RNA–Protein interactions for RNA: ENST00000617647.4

PDE6A-205, Transcript of phosphodiesterase 6A, humanhuman

TSL 1 (best) BASIC

Gene PDE6A, Length 4,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6A-205ENST00000617647 NEDD8-MDP1E9PL57 170 aa7.11□□□□□ -1.27
PDE6A-205ENST00000617647 M0QYT0 321 aa7.11□□□□□ -1.27
PDE6A-205ENST00000617647 M0R036 132 aa7.11□□□□□ -1.27
PDE6A-205ENST00000617647 FXYD1O00168 92 aa7.11□□□□□ -1.27
PDE6A-205ENST00000617647 USP2O75604 605 aaPredicted RBP7.11□□□□□ -1.27
PDE6A-205ENST00000617647 OR4F21O95013 312 aa7.11□□□□□ -1.27
PDE6A-205ENST00000617647 CFDP00746 253 aaPredicted RBP7.11□□□□□ -1.27
PDE6A-205ENST00000617647 MMP12P39900 470 aa7.11□□□□□ -1.27
PDE6A-205ENST00000617647 HSPA7P48741 367 aa7.11□□□□□ -1.27
PDE6A-205ENST00000617647 DAPP51397 102 aa7.11□□□□□ -1.27
PDE6A-205ENST00000617647 SH3BP2P78314 561 aa7.11□□□□□ -1.27
PDE6A-205ENST00000617647 BCL2L1Q07817 233 aa7.11□□□□□ -1.27
PDE6A-205ENST00000617647 GRB14Q14449 540 aa7.11□□□□□ -1.27
PDE6A-205ENST00000617647 FAM74A1Q5RGS3 127 aa7.11□□□□□ -1.27
PDE6A-205ENST00000617647 ZNF678Q5SXM1 525 aa7.11□□□□□ -1.27
PDE6A-205ENST00000617647 SFRP4Q6FHJ7 346 aaPredicted RBP7.11□□□□□ -1.27
PDE6A-205ENST00000617647 PGAP1Q75T13 922 aa7.11□□□□□ -1.27
PDE6A-205ENST00000617647 RHOUQ7L0Q8 258 aa7.11□□□□□ -1.27
PDE6A-205ENST00000617647 FAM122BQ7Z309 247 aa7.11□□□□□ -1.27
PDE6A-205ENST00000617647 ARFGAP1Q8N6T3 406 aa7.11□□□□□ -1.27
PDE6A-205ENST00000617647 SAMD12Q8N8I0 201 aa7.11□□□□□ -1.27
PDE6A-205ENST00000617647 RELL2Q8NC24 303 aaPredicted RBP7.11□□□□□ -1.27
PDE6A-205ENST00000617647 STAG3L4Q8TBR4 150 aa7.11□□□□□ -1.27
PDE6A-205ENST00000617647 STK35Q8TDR2 534 aa7.11□□□□□ -1.27
PDE6A-205ENST00000617647 TSPEARQ8WU66 669 aa7.11□□□□□ -1.27
PDE6A-205ENST00000617647 NSUN5Q96P11 429 aaKnown RBP7.11□□□□□ -1.27
PDE6A-205ENST00000617647 MCCC1Q96RQ3 725 aaPredicted RBP7.11□□□□□ -1.27
PDE6A-205ENST00000617647 THAP7Q9BT49 309 aaPredicted RBP7.11□□□□□ -1.27
PDE6A-205ENST00000617647 H2AFJQ9BTM1 129 aa7.11□□□□□ -1.27
PDE6A-205ENST00000617647 TMUB1Q9BVT8 246 aa7.11□□□□□ -1.27
PDE6A-205ENST00000617647 IFT27Q9BW83 186 aa7.11□□□□□ -1.27
PDE6A-205ENST00000617647 SUCNR1Q9BXA5 334 aa7.11□□□□□ -1.27
PDE6A-205ENST00000617647 CD244Q9BZW8 370 aa7.11□□□□□ -1.27
PDE6A-205ENST00000617647 SHARPINQ9H0F6 387 aa7.11□□□□□ -1.27
PDE6A-205ENST00000617647 TMEM185BQ9H7F4 350 aa7.11□□□□□ -1.27
PDE6A-205ENST00000617647 ZIM2Q9NZV7 527 aa7.11□□□□□ -1.27
PDE6A-205ENST00000617647 PCDHGB7Q9Y5F8 929 aa7.11□□□□□ -1.27
PDE6A-205ENST00000617647 SPATA31A5Q5VU36 1347 aa7.11□□□□□ -1.27
PDE6A-205ENST00000617647 SPATA31A7Q8IWB4 1347 aa7.11□□□□□ -1.27
PDE6A-205ENST00000617647 ANXA2P2A6NMY6 339 aa7.11□□□□□ -1.27
PDE6A-205ENST00000617647 OR2AT4A6NND4 320 aa7.11□□□□□ -1.27
PDE6A-205ENST00000617647 GREM1O60565 184 aa7.11□□□□□ -1.27
PDE6A-205ENST00000617647 MATN4O95460 622 aa7.11□□□□□ -1.27
PDE6A-205ENST00000617647 MLYCDO95822 493 aa7.11□□□□□ -1.27
PDE6A-205ENST00000617647 HIST1H2AGP0C0S8 130 aaPredicted RBP7.11□□□□□ -1.27
PDE6A-205ENST00000617647 G6PDP11413 515 aa7.11□□□□□ -1.27
PDE6A-205ENST00000617647 HIST1H2ADP20671 130 aa7.11□□□□□ -1.27
PDE6A-205ENST00000617647 EFNA1P20827 205 aaPredicted RBP7.11□□□□□ -1.27
PDE6A-205ENST00000617647 FABP9Q0Z7S8 132 aa7.11□□□□□ -1.27
PDE6A-205ENST00000617647 BIKQ13323 160 aa7.11□□□□□ -1.27
PDE6A-205ENST00000617647 SMAD4Q13485 552 aaKnown RBP7.11□□□□□ -1.27
PDE6A-205ENST00000617647 FAM219BQ5XKK7 198 aa7.11□□□□□ -1.27
PDE6A-205ENST00000617647 CD276Q5ZPR3 534 aa7.11□□□□□ -1.27
PDE6A-205ENST00000617647 HIST2H2AA3Q6FI13 130 aa7.11□□□□□ -1.27
PDE6A-205ENST00000617647 DOK6Q6PKX4 331 aa7.11□□□□□ -1.27
PDE6A-205ENST00000617647 GSG1LQ6UXU4 331 aa7.11□□□□□ -1.27
PDE6A-205ENST00000617647 CLEC14AQ86T13 490 aa7.11□□□□□ -1.27
PDE6A-205ENST00000617647 SLC51AQ86UW1 340 aa7.11□□□□□ -1.27
PDE6A-205ENST00000617647 TIAM2Q8IVF5 1701 aa7.11□□□□□ -1.27
PDE6A-205ENST00000617647 LGI4Q8N135 537 aa7.11□□□□□ -1.27
PDE6A-205ENST00000617647 ELP5Q8TE02 316 aa7.11□□□□□ -1.27
PDE6A-205ENST00000617647 ZNF384Q8TF68 577 aa7.11□□□□□ -1.27
PDE6A-205ENST00000617647 ZBED6CLQ96FA7 236 aaPredicted RBP7.11□□□□□ -1.27
PDE6A-205ENST00000617647 HIST1H2AHQ96KK5 128 aa7.11□□□□□ -1.27
PDE6A-205ENST00000617647 HIST1H2AJQ99878 128 aa7.11□□□□□ -1.27
PDE6A-205ENST00000617647 TMEM43Q9BTV4 400 aa7.11□□□□□ -1.27
PDE6A-205ENST00000617647 DPH7Q9BTV6 452 aa7.11□□□□□ -1.27
PDE6A-205ENST00000617647 TRIM62Q9BVG3 475 aa7.11□□□□□ -1.27
PDE6A-205ENST00000617647 OR10A4Q9H209 315 aa7.11□□□□□ -1.27
PDE6A-205ENST00000617647 GAREM1Q9H706 876 aa7.11□□□□□ -1.27
PDE6A-205ENST00000617647 GHRLQ9UBU3 117 aa7.11□□□□□ -1.27
PDE6A-205ENST00000617647 BAZ2AQ9UIF9 1905 aaKnown RBP7.11□□□□□ -1.27
PDE6A-205ENST00000617647 ZNF225Q9UK10 706 aa7.11□□□□□ -1.27
PDE6A-205ENST00000617647 ERVW-1Q9UQF0 538 aa7.11□□□□□ -1.27
PDE6A-205ENST00000617647 NUBP2Q9Y5Y2 271 aa7.11□□□□□ -1.27
PDE6A-205ENST00000617647 MRPL42Q9Y6G3 142 aaKnown RBP7.11□□□□□ -1.27
PDE6A-205ENST00000617647 BCORQ6W2J9 1755 aa7.11□□□□□ -1.27
PDE6A-205ENST00000617647 NRCAMQ92823 1304 aa7.11□□□□□ -1.27
PDE6A-205ENST00000617647 RGS14O43566 566 aa7.11□□□□□ -1.27
PDE6A-205ENST00000617647 EDIL3O43854 480 aa7.11□□□□□ -1.27
PDE6A-205ENST00000617647 MPZL2O60487 215 aa7.11□□□□□ -1.27
PDE6A-205ENST00000617647 EIF1BO60739 113 aaKnown RBP7.11□□□□□ -1.27
PDE6A-205ENST00000617647 ACPPP15309 386 aa7.11□□□□□ -1.27
PDE6A-205ENST00000617647 EIF1P41567 113 aaKnown RBP7.11□□□□□ -1.27
PDE6A-205ENST00000617647 CTBP2P56545 445 aa7.11□□□□□ -1.27
PDE6A-205ENST00000617647 MAD2L1Q13257 205 aaPredicted RBP7.11□□□□□ -1.27
PDE6A-205ENST00000617647 DDX39BQ13838 428 aaKnown RBP7.11□□□□□ -1.27
PDE6A-205ENST00000617647 ATXN7L3Q14CW9 347 aaPredicted RBP7.11□□□□□ -1.27
PDE6A-205ENST00000617647 HFEQ30201 348 aa7.11□□□□□ -1.27
PDE6A-205ENST00000617647 ARMC6Q6NXE6 501 aa7.11□□□□□ -1.27
PDE6A-205ENST00000617647 LCLAT1Q6UWP7 414 aa7.11□□□□□ -1.27
PDE6A-205ENST00000617647 TFAP2EQ6VUC0 442 aa7.11□□□□□ -1.27
PDE6A-205ENST00000617647 GDPGP1Q6ZNW5 385 aa7.11□□□□□ -1.27
PDE6A-205ENST00000617647 SHFQ7M4L6 423 aa7.11□□□□□ -1.27
PDE6A-205ENST00000617647 TMEM179BQ7Z7N9 219 aa7.11□□□□□ -1.27
PDE6A-205ENST00000617647 GPSM1Q86YR5 675 aa7.11□□□□□ -1.27
PDE6A-205ENST00000617647 LIX1LQ8IVB5 337 aa7.11□□□□□ -1.27
PDE6A-205ENST00000617647 RIMKLAQ8IXN7 391 aa7.11□□□□□ -1.27
PDE6A-205ENST00000617647 BVESQ8NE79 360 aa7.11□□□□□ -1.27
PDE6A-205ENST00000617647 NETO1Q8TDF5 533 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms