RNA–Protein interactions for RNA: ENST00000615061.4

CBWD3-211, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,771 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-211ENST00000615061 TCHHL1Q5QJ38 904 aaPredicted RBP15.7■□□□□ 0.1
CBWD3-211ENST00000615061 AGAP7PQ5VUJ5 663 aa15.7■□□□□ 0.1
CBWD3-211ENST00000615061 FRG2Q64ET8 278 aa15.7■□□□□ 0.1
CBWD3-211ENST00000615061 B3GNTL1Q67FW5 361 aaPredicted RBP15.7■□□□□ 0.1
CBWD3-211ENST00000615061 PAPD4Q6PIY7 484 aaKnown RBP15.7■□□□□ 0.1
CBWD3-211ENST00000615061 LINC00696Q6ZRV3 163 aa15.7■□□□□ 0.1
CBWD3-211ENST00000615061 TRABD2AQ86V40 505 aa15.7■□□□□ 0.1
CBWD3-211ENST00000615061 CNPY4Q8N129 248 aa15.7■□□□□ 0.1
CBWD3-211ENST00000615061 SRFBP1Q8NEF9 429 aaKnown RBP15.7■□□□□ 0.1
CBWD3-211ENST00000615061 AGAP4Q96P64 663 aa15.7■□□□□ 0.1
CBWD3-211ENST00000615061 FRG2BQ96QU4 278 aa15.7■□□□□ 0.1
CBWD3-211ENST00000615061 PRDM9Q9NQV7 894 aa15.7■□□□□ 0.1
CBWD3-211ENST00000615061 PTGFRNQ9P2B2 879 aa15.7■□□□□ 0.1
CBWD3-211ENST00000615061 LGALS13Q9UHV8 139 aa15.7■□□□□ 0.1
CBWD3-211ENST00000615061 UBR5O95071 2799 aaPredicted RBP15.7■□□□□ 0.1
CBWD3-211ENST00000615061 SHANK1Q9Y566 2161 aa15.7■□□□□ 0.1
CBWD3-211ENST00000615061 COL12A1Q99715 3063 aa15.7■□□□□ 0.1
CBWD3-211ENST00000615061 MYOCOSA0A1B0GUC4 107 aa15.7■□□□□ 0.1
CBWD3-211ENST00000615061 PPP2R1BP30154 601 aa15.7■□□□□ 0.1
CBWD3-211ENST00000615061 CASRP41180 1078 aa15.7■□□□□ 0.1
CBWD3-211ENST00000615061 RAP1GDS1P52306 607 aa15.7■□□□□ 0.1
CBWD3-211ENST00000615061 BTBD16Q32M84 506 aa15.7■□□□□ 0.1
CBWD3-211ENST00000615061 GGTA1PQ4G0N0 100 aa15.7■□□□□ 0.1
CBWD3-211ENST00000615061 IRAK1BP1Q5VVH5 260 aa15.7■□□□□ 0.1
CBWD3-211ENST00000615061 TTC19Q6DKK2 380 aaPredicted RBP15.7■□□□□ 0.1
CBWD3-211ENST00000615061 OR4C11Q6IEV9 310 aa15.7■□□□□ 0.1
CBWD3-211ENST00000615061 ZYG11AQ6WRX3 759 aa15.7■□□□□ 0.1
CBWD3-211ENST00000615061 ATG14Q6ZNE5 492 aa15.7■□□□□ 0.1
CBWD3-211ENST00000615061 CLNKQ7Z7G1 428 aa15.7■□□□□ 0.1
CBWD3-211ENST00000615061 SLC22A9Q8IVM8 553 aa15.7■□□□□ 0.1
CBWD3-211ENST00000615061 RIBC1Q8N443 379 aaPredicted RBP15.7■□□□□ 0.1
CBWD3-211ENST00000615061 RGMAQ96B86 450 aa15.7■□□□□ 0.1
CBWD3-211ENST00000615061 L3HYPDHQ96EM0 354 aa15.7■□□□□ 0.1
CBWD3-211ENST00000615061 MAGEB10Q96LZ2 347 aaPredicted RBP15.7■□□□□ 0.1
CBWD3-211ENST00000615061 HBEGFQ99075 208 aa15.7■□□□□ 0.1
CBWD3-211ENST00000615061 C5AR2Q9P296 337 aa15.7■□□□□ 0.1
CBWD3-211ENST00000615061 FBXW2Q9UKT8 454 aa15.7■□□□□ 0.1
CBWD3-211ENST00000615061 GRID1Q9ULK0 1009 aa15.7■□□□□ 0.1
CBWD3-211ENST00000615061 TCRBV16S1A1N1A0A5B0 115 aa15.69■□□□□ 0.1
CBWD3-211ENST00000615061 A8MUA0 341 aa15.69■□□□□ 0.1
CBWD3-211ENST00000615061 FOXE1O00358 373 aaPredicted RBP15.69■□□□□ 0.1
CBWD3-211ENST00000615061 DPM1O60762 260 aa15.69■□□□□ 0.1
CBWD3-211ENST00000615061 EEDO75530 441 aaKnown RBP15.69■□□□□ 0.1
CBWD3-211ENST00000615061 SCELO95171 688 aa15.69■□□□□ 0.1
CBWD3-211ENST00000615061 MYL2P10916 166 aa15.69■□□□□ 0.1
CBWD3-211ENST00000615061 PTX3P26022 381 aaPredicted RBP15.69■□□□□ 0.1
CBWD3-211ENST00000615061 MLLT10P55197 1068 aa15.69■□□□□ 0.1
CBWD3-211ENST00000615061 TLE1Q04724 770 aa15.69■□□□□ 0.1
CBWD3-211ENST00000615061 ACTN3Q08043 901 aaPredicted RBP15.69■□□□□ 0.1
CBWD3-211ENST00000615061 SLC6A19Q695T7 634 aa15.69■□□□□ 0.1
CBWD3-211ENST00000615061 JMJD6Q6NYC1 403 aaPredicted RBP15.69■□□□□ 0.1
CBWD3-211ENST00000615061 SCUBE1Q8IWY4 988 aa15.69■□□□□ 0.1
CBWD3-211ENST00000615061 SRRM1Q8IYB3 904 aaKnown RBP15.69■□□□□ 0.1
CBWD3-211ENST00000615061 CDYL2Q8N8U2 506 aa15.69■□□□□ 0.1
CBWD3-211ENST00000615061 ROGDIQ9GZN7 287 aa15.69■□□□□ 0.1
CBWD3-211ENST00000615061 GSTO2Q9H4Y5 243 aa15.69■□□□□ 0.1
CBWD3-211ENST00000615061 PRTFDC1Q9NRG1 225 aa15.69■□□□□ 0.1
CBWD3-211ENST00000615061 GBAP04062 536 aa15.68■□□□□ 0.1
CBWD3-211ENST00000615061 CREB1P16220 341 aa15.68■□□□□ 0.1
CBWD3-211ENST00000615061 BSGP35613 385 aa15.68■□□□□ 0.1
CBWD3-211ENST00000615061 PHEXP78562 749 aa15.68■□□□□ 0.1
CBWD3-211ENST00000615061 SLC13A2Q13183 592 aa15.68■□□□□ 0.1
CBWD3-211ENST00000615061 SLAMF1Q13291 335 aa15.68■□□□□ 0.1
CBWD3-211ENST00000615061 CUL3Q13618 768 aa15.68■□□□□ 0.1
CBWD3-211ENST00000615061 CCDC153Q494R4 210 aa15.68■□□□□ 0.1
CBWD3-211ENST00000615061 PLAG1Q6DJT9 500 aa15.68■□□□□ 0.1
CBWD3-211ENST00000615061 IGFL3Q6UXB1 125 aa15.68■□□□□ 0.1
CBWD3-211ENST00000615061 RIPOR1Q6ZS17 1223 aa15.68■□□□□ 0.1
CBWD3-211ENST00000615061 CCNYL1Q8N7R7 359 aa15.68■□□□□ 0.1
CBWD3-211ENST00000615061 CCDC63Q8NA47 563 aa15.68■□□□□ 0.1
CBWD3-211ENST00000615061 Q8NA96 180 aa15.68■□□□□ 0.1
CBWD3-211ENST00000615061 LPAR4Q99677 370 aa15.68■□□□□ 0.1
CBWD3-211ENST00000615061 ROPN1BQ9BZX4 212 aaPredicted RBP15.68■□□□□ 0.1
CBWD3-211ENST00000615061 ELOVL6Q9H5J4 265 aa15.68■□□□□ 0.1
CBWD3-211ENST00000615061 ROPN1Q9HAT0 212 aaPredicted RBP15.68■□□□□ 0.1
CBWD3-211ENST00000615061 LYRM4Q9HD34 91 aa15.68■□□□□ 0.1
CBWD3-211ENST00000615061 TMPRSS11DO60235 418 aa15.67■□□□□ 0.1
CBWD3-211ENST00000615061 SPAG7O75391 227 aa15.67■□□□□ 0.1
CBWD3-211ENST00000615061 PRKRAO75569 313 aaKnown RBP15.67■□□□□ 0.1
CBWD3-211ENST00000615061 F10P00742 488 aa15.67■□□□□ 0.1
CBWD3-211ENST00000615061 PDYNP01213 254 aa15.67■□□□□ 0.1
CBWD3-211ENST00000615061 SOX11P35716 441 aa15.67■□□□□ 0.1
CBWD3-211ENST00000615061 NAGLUP54802 743 aa15.67■□□□□ 0.1
CBWD3-211ENST00000615061 ID2Q02363 134 aa15.67■□□□□ 0.1
CBWD3-211ENST00000615061 ZNF844Q08AG5 666 aa15.67■□□□□ 0.1
CBWD3-211ENST00000615061 IFT88Q13099 833 aa15.67■□□□□ 0.1
CBWD3-211ENST00000615061 FCRLBQ6BAA4 426 aa15.67■□□□□ 0.1
CBWD3-211ENST00000615061 IGFL2Q6UWQ7 119 aa15.67■□□□□ 0.1
CBWD3-211ENST00000615061 ISLR2Q6UXK2 745 aa15.67■□□□□ 0.1
CBWD3-211ENST00000615061 BANPQ8N9N5 519 aa15.67■□□□□ 0.1
CBWD3-211ENST00000615061 KCNA7Q96RP8 456 aa15.67■□□□□ 0.1
CBWD3-211ENST00000615061 ZNF382Q96SR6 550 aa15.67■□□□□ 0.1
CBWD3-211ENST00000615061 CENPKQ9BS16 269 aa15.67■□□□□ 0.1
CBWD3-211ENST00000615061 MRPL1Q9BYD6 325 aaKnown RBP15.67■□□□□ 0.1
CBWD3-211ENST00000615061 TRPS1Q9UHF7 1281 aa15.67■□□□□ 0.1
CBWD3-211ENST00000615061 MMACHCQ9Y4U1 282 aa15.67■□□□□ 0.1
CBWD3-211ENST00000615061 CROCCQ5TZA2 2017 aa15.67■□□□□ 0.1
CBWD3-211ENST00000615061 CLDN4O14493 209 aa15.67■□□□□ 0.1
CBWD3-211ENST00000615061 UBFD1O14562 309 aaKnown RBP15.67■□□□□ 0.1
CBWD3-211ENST00000615061 LDB3O75112 727 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms