RNA–Protein interactions for RNA: ENST00000618999.4

SRGAP3-213, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 5 BASIC

Gene SRGAP3, Length 3,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-213ENST00000618999 CPPED1Q9BRF8 314 aaPredicted RBP6.71□□□□□ -1.34
SRGAP3-213ENST00000618999 TRMT61BQ9BVS5 477 aaKnown RBP6.71□□□□□ -1.34
SRGAP3-213ENST00000618999 HOXD1Q9GZZ0 328 aa6.71□□□□□ -1.34
SRGAP3-213ENST00000618999 RERGLQ9H628 205 aa6.71□□□□□ -1.34
SRGAP3-213ENST00000618999 TAS2R9Q9NYW1 312 aa6.71□□□□□ -1.34
SRGAP3-213ENST00000618999 CCDC59Q9P031 241 aaKnown RBP6.71□□□□□ -1.34
SRGAP3-213ENST00000618999 SH3BP4Q9P0V3 963 aa6.71□□□□□ -1.34
SRGAP3-213ENST00000618999 TMEFF2Q9UIK5 374 aaPredicted RBP6.71□□□□□ -1.34
SRGAP3-213ENST00000618999 OSGIN1Q9UJX0 560 aa6.71□□□□□ -1.34
SRGAP3-213ENST00000618999 OTOL1A6NHN0 477 aaPredicted RBP6.7□□□□□ -1.34
SRGAP3-213ENST00000618999 H3BQ06 376 aaPredicted RBP6.7□□□□□ -1.34
SRGAP3-213ENST00000618999 OR7A17O14581 309 aa6.7□□□□□ -1.34
SRGAP3-213ENST00000618999 TMCC2O75069 709 aa6.7□□□□□ -1.34
SRGAP3-213ENST00000618999 LEFTY1O75610 366 aa6.7□□□□□ -1.34
SRGAP3-213ENST00000618999 PRPS1L1P21108 318 aa6.7□□□□□ -1.34
SRGAP3-213ENST00000618999 C21orf33P30042 268 aaPredicted RBP6.7□□□□□ -1.34
SRGAP3-213ENST00000618999 WASP42768 502 aa6.7□□□□□ -1.34
SRGAP3-213ENST00000618999 CRATP43155 626 aa6.7□□□□□ -1.34
SRGAP3-213ENST00000618999 BNC1Q01954 994 aa6.7□□□□□ -1.34
SRGAP3-213ENST00000618999 MLLT1Q03111 559 aaPredicted RBP6.7□□□□□ -1.34
SRGAP3-213ENST00000618999 SRSF11Q05519 484 aaKnown RBP6.7□□□□□ -1.34
SRGAP3-213ENST00000618999 TAB1Q15750 504 aa6.7□□□□□ -1.34
SRGAP3-213ENST00000618999 DUOXA1Q1HG43 343 aa6.7□□□□□ -1.34
SRGAP3-213ENST00000618999 ERAP2Q6P179 960 aa6.7□□□□□ -1.34
SRGAP3-213ENST00000618999 NEK5Q6P3R8 708 aa6.7□□□□□ -1.34
SRGAP3-213ENST00000618999 VITQ6UXI7 678 aa6.7□□□□□ -1.34
SRGAP3-213ENST00000618999 PTCHD4Q6ZW05 846 aa6.7□□□□□ -1.34
SRGAP3-213ENST00000618999 TSPAN33Q86UF1 283 aa6.7□□□□□ -1.34
SRGAP3-213ENST00000618999 ZSWIM9Q86XI8 627 aa6.7□□□□□ -1.34
SRGAP3-213ENST00000618999 SLC44A2Q8IWA5 706 aaPredicted RBP6.7□□□□□ -1.34
SRGAP3-213ENST00000618999 SUSD6Q92537 303 aa6.7□□□□□ -1.34
SRGAP3-213ENST00000618999 RHBDF1Q96CC6 855 aa6.7□□□□□ -1.34
SRGAP3-213ENST00000618999 TMEM246Q9BRR3 403 aa6.7□□□□□ -1.34
SRGAP3-213ENST00000618999 INPP5KQ9BT40 448 aa6.7□□□□□ -1.34
SRGAP3-213ENST00000618999 CCDC32Q9BV29 185 aa6.7□□□□□ -1.34
SRGAP3-213ENST00000618999 EBPLQ9BY08 206 aa6.7□□□□□ -1.34
SRGAP3-213ENST00000618999 SLC25A37Q9NYZ2 338 aa6.7□□□□□ -1.34
SRGAP3-213ENST00000618999 GRIP1Q9Y3R0 1128 aa6.7□□□□□ -1.34
SRGAP3-213ENST00000618999 OARD1Q9Y530 152 aa6.7□□□□□ -1.34
SRGAP3-213ENST00000618999 A3GALT2U3KPV4 340 aa6.7□□□□□ -1.34
SRGAP3-213ENST00000618999 GNG14A0A1W2PPG7 69 aa6.7□□□□□ -1.34
SRGAP3-213ENST00000618999 SYNDIG1LA6NDD5 238 aa6.7□□□□□ -1.34
SRGAP3-213ENST00000618999 CLCA1A8K7I4 914 aa6.7□□□□□ -1.34
SRGAP3-213ENST00000618999 A8MV72 311 aaPredicted RBP6.7□□□□□ -1.34
SRGAP3-213ENST00000618999 ZNF821O75541 412 aaPredicted RBP6.7□□□□□ -1.34
SRGAP3-213ENST00000618999 PDE9AO76083 593 aa6.7□□□□□ -1.34
SRGAP3-213ENST00000618999 YES1P07947 543 aa6.7□□□□□ -1.34
SRGAP3-213ENST00000618999 STSP08842 583 aa6.7□□□□□ -1.34
SRGAP3-213ENST00000618999 LAMP2P13473 410 aa6.7□□□□□ -1.34
SRGAP3-213ENST00000618999 CD72P21854 359 aa6.7□□□□□ -1.34
SRGAP3-213ENST00000618999 PSMA1P25786 263 aaKnown RBP6.7□□□□□ -1.34
SRGAP3-213ENST00000618999 HMGCLP35914 325 aa6.7□□□□□ -1.34
SRGAP3-213ENST00000618999 LIPAP38571 399 aa6.7□□□□□ -1.34
SRGAP3-213ENST00000618999 ZFP36L2P47974 494 aaKnown RBP6.7□□□□□ -1.34
SRGAP3-213ENST00000618999 CSNK1DP48730 415 aa6.7□□□□□ -1.34
SRGAP3-213ENST00000618999 RPIAP49247 311 aa6.7□□□□□ -1.34
SRGAP3-213ENST00000618999 CDH12P55289 794 aa6.7□□□□□ -1.34
SRGAP3-213ENST00000618999 IRF8Q02556 426 aa6.7□□□□□ -1.34
SRGAP3-213ENST00000618999 ST3GAL4Q11206 333 aa6.7□□□□□ -1.34
SRGAP3-213ENST00000618999 ADAM15Q13444 863 aa6.7□□□□□ -1.34
SRGAP3-213ENST00000618999 KCNC3Q14003 757 aa6.7□□□□□ -1.34
SRGAP3-213ENST00000618999 QPRTQ15274 297 aa6.7□□□□□ -1.34
SRGAP3-213ENST00000618999 TSTQ16762 297 aaKnown RBP6.7□□□□□ -1.34
SRGAP3-213ENST00000618999 CTSL3PQ5NE16 218 aa6.7□□□□□ -1.34
SRGAP3-213ENST00000618999 ZNF362Q5T0B9 420 aaPredicted RBP6.7□□□□□ -1.34
SRGAP3-213ENST00000618999 KDM4DQ6B0I6 523 aa6.7□□□□□ -1.34
SRGAP3-213ENST00000618999 PARM1Q6UWI2 310 aa6.7□□□□□ -1.34
SRGAP3-213ENST00000618999 FAM131AQ6UXB0 335 aa6.7□□□□□ -1.34
SRGAP3-213ENST00000618999 FAM160A2Q8N612 972 aaPredicted RBP6.7□□□□□ -1.34
SRGAP3-213ENST00000618999 C11orf65Q8NCR3 313 aa6.7□□□□□ -1.34
SRGAP3-213ENST00000618999 OR2A12Q8NGT7 310 aa6.7□□□□□ -1.34
SRGAP3-213ENST00000618999 RHNO1Q9BSD3 238 aa6.7□□□□□ -1.34
SRGAP3-213ENST00000618999 CNPPD1Q9BV87 410 aa6.7□□□□□ -1.34
SRGAP3-213ENST00000618999 ACTL8Q9H568 366 aa6.7□□□□□ -1.34
SRGAP3-213ENST00000618999 ERVK13-1Q9NX77 482 aa6.7□□□□□ -1.34
SRGAP3-213ENST00000618999 TMCC3Q9ULS5 477 aa6.7□□□□□ -1.34
SRGAP3-213ENST00000618999 CARD8Q9Y2G2 431 aa6.7□□□□□ -1.34
SRGAP3-213ENST00000618999 POFUT2Q9Y2G5 429 aa6.7□□□□□ -1.34
SRGAP3-213ENST00000618999 NOX1Q9Y5S8 564 aa6.7□□□□□ -1.34
SRGAP3-213ENST00000618999 NOTCH4Q99466 2003 aa6.7□□□□□ -1.34
SRGAP3-213ENST00000618999 ZFC3H1O60293 1989 aaKnown RBP6.7□□□□□ -1.34
SRGAP3-213ENST00000618999 ANKRD34BA5PLL1 514 aa6.7□□□□□ -1.34
SRGAP3-213ENST00000618999 PRRT4C9JH25 899 aa6.7□□□□□ -1.34
SRGAP3-213ENST00000618999 GPR39O43194 453 aa6.7□□□□□ -1.34
SRGAP3-213ENST00000618999 HOXC11O43248 304 aaPredicted RBP6.7□□□□□ -1.34
SRGAP3-213ENST00000618999 KIAA0513O60268 411 aa6.7□□□□□ -1.34
SRGAP3-213ENST00000618999 IL1RNP18510 177 aa6.7□□□□□ -1.34
SRGAP3-213ENST00000618999 PTX3P26022 381 aaPredicted RBP6.7□□□□□ -1.34
SRGAP3-213ENST00000618999 UGT2B15P54855 530 aa6.7□□□□□ -1.34
SRGAP3-213ENST00000618999 TIAL1Q01085 375 aaKnown RBP eCLIP6.7□□□□□ -1.34
SRGAP3-213ENST00000618999 LRRC74AQ0VAA2 488 aa6.7□□□□□ -1.34
SRGAP3-213ENST00000618999 HSPA14Q0VDF9 509 aa6.7□□□□□ -1.34
SRGAP3-213ENST00000618999 TBRG1Q3YBR2 411 aa6.7□□□□□ -1.34
SRGAP3-213ENST00000618999 LYPLAL1Q5VWZ2 237 aa6.7□□□□□ -1.34
SRGAP3-213ENST00000618999 TCAIMQ8N3R3 496 aa6.7□□□□□ -1.34
SRGAP3-213ENST00000618999 C19orf18Q8NEA5 215 aa6.7□□□□□ -1.34
SRGAP3-213ENST00000618999 FGF14Q92915 247 aa6.7□□□□□ -1.34
SRGAP3-213ENST00000618999 NXPE3Q969Y0 559 aa6.7□□□□□ -1.34
SRGAP3-213ENST00000618999 LMLNQ96KR4 655 aa6.7□□□□□ -1.34
SRGAP3-213ENST00000618999 TRNT1Q96Q11 434 aaKnown RBP6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 82.2 ms