RNA–Protein interactions for RNA: ENST00000613856.4

SLIRP-212, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SLIRP, Length 420 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-212ENST00000613856 ARHGEF39Q8N4T4 335 aa10.85□□□□□ -0.67
SLIRP-212ENST00000613856 CSNK1A1LQ8N752 337 aa10.85□□□□□ -0.67
SLIRP-212ENST00000613856 OR9I1Q8NGQ6 314 aa10.85□□□□□ -0.67
SLIRP-212ENST00000613856 PUM2Q8TB72 1066 aaKnown RBP eCLIP10.85□□□□□ -0.67
SLIRP-212ENST00000613856 UTP15Q8TED0 518 aaKnown RBP10.85□□□□□ -0.67
SLIRP-212ENST00000613856 TESCQ96BS2 214 aa10.85□□□□□ -0.67
SLIRP-212ENST00000613856 SMIM10Q96HG1 83 aa10.85□□□□□ -0.67
SLIRP-212ENST00000613856 TMEM74Q96NL1 305 aa10.85□□□□□ -0.67
SLIRP-212ENST00000613856 DEPDC7Q96QD5 511 aa10.85□□□□□ -0.67
SLIRP-212ENST00000613856 SLC25A23Q9BV35 468 aa10.85□□□□□ -0.67
SLIRP-212ENST00000613856 EBPLQ9BY08 206 aa10.85□□□□□ -0.67
SLIRP-212ENST00000613856 ROGDIQ9GZN7 287 aa10.85□□□□□ -0.67
SLIRP-212ENST00000613856 KLHL31Q9H511 634 aa10.85□□□□□ -0.67
SLIRP-212ENST00000613856 WDR70Q9NW82 654 aa10.85□□□□□ -0.67
SLIRP-212ENST00000613856 CROCCQ5TZA2 2017 aa10.84□□□□□ -0.67
SLIRP-212ENST00000613856 A0A088AWK7 358 aa10.84□□□□□ -0.67
SLIRP-212ENST00000613856 GNG14A0A1W2PPG7 69 aa10.84□□□□□ -0.67
SLIRP-212ENST00000613856 FITM1A5D6W6 292 aa10.84□□□□□ -0.67
SLIRP-212ENST00000613856 D6RAR5 112 aa10.84□□□□□ -0.67
SLIRP-212ENST00000613856 SAP18O00422 153 aaKnown RBP10.84□□□□□ -0.67
SLIRP-212ENST00000613856 HCRTR1O43613 425 aa10.84□□□□□ -0.67
SLIRP-212ENST00000613856 EEDO75530 441 aaKnown RBP10.84□□□□□ -0.67
SLIRP-212ENST00000613856 KLHL18O94889 574 aa10.84□□□□□ -0.67
SLIRP-212ENST00000613856 KLK1P06870 262 aa10.84□□□□□ -0.67
SLIRP-212ENST00000613856 SNRPB2P08579 225 aaKnown RBP10.84□□□□□ -0.67
SLIRP-212ENST00000613856 ESRRAP11474 423 aaPredicted RBP10.84□□□□□ -0.67
SLIRP-212ENST00000613856 PRPS1L1P21108 318 aa10.84□□□□□ -0.67
SLIRP-212ENST00000613856 ZNF10P21506 573 aaPredicted RBP10.84□□□□□ -0.67
SLIRP-212ENST00000613856 HIST1H1TP22492 207 aaPredicted RBP10.84□□□□□ -0.67
SLIRP-212ENST00000613856 IL12AP29459 219 aa10.84□□□□□ -0.67
SLIRP-212ENST00000613856 RPL3P39023 403 aaKnown RBP10.84□□□□□ -0.67
SLIRP-212ENST00000613856 SSR2P43308 183 aa10.84□□□□□ -0.67
SLIRP-212ENST00000613856 MNAT1P51948 309 aa10.84□□□□□ -0.67
SLIRP-212ENST00000613856 EMP3P54852 163 aa10.84□□□□□ -0.67
SLIRP-212ENST00000613856 VSX2P58304 361 aaPredicted RBP10.84□□□□□ -0.67
SLIRP-212ENST00000613856 TRA2AQ13595 282 aaKnown RBP eCLIP10.84□□□□□ -0.67
SLIRP-212ENST00000613856 CYLC2Q14093 348 aaPredicted RBP10.84□□□□□ -0.67
SLIRP-212ENST00000613856 TGIF1Q15583 401 aa10.84□□□□□ -0.67
SLIRP-212ENST00000613856 SPRED3Q2MJR0 410 aa10.84□□□□□ -0.67
SLIRP-212ENST00000613856 DPY19L1Q2PZI1 675 aa10.84□□□□□ -0.67
SLIRP-212ENST00000613856 DEFB110Q30KQ9 67 aa10.84□□□□□ -0.67
SLIRP-212ENST00000613856 COQ5Q5HYK3 327 aa10.84□□□□□ -0.67
SLIRP-212ENST00000613856 TCTE1Q5JU00 501 aa10.84□□□□□ -0.67
SLIRP-212ENST00000613856 TMTC4Q5T4D3 741 aa10.84□□□□□ -0.67
SLIRP-212ENST00000613856 OR4C11Q6IEV9 310 aa10.84□□□□□ -0.67
SLIRP-212ENST00000613856 NIPAL1Q6NVV3 410 aa10.84□□□□□ -0.67
SLIRP-212ENST00000613856 ZNF793Q6ZN11 406 aa10.84□□□□□ -0.67
SLIRP-212ENST00000613856 ZNF574Q6ZN55 896 aaPredicted RBP10.84□□□□□ -0.67
SLIRP-212ENST00000613856 ABHD13Q7L211 337 aa10.84□□□□□ -0.67
SLIRP-212ENST00000613856 ZNF771Q7L3S4 317 aaPredicted RBP10.84□□□□□ -0.67
SLIRP-212ENST00000613856 TMPRSS9Q7Z410 1059 aa10.84□□□□□ -0.67
SLIRP-212ENST00000613856 ARHGAP22Q7Z5H3 698 aa10.84□□□□□ -0.67
SLIRP-212ENST00000613856 SNX32Q86XE0 403 aa10.84□□□□□ -0.67
SLIRP-212ENST00000613856 SLITRK4Q8IW52 837 aa10.84□□□□□ -0.67
SLIRP-212ENST00000613856 RIMKLAQ8IXN7 391 aa10.84□□□□□ -0.67
SLIRP-212ENST00000613856 KCT2Q8NC54 265 aa10.84□□□□□ -0.67
SLIRP-212ENST00000613856 EXTL1Q92935 676 aa10.84□□□□□ -0.67
SLIRP-212ENST00000613856 ZNF764Q96H86 408 aaPredicted RBP10.84□□□□□ -0.67
SLIRP-212ENST00000613856 TEX37Q96LM6 180 aa10.84□□□□□ -0.67
SLIRP-212ENST00000613856 SLC46A1Q96NT5 459 aa10.84□□□□□ -0.67
SLIRP-212ENST00000613856 TSSK3Q96PN8 268 aa10.84□□□□□ -0.67
SLIRP-212ENST00000613856 TEFMQ96QE5 360 aaKnown RBP10.84□□□□□ -0.67
SLIRP-212ENST00000613856 GFM1Q96RP9 751 aaKnown RBP10.84□□□□□ -0.67
SLIRP-212ENST00000613856 ZBTB18Q99592 522 aa10.84□□□□□ -0.67
SLIRP-212ENST00000613856 C17orf62Q9BQA9 187 aa10.84□□□□□ -0.67
SLIRP-212ENST00000613856 DPH1Q9BZG8 443 aa10.84□□□□□ -0.67
SLIRP-212ENST00000613856 DPY30Q9C005 99 aa10.84□□□□□ -0.67
SLIRP-212ENST00000613856 SLC52A3Q9NQ40 469 aa10.84□□□□□ -0.67
SLIRP-212ENST00000613856 PRDM7Q9NQW5 492 aa10.84□□□□□ -0.67
SLIRP-212ENST00000613856 THSD1Q9NS62 852 aa10.84□□□□□ -0.67
SLIRP-212ENST00000613856 CCDC167Q9P0B6 97 aa10.84□□□□□ -0.67
SLIRP-212ENST00000613856 KLHL3Q9UH77 587 aa10.84□□□□□ -0.67
SLIRP-212ENST00000613856 ATXN7L1Q9ULK2 861 aaPredicted RBP10.84□□□□□ -0.67
SLIRP-212ENST00000613856 SLC22A7Q9Y694 548 aa10.84□□□□□ -0.67
SLIRP-212ENST00000613856 AHCTF1Q8WYP5 2266 aa10.84□□□□□ -0.67
SLIRP-212ENST00000613856 SPTBP11277 2137 aa10.84□□□□□ -0.67
SLIRP-212ENST00000613856 IGHV5-10-1A0A0J9YXX1 117 aa10.83□□□□□ -0.68
SLIRP-212ENST00000613856 ARHGAP10A1A4S6 786 aa10.83□□□□□ -0.68
SLIRP-212ENST00000613856 CDRT15L2A8MXV6 281 aa10.83□□□□□ -0.68
SLIRP-212ENST00000613856 RTCAO00442 366 aaKnown RBP10.83□□□□□ -0.68
SLIRP-212ENST00000613856 NR5A2O00482 541 aa10.83□□□□□ -0.68
SLIRP-212ENST00000613856 TBX19O60806 448 aa10.83□□□□□ -0.68
SLIRP-212ENST00000613856 STATHP02808 62 aa10.83□□□□□ -0.68
SLIRP-212ENST00000613856 FAM87AP0C7U9 286 aa10.83□□□□□ -0.68
SLIRP-212ENST00000613856 ZNF888P0CJ79 500 aaPredicted RBP10.83□□□□□ -0.68
SLIRP-212ENST00000613856 ALOX12P18054 663 aa10.83□□□□□ -0.68
SLIRP-212ENST00000613856 ATP5A1P25705 553 aaKnown RBP10.83□□□□□ -0.68
SLIRP-212ENST00000613856 HPCAL1P37235 193 aa10.83□□□□□ -0.68
SLIRP-212ENST00000613856 ARL4DP49703 201 aa10.83□□□□□ -0.68
SLIRP-212ENST00000613856 RASSF2P50749 326 aa10.83□□□□□ -0.68
SLIRP-212ENST00000613856 POLR2JP52435 117 aaKnown RBP10.83□□□□□ -0.68
SLIRP-212ENST00000613856 PDX1P52945 283 aa10.83□□□□□ -0.68
SLIRP-212ENST00000613856 MAPK12P53778 367 aa10.83□□□□□ -0.68
SLIRP-212ENST00000613856 PLA2G16P53816 162 aa10.83□□□□□ -0.68
SLIRP-212ENST00000613856 MTTPP55157 894 aa10.83□□□□□ -0.68
SLIRP-212ENST00000613856 NME5P56597 212 aa10.83□□□□□ -0.68
SLIRP-212ENST00000613856 KCNK10P57789 538 aa10.83□□□□□ -0.68
SLIRP-212ENST00000613856 STX5Q13190 355 aa10.83□□□□□ -0.68
SLIRP-212ENST00000613856 PDE7AQ13946 482 aa10.83□□□□□ -0.68
SLIRP-212ENST00000613856 HKDC1Q2TB90 917 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms