RNA–Protein interactions for RNA: ENST00000616033.4

MSH6-214, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 3,429 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-214ENST00000616033 SLC37A3Q8NCC5 494 aa12.62□□□□□ -0.39
MSH6-214ENST00000616033 CIDECQ96AQ7 238 aaPredicted RBP12.62□□□□□ -0.39
MSH6-214ENST00000616033 FRG2BQ96QU4 278 aa12.62□□□□□ -0.39
MSH6-214ENST00000616033 SLC32A1Q9H598 525 aa12.62□□□□□ -0.39
MSH6-214ENST00000616033 IL17CQ9P0M4 197 aa12.62□□□□□ -0.39
MSH6-214ENST00000616033 HCSTQ9UBK5 93 aa12.62□□□□□ -0.39
MSH6-214ENST00000616033 ATP6V1HQ9UI12 483 aa12.62□□□□□ -0.39
MSH6-214ENST00000616033 SLC9A8Q9Y2E8 581 aa12.62□□□□□ -0.39
MSH6-214ENST00000616033 ARID1BQ8NFD5 2236 aaPredicted RBP12.62□□□□□ -0.39
MSH6-214ENST00000616033 GABRR3A8MPY1 467 aa12.61□□□□□ -0.39
MSH6-214ENST00000616033 CSO75390 466 aaKnown RBP12.61□□□□□ -0.39
MSH6-214ENST00000616033 IL32P24001 234 aa12.61□□□□□ -0.39
MSH6-214ENST00000616033 EVI2BP34910 448 aa12.61□□□□□ -0.39
MSH6-214ENST00000616033 AVPR1BP47901 424 aa12.61□□□□□ -0.39
MSH6-214ENST00000616033 PSPHP78330 225 aa12.61□□□□□ -0.39
MSH6-214ENST00000616033 TUSC3Q13454 348 aa12.61□□□□□ -0.39
MSH6-214ENST00000616033 LARS2Q15031 903 aaKnown RBP12.61□□□□□ -0.39
MSH6-214ENST00000616033 IFI44LQ53G44 452 aa12.61□□□□□ -0.39
MSH6-214ENST00000616033 PLAG1Q6DJT9 500 aa12.61□□□□□ -0.39
MSH6-214ENST00000616033 CASP12Q6UXS9 341 aa12.61□□□□□ -0.39
MSH6-214ENST00000616033 PDZD3Q86UT5 571 aa12.61□□□□□ -0.39
MSH6-214ENST00000616033 ATCAYQ86WG3 371 aa12.61□□□□□ -0.39
MSH6-214ENST00000616033 VRK3Q8IV63 474 aa12.61□□□□□ -0.39
MSH6-214ENST00000616033 FAM193BQ96PV7 902 aaPredicted RBP12.61□□□□□ -0.39
MSH6-214ENST00000616033 SIGLEC11Q96RL6 698 aa12.61□□□□□ -0.39
MSH6-214ENST00000616033 PITX2Q99697 317 aa12.61□□□□□ -0.39
MSH6-214ENST00000616033 TTLL2Q9BWV7 592 aa12.61□□□□□ -0.39
MSH6-214ENST00000616033 IL26Q9NPH9 171 aa12.61□□□□□ -0.39
MSH6-214ENST00000616033 ACOXLQ9NUZ1 547 aa12.61□□□□□ -0.39
MSH6-214ENST00000616033 TMCC3Q9ULS5 477 aa12.61□□□□□ -0.39
MSH6-214ENST00000616033 ABT1Q9ULW3 272 aaKnown RBP12.61□□□□□ -0.39
MSH6-214ENST00000616033 POFUT2Q9Y2G5 429 aa12.61□□□□□ -0.39
MSH6-214ENST00000616033 SNX11Q9Y5W9 270 aa12.61□□□□□ -0.39
MSH6-214ENST00000616033 DICER1Q9UPY3 1922 aaKnown RBP12.61□□□□□ -0.39
MSH6-214ENST00000616033 PRAMEF33A0A0G2JMD5 474 aa12.61□□□□□ -0.39
MSH6-214ENST00000616033 PRAMEF10O60809 474 aa12.61□□□□□ -0.39
MSH6-214ENST00000616033 KCNJ13O60928 360 aa12.61□□□□□ -0.39
MSH6-214ENST00000616033 MTRF1O75570 445 aaKnown RBP12.61□□□□□ -0.39
MSH6-214ENST00000616033 UGT2B17O75795 530 aa12.61□□□□□ -0.39
MSH6-214ENST00000616033 C6orf47O95873 294 aa12.61□□□□□ -0.39
MSH6-214ENST00000616033 MSL3P1P0C860 447 aa12.61□□□□□ -0.39
MSH6-214ENST00000616033 RPL17P18621 184 aaKnown RBP12.61□□□□□ -0.39
MSH6-214ENST00000616033 PBLDP30039 288 aaPredicted RBP12.61□□□□□ -0.39
MSH6-214ENST00000616033 MEF2AQ02078 507 aaPredicted RBP12.61□□□□□ -0.39
MSH6-214ENST00000616033 GPR19Q15760 415 aa12.61□□□□□ -0.39
MSH6-214ENST00000616033 TNFAIP8L2Q6P589 184 aaPredicted RBP12.61□□□□□ -0.39
MSH6-214ENST00000616033 KRT74Q7RTS7 529 aa12.61□□□□□ -0.39
MSH6-214ENST00000616033 ZNF367Q7RTV3 350 aa12.61□□□□□ -0.39
MSH6-214ENST00000616033 TMC8Q8IU68 726 aa12.61□□□□□ -0.39
MSH6-214ENST00000616033 FBXL6Q8N531 539 aa12.61□□□□□ -0.39
MSH6-214ENST00000616033 DNAJC5GQ8N7S2 189 aa12.61□□□□□ -0.39
MSH6-214ENST00000616033 HJURPQ8NCD3 748 aaPredicted RBP12.61□□□□□ -0.39
MSH6-214ENST00000616033 ARHGAP39Q9C0H5 1083 aa12.61□□□□□ -0.39
MSH6-214ENST00000616033 SCML2Q9UQR0 700 aa12.61□□□□□ -0.39
MSH6-214ENST00000616033 GPR52Q9Y2T5 361 aa12.61□□□□□ -0.39
MSH6-214ENST00000616033 OR2AG2A6NM03 316 aa12.6□□□□□ -0.39
MSH6-214ENST00000616033 TLR4O00206 839 aa12.6□□□□□ -0.39
MSH6-214ENST00000616033 HPGDSO60760 199 aa12.6□□□□□ -0.39
MSH6-214ENST00000616033 PRAMEF4O60810 478 aa12.6□□□□□ -0.39
MSH6-214ENST00000616033 AMD1P17707 334 aa12.6□□□□□ -0.39
MSH6-214ENST00000616033 EPORP19235 508 aa12.6□□□□□ -0.39
MSH6-214ENST00000616033 MAPK1P28482 360 aa12.6□□□□□ -0.39
MSH6-214ENST00000616033 CSNK2BP67870 215 aa12.6□□□□□ -0.39
MSH6-214ENST00000616033 RGNQ15493 299 aa12.6□□□□□ -0.39
MSH6-214ENST00000616033 MICAQ29983 383 aa12.6□□□□□ -0.39
MSH6-214ENST00000616033 ZXDCQ2QGD7 858 aaPredicted RBP12.6□□□□□ -0.39
MSH6-214ENST00000616033 PRAMEF9Q5VWM5 478 aa12.6□□□□□ -0.39
MSH6-214ENST00000616033 SERPINA13PQ6UXR4 307 aa12.6□□□□□ -0.39
MSH6-214ENST00000616033 CFAP77Q6ZQR2 320 aa12.6□□□□□ -0.39
MSH6-214ENST00000616033 RNF130Q86XS8 419 aa12.6□□□□□ -0.39
MSH6-214ENST00000616033 VPS37AQ8NEZ2 397 aa12.6□□□□□ -0.39
MSH6-214ENST00000616033 RNF170Q96K19 258 aa12.6□□□□□ -0.39
MSH6-214ENST00000616033 C17orf62Q9BQA9 187 aa12.6□□□□□ -0.39
MSH6-214ENST00000616033 ING3Q9NXR8 418 aa12.6□□□□□ -0.39
MSH6-214ENST00000616033 ATPIF1Q9UII2 106 aa12.6□□□□□ -0.39
MSH6-214ENST00000616033 ANXA8P13928 327 aa12.6□□□□□ -0.39
MSH6-214ENST00000616033 PTGER1P34995 402 aa12.6□□□□□ -0.39
MSH6-214ENST00000616033 MRPL19P49406 292 aaKnown RBP12.6□□□□□ -0.39
MSH6-214ENST00000616033 NFATC2Q13469 925 aa12.6□□□□□ -0.39
MSH6-214ENST00000616033 SCARB2Q14108 478 aa12.6□□□□□ -0.39
MSH6-214ENST00000616033 CLVS2Q5SYC1 327 aa12.6□□□□□ -0.39
MSH6-214ENST00000616033 LCN1P1Q5VSP4 162 aa12.6□□□□□ -0.39
MSH6-214ENST00000616033 TSEN54Q7Z6J9 526 aaKnown RBP12.6□□□□□ -0.39
MSH6-214ENST00000616033 ZBTB44Q8NCP5 570 aa12.6□□□□□ -0.39
MSH6-214ENST00000616033 LSM14AQ8ND56 463 aaKnown RBP12.6□□□□□ -0.39
MSH6-214ENST00000616033 RASSF5Q8WWW0 418 aa12.6□□□□□ -0.39
MSH6-214ENST00000616033 CRELD1Q96HD1 420 aa12.6□□□□□ -0.39
MSH6-214ENST00000616033 TMED9Q9BVK6 235 aa12.6□□□□□ -0.39
MSH6-214ENST00000616033 NXF2Q9GZY0 626 aaKnown RBP12.6□□□□□ -0.39
MSH6-214ENST00000616033 NMNAT1Q9HAN9 279 aaPredicted RBP12.6□□□□□ -0.39
MSH6-214ENST00000616033 PDFQ9HBH1 243 aa12.6□□□□□ -0.39
MSH6-214ENST00000616033 KLK4Q9Y5K2 254 aa12.6□□□□□ -0.39
MSH6-214ENST00000616033 GLYATL1P3A0A0U1RQE8 302 aa12.6□□□□□ -0.39
MSH6-214ENST00000616033 TRBC2A0A5B9 178 aa12.6□□□□□ -0.39
MSH6-214ENST00000616033 PLA2G10O15496 165 aa12.6□□□□□ -0.39
MSH6-214ENST00000616033 PRPS1L1P21108 318 aa12.6□□□□□ -0.39
MSH6-214ENST00000616033 MAP2K3P46734 347 aa12.6□□□□□ -0.39
MSH6-214ENST00000616033 ABATP80404 500 aa12.6□□□□□ -0.39
MSH6-214ENST00000616033 C1DQ13901 141 aaKnown RBP12.6□□□□□ -0.39
MSH6-214ENST00000616033 SUZ12Q15022 739 aaKnown RBP12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms