1-205ENST00000620864 CD97P48960 835 aa6.93□□□□□ -1.3
COLCA1-205ENST00000620864 HCAR3P49019 387 aa6.93□□□□□ -1.3
COLCA1-205ENST00000620864 MC2RQ01718 297 aa6.93□□□□□ -1.3
COLCA1-205ENST00000620864 OGDHQ02218 1023 aa6.93□□□□□ -1.3
COLCA1-205ENST00000620864 GBE1Q04446 702 aa6.93□□□□□ -1.3
COLCA1-205ENST00000620864 MON1AQ86VX9 555 aa6.93□□□□□ -1.3
COLCA1-205ENST00000620864 MED30Q96HR3 178 aa6.93□□□□□ -1.3
COLCA1-205ENST00000620864 C7orf34Q96L11 122 aa6.93□□□□□ -1.3
COLCA1-205ENST00000620864 PSD2Q9BQI7 771 aa6.93□□□□□ -1.3
COLCA1-205ENST00000620864 RTP3Q9BQQ7 232 aa6.93□□□□□ -1.3
COLCA1-205ENST00000620864 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.93□□□□□ -1.3
COLCA1-205ENST00000620864 OXSMQ9NWU1 459 aa6.93□□□□□ -1.3
COLCA1-205ENST00000620864 SLC27A5Q9Y2P5 690 aa6.93□□□□□ -1.3
COLCA1-205ENST00000620864 ST14Q9Y5Y6 855 aa6.93□□□□□ -1.3
COLCA1-205ENST00000620864 NPIPA5E9PKD4 350 aa6.93□□□□□ -1.3
COLCA1-205ENST00000620864 J3QRK9 145 aa6.93□□□□□ -1.3
COLCA1-205ENST00000620864 CAPN5O15484 640 aaPredicted RBP6.93□□□□□ -1.3
COLCA1-205ENST00000620864 CLEC3AO75596 197 aa6.93□□□□□ -1.3
COLCA1-205ENST00000620864 CD34P28906 385 aa6.93□□□□□ -1.3
COLCA1-205ENST00000620864 MSX2P35548 267 aaPredicted RBP6.93□□□□□ -1.3
COLCA1-205ENST00000620864 PBX3P40426 434 aa6.93□□□□□ -1.3
COLCA1-205ENST00000620864 GRIK5Q16478 980 aa6.93□□□□□ -1.3
COLCA1-205ENST00000620864 CYP1B1Q16678 543 aa6.93□□□□□ -1.3
COLCA1-205ENST00000620864 KIAA1161Q6NSJ0 714 aa6.93□□□□□ -1.3
COLCA1-205ENST00000620864 PRSS58Q8IYP2 241 aa6.93□□□□□ -1.3
COLCA1-205ENST00000620864 FAM160A2Q8N612 972 aaPredicted RBP6.93□□□□□ -1.3
COLCA1-205ENST00000620864 IL22RA1Q8N6P7 574 aa6.93□□□□□ -1.3
COLCA1-205ENST00000620864 LRRC57Q8N9N7 239 aa6.93□□□□□ -1.3
COLCA1-205ENST00000620864 GALNT11Q8NCW6 608 aa6.93□□□□□ -1.3
COLCA1-205ENST00000620864 TSTD1Q8NFU3 115 aa6.93□□□□□ -1.3
COLCA1-205ENST00000620864 FBXL8Q96CD0 374 aa6.93□□□□□ -1.3
COLCA1-205ENST00000620864 SENP8Q96LD8 212 aa6.93□□□□□ -1.3
COLCA1-205ENST00000620864 AGO3Q9H9G7 860 aaKnown RBP6.93□□□□□ -1.3
COLCA1-205ENST00000620864 GABRQQ9UN88 632 aa6.93□□□□□ -1.3
COLCA1-205ENST00000620864 NPIPA1Q9UND3 350 aa6.93□□□□□ -1.3
COLCA1-205ENST00000620864 FBXO7Q9Y3I1 522 aa6.93□□□□□ -1.3
COLCA1-205ENST00000620864 MROH2AA6NES4 1674 aa6.93□□□□□ -1.3
COLCA1-205ENST00000620864 A0A1W2PP18 115 aa6.93□□□□□ -1.3
COLCA1-205ENST00000620864 HYKKA2RU49 373 aa6.93□□□□□ -1.3
COLCA1-205ENST00000620864 LRRC72A6NJI9 287 aa6.93□□□□□ -1.3
COLCA1-205ENST00000620864 ARVCFO00192 962 aa6.93□□□□□ -1.3
COLCA1-205ENST00000620864 WDPCPO95876 746 aa6.93□□□□□ -1.3
COLCA1-205ENST00000620864 GNRHRP30968 328 aa6.93□□□□□ -1.3
COLCA1-205ENST00000620864 NUDT1P36639 197 aa6.93□□□□□ -1.3
COLCA1-205ENST00000620864 SEMA5AQ13591 1074 aa6.93□□□□□ -1.3
COLCA1-205ENST00000620864 LNX1Q8TBB1 728 aaPredicted RBP6.93□□□□□ -1.3
COLCA1-205ENST00000620864 CHAC2Q8WUX2 184 aa6.93□□□□□ -1.3
COLCA1-205ENST00000620864 OVCA2Q8WZ82 227 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms