RNA–Protein interactions for RNA: ENST00000620786.4

CLIP1-219, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CLIP1, Length 5,913 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-219ENST00000620786 FIGLAQ6QHK4 219 aa10.94□□□□□ -0.66
CLIP1-219ENST00000620786 MARCH9Q86YJ5 346 aa10.94□□□□□ -0.66
CLIP1-219ENST00000620786 TREML1Q86YW5 311 aa10.94□□□□□ -0.66
CLIP1-219ENST00000620786 TMEM151BQ8IW70 566 aa10.94□□□□□ -0.66
CLIP1-219ENST00000620786 ZNF565Q8N9K5 539 aa10.94□□□□□ -0.66
CLIP1-219ENST00000620786 KAT8Q9H7Z6 458 aaKnown RBP10.94□□□□□ -0.66
CLIP1-219ENST00000620786 CYTH4Q9UIA0 394 aa10.94□□□□□ -0.66
CLIP1-219ENST00000620786 FABP12A6NFH5 140 aa10.94□□□□□ -0.66
CLIP1-219ENST00000620786 EMC8O43402 210 aa10.94□□□□□ -0.66
CLIP1-219ENST00000620786 CREG1O75629 220 aa10.94□□□□□ -0.66
CLIP1-219ENST00000620786 ZNF16P17020 682 aaPredicted RBP10.94□□□□□ -0.66
CLIP1-219ENST00000620786 PRKCDQ05655 676 aa10.94□□□□□ -0.66
CLIP1-219ENST00000620786 ECH1Q13011 328 aa10.94□□□□□ -0.66
CLIP1-219ENST00000620786 COL9A2Q14055 689 aaPredicted RBP10.94□□□□□ -0.66
CLIP1-219ENST00000620786 TRAM2Q15035 370 aa10.94□□□□□ -0.66
CLIP1-219ENST00000620786 LIN52Q52LA3 116 aa10.94□□□□□ -0.66
CLIP1-219ENST00000620786 ZNF227Q86WZ6 799 aa10.94□□□□□ -0.66
CLIP1-219ENST00000620786 TCEAL8Q8IYN2 117 aa10.94□□□□□ -0.66
CLIP1-219ENST00000620786 ADAMTS18Q8TE60 1221 aa10.94□□□□□ -0.66
CLIP1-219ENST00000620786 MAPKAP1Q9BPZ7 522 aa10.94□□□□□ -0.66
CLIP1-219ENST00000620786 MCOLN1Q9GZU1 580 aa10.94□□□□□ -0.66
CLIP1-219ENST00000620786 DENND2DQ9H6A0 471 aaPredicted RBP10.94□□□□□ -0.66
CLIP1-219ENST00000620786 GPR89AB7ZAQ6 455 aa10.94□□□□□ -0.66
CLIP1-219ENST00000620786 M0QZQ0 153 aa10.94□□□□□ -0.66
CLIP1-219ENST00000620786 PROS1P07225 676 aa10.94□□□□□ -0.66
CLIP1-219ENST00000620786 GPR89BP0CG08 455 aa10.94□□□□□ -0.66
CLIP1-219ENST00000620786 FOLR3P41439 243 aa10.94□□□□□ -0.66
CLIP1-219ENST00000620786 C10orf62Q5T681 223 aaPredicted RBP10.94□□□□□ -0.66
CLIP1-219ENST00000620786 PSAPL1Q6NUJ1 521 aa10.94□□□□□ -0.66
CLIP1-219ENST00000620786 NXPE4Q6UWF7 544 aa10.94□□□□□ -0.66
CLIP1-219ENST00000620786 GALNT12Q8IXK2 581 aa10.94□□□□□ -0.66
CLIP1-219ENST00000620786 DOK4Q8TEW6 326 aa10.94□□□□□ -0.66
CLIP1-219ENST00000620786 F2RL3Q96RI0 385 aa10.94□□□□□ -0.66
CLIP1-219ENST00000620786 RANBP9Q96S59 729 aa10.94□□□□□ -0.66
CLIP1-219ENST00000620786 MEAF6Q9HAF1 191 aa10.94□□□□□ -0.66
CLIP1-219ENST00000620786 C5orf51A6NDU8 294 aa10.94□□□□□ -0.66
CLIP1-219ENST00000620786 PRAMEF26H0Y7S4 382 aa10.94□□□□□ -0.66
CLIP1-219ENST00000620786 ENDOUP21128 410 aaKnown RBP10.94□□□□□ -0.66
CLIP1-219ENST00000620786 AQP4P55087 323 aa10.94□□□□□ -0.66
CLIP1-219ENST00000620786 MLLT1Q03111 559 aaPredicted RBP10.94□□□□□ -0.66
CLIP1-219ENST00000620786 NFE2L1Q14494 772 aa10.94□□□□□ -0.66
CLIP1-219ENST00000620786 NPTX1Q15818 432 aa10.94□□□□□ -0.66
CLIP1-219ENST00000620786 LACTB2Q53H82 288 aaPredicted RBP10.94□□□□□ -0.66
CLIP1-219ENST00000620786 ZNF782Q6ZMW2 699 aaPredicted RBP10.94□□□□□ -0.66
CLIP1-219ENST00000620786 SLC39A11Q8N1S5 342 aa10.94□□□□□ -0.66
CLIP1-219ENST00000620786 DGCR14Q96DF8 476 aaKnown RBP10.94□□□□□ -0.66
CLIP1-219ENST00000620786 ASB9Q96DX5 294 aa10.94□□□□□ -0.66
CLIP1-219ENST00000620786 OR51I1Q9H343 314 aa10.94□□□□□ -0.66
CLIP1-219ENST00000620786 RPF2Q9H7B2 306 aaKnown RBP10.94□□□□□ -0.66
CLIP1-219ENST00000620786 AMBNQ9NP70 447 aa10.94□□□□□ -0.66
CLIP1-219ENST00000620786 ENY2Q9NPA8 101 aa10.94□□□□□ -0.66
CLIP1-219ENST00000620786 CHD2O14647 1828 aaKnown RBP10.94□□□□□ -0.66
CLIP1-219ENST00000620786 HSPA12AO43301 675 aa10.93□□□□□ -0.66
CLIP1-219ENST00000620786 LILRB3O75022 631 aa10.93□□□□□ -0.66
CLIP1-219ENST00000620786 DIRAS1O95057 198 aa10.93□□□□□ -0.66
CLIP1-219ENST00000620786 RAB36O95755 333 aa10.93□□□□□ -0.66
CLIP1-219ENST00000620786 ITGB1P05556 798 aa10.93□□□□□ -0.66
CLIP1-219ENST00000620786 CD1DP15813 335 aa10.93□□□□□ -0.66
CLIP1-219ENST00000620786 NSDHLQ15738 373 aa10.93□□□□□ -0.66
CLIP1-219ENST00000620786 OGFOD2Q6N063 350 aa10.93□□□□□ -0.66
CLIP1-219ENST00000620786 EPGNQ6UW88 154 aa10.93□□□□□ -0.66
CLIP1-219ENST00000620786 Q6ZSR6 202 aa10.93□□□□□ -0.66
CLIP1-219ENST00000620786 ZNF615Q8N8J6 731 aa10.93□□□□□ -0.66
CLIP1-219ENST00000620786 OR6N2Q8NGY6 317 aa10.93□□□□□ -0.66
CLIP1-219ENST00000620786 DIO2Q92813 273 aa10.93□□□□□ -0.66
CLIP1-219ENST00000620786 OSTF1Q92882 214 aa10.93□□□□□ -0.66
CLIP1-219ENST00000620786 TMEM74Q96NL1 305 aa10.93□□□□□ -0.66
CLIP1-219ENST00000620786 TTYH1Q9H313 450 aaPredicted RBP10.93□□□□□ -0.66
CLIP1-219ENST00000620786 C4BP0C0L5 1744 aa10.93□□□□□ -0.66
CLIP1-219ENST00000620786 NUP188Q5SRE5 1749 aa10.93□□□□□ -0.66
CLIP1-219ENST00000620786 A6NL46 340 aa10.93□□□□□ -0.66
CLIP1-219ENST00000620786 RLN2P04090 185 aa10.93□□□□□ -0.66
CLIP1-219ENST00000620786 RORAP35398 523 aa10.93□□□□□ -0.66
CLIP1-219ENST00000620786 SPINT3P49223 89 aa10.93□□□□□ -0.66
CLIP1-219ENST00000620786 MLLT10P55197 1068 aa10.93□□□□□ -0.66
CLIP1-219ENST00000620786 DNAJB13P59910 316 aa10.93□□□□□ -0.66
CLIP1-219ENST00000620786 GALK2Q01415 458 aa10.93□□□□□ -0.66
CLIP1-219ENST00000620786 DEFB110Q30KQ9 67 aa10.93□□□□□ -0.66
CLIP1-219ENST00000620786 TSPAN33Q86UF1 283 aa10.93□□□□□ -0.66
CLIP1-219ENST00000620786 OR56A3Q8NH54 315 aa10.93□□□□□ -0.66
CLIP1-219ENST00000620786 ACOT12Q8WYK0 555 aa10.93□□□□□ -0.66
CLIP1-219ENST00000620786 RADILQ96JH8 1075 aa10.93□□□□□ -0.66
CLIP1-219ENST00000620786 KCTD7Q96MP8 289 aa10.93□□□□□ -0.66
CLIP1-219ENST00000620786 ANKRA2Q9H9E1 313 aa10.93□□□□□ -0.66
CLIP1-219ENST00000620786 ZBTB20Q9HC78 741 aaPredicted RBP10.93□□□□□ -0.66
CLIP1-219ENST00000620786 HHATLQ9HCP6 504 aa10.93□□□□□ -0.66
CLIP1-219ENST00000620786 PCDHB16Q9NRJ7 776 aa10.93□□□□□ -0.66
CLIP1-219ENST00000620786 SAGE1Q9NXZ1 904 aa10.93□□□□□ -0.66
CLIP1-219ENST00000620786 MYH2Q9UKX2 1941 aa10.93□□□□□ -0.66
CLIP1-219ENST00000620786 TEX13CA0A0J9YWL9 993 aa10.93□□□□□ -0.66
CLIP1-219ENST00000620786 H3BUI4 141 aa10.93□□□□□ -0.66
CLIP1-219ENST00000620786 PGCP20142 388 aa10.93□□□□□ -0.66
CLIP1-219ENST00000620786 TCTE1Q5JU00 501 aa10.93□□□□□ -0.66
CLIP1-219ENST00000620786 SLC35F1Q5T1Q4 408 aa10.93□□□□□ -0.66
CLIP1-219ENST00000620786 FCRL3Q96P31 734 aaPredicted RBP10.93□□□□□ -0.66
CLIP1-219ENST00000620786 ZNF382Q96SR6 550 aa10.93□□□□□ -0.66
CLIP1-219ENST00000620786 TTTY10Q9BZA0 68 aa10.93□□□□□ -0.66
CLIP1-219ENST00000620786 HSD3B7Q9H2F3 369 aa10.93□□□□□ -0.66
CLIP1-219ENST00000620786 VNN3Q9NY84 501 aa10.93□□□□□ -0.66
CLIP1-219ENST00000620786 GIMAP2Q9UG22 337 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms