RNA–Protein interactions for RNA: ENST00000613122.4

CTDP1-208, Transcript of CTD phosphatase subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CTDP1, Length 5,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-208ENST00000613122 PCDHGA3Q9Y5H0 932 aa19.41■□□□□ 0.7
CTDP1-208ENST00000613122 ATP4BP51164 291 aa19.41■□□□□ 0.7
CTDP1-208ENST00000613122 LIN52Q52LA3 116 aa19.41■□□□□ 0.7
CTDP1-208ENST00000613122 PSAPL1Q6NUJ1 521 aa19.41■□□□□ 0.7
CTDP1-208ENST00000613122 GALNT12Q8IXK2 581 aa19.41■□□□□ 0.7
CTDP1-208ENST00000613122 STON2Q8WXE9 905 aa19.41■□□□□ 0.7
CTDP1-208ENST00000613122 TTYH2Q9BSA4 534 aa19.41■□□□□ 0.7
CTDP1-208ENST00000613122 ORC5O43913 435 aa19.4■□□□□ 0.7
CTDP1-208ENST00000613122 SOX14O95416 240 aa19.4■□□□□ 0.7
CTDP1-208ENST00000613122 HNRNPA2B1P22626 353 aaKnown RBP19.4■□□□□ 0.7
CTDP1-208ENST00000613122 RPS3AP61247 264 aaKnown RBP19.4■□□□□ 0.7
CTDP1-208ENST00000613122 WDR5P61964 334 aaKnown RBP19.4■□□□□ 0.7
CTDP1-208ENST00000613122 ZFP69Q49AA0 526 aa19.4■□□□□ 0.7
CTDP1-208ENST00000613122 LMO3Q8TAP4 145 aa19.4■□□□□ 0.7
CTDP1-208ENST00000613122 FCRL3Q96P31 734 aaPredicted RBP19.4■□□□□ 0.7
CTDP1-208ENST00000613122 OR1F2PQ96R84 312 aa19.4■□□□□ 0.7
CTDP1-208ENST00000613122 TMED9Q9BVK6 235 aa19.4■□□□□ 0.7
CTDP1-208ENST00000613122 ZNF395Q9H8N7 513 aaPredicted RBP19.4■□□□□ 0.7
CTDP1-208ENST00000613122 SP140LQ9H930 580 aa19.4■□□□□ 0.7
CTDP1-208ENST00000613122 FEZF1A0PJY2 475 aa19.4■□□□□ 0.7
CTDP1-208ENST00000613122 DIRAS1O95057 198 aa19.4■□□□□ 0.7
CTDP1-208ENST00000613122 SPINT3P49223 89 aa19.4■□□□□ 0.7
CTDP1-208ENST00000613122 OR2B6P58173 313 aa19.4■□□□□ 0.7
CTDP1-208ENST00000613122 LPAL2Q16609 132 aa19.4■□□□□ 0.7
CTDP1-208ENST00000613122 SMYD5Q6GMV2 418 aa19.4■□□□□ 0.7
CTDP1-208ENST00000613122 IGDCC3Q8IVU1 814 aa19.4■□□□□ 0.7
CTDP1-208ENST00000613122 BIRC7Q96CA5 298 aa19.4■□□□□ 0.7
CTDP1-208ENST00000613122 RHCGQ9UBD6 479 aa19.4■□□□□ 0.7
CTDP1-208ENST00000613122 GIMAP2Q9UG22 337 aa19.4■□□□□ 0.7
CTDP1-208ENST00000613122 SLC7A8Q9UHI5 535 aa19.4■□□□□ 0.7
CTDP1-208ENST00000613122 MGAT4BQ9UQ53 548 aa19.4■□□□□ 0.7
CTDP1-208ENST00000613122 LRP6O75581 1613 aa19.4■□□□□ 0.7
CTDP1-208ENST00000613122 MYOCOSA0A1B0GUC4 107 aa19.4■□□□□ 0.7
CTDP1-208ENST00000613122 CIB4A0PJX0 185 aa19.4■□□□□ 0.7
CTDP1-208ENST00000613122 BHMG1C9JSJ3 638 aaPredicted RBP19.4■□□□□ 0.7
CTDP1-208ENST00000613122 C11orf98E9PRG8 122 aa19.4■□□□□ 0.7
CTDP1-208ENST00000613122 PLD2O14939 933 aa19.4■□□□□ 0.7
CTDP1-208ENST00000613122 H6PDO95479 791 aa19.4■□□□□ 0.7
CTDP1-208ENST00000613122 CKMT2P17540 419 aa19.4■□□□□ 0.7
CTDP1-208ENST00000613122 OTX2P32243 289 aa19.4■□□□□ 0.7
CTDP1-208ENST00000613122 ODF4Q2M2E3 257 aa19.4■□□□□ 0.7
CTDP1-208ENST00000613122 NXPE4Q6UWF7 544 aa19.4■□□□□ 0.7
CTDP1-208ENST00000613122 WDTC1Q8N5D0 677 aa19.4■□□□□ 0.7
CTDP1-208ENST00000613122 ZNF283Q8N7M2 679 aa19.4■□□□□ 0.7
CTDP1-208ENST00000613122 RPLP0P6Q8NHW5 317 aa19.4■□□□□ 0.7
CTDP1-208ENST00000613122 RHEBL1Q8TAI7 183 aa19.4■□□□□ 0.7
CTDP1-208ENST00000613122 TM9SF3Q9HD45 589 aa19.4■□□□□ 0.7
CTDP1-208ENST00000613122 PFDN2Q9UHV9 154 aa19.4■□□□□ 0.7
CTDP1-208ENST00000613122 L7N2F9 121 aa19.4■□□□□ 0.7
CTDP1-208ENST00000613122 VAMP2P63027 116 aa19.4■□□□□ 0.7
CTDP1-208ENST00000613122 ROR2Q01974 943 aaKnown RBP19.4■□□□□ 0.7
CTDP1-208ENST00000613122 GRM7Q14831 915 aa19.4■□□□□ 0.7
CTDP1-208ENST00000613122 SPATS1Q496A3 300 aa19.4■□□□□ 0.7
CTDP1-208ENST00000613122 EGFLAMQ63HQ2 1017 aa19.4■□□□□ 0.7
CTDP1-208ENST00000613122 OR52E8Q6IFG1 317 aa19.4■□□□□ 0.7
CTDP1-208ENST00000613122 ZNF227Q86WZ6 799 aa19.4■□□□□ 0.7
CTDP1-208ENST00000613122 GDE1Q9NZC3 331 aa19.4■□□□□ 0.7
CTDP1-208ENST00000613122 TEX13CA0A0J9YWL9 993 aa19.4■□□□□ 0.7
CTDP1-208ENST00000613122 C5orf51A6NDU8 294 aa19.4■□□□□ 0.7
CTDP1-208ENST00000613122 ZNF821O75541 412 aaPredicted RBP19.4■□□□□ 0.7
CTDP1-208ENST00000613122 RAB39AQ14964 217 aa19.4■□□□□ 0.7
CTDP1-208ENST00000613122 TMEM35AQ53FP2 167 aa19.4■□□□□ 0.7
CTDP1-208ENST00000613122 SPIN3Q5JUX0 258 aa19.4■□□□□ 0.7
CTDP1-208ENST00000613122 RAET1LQ5VY80 246 aa19.4■□□□□ 0.7
CTDP1-208ENST00000613122 OR10Q1Q8NGQ4 319 aa19.4■□□□□ 0.7
CTDP1-208ENST00000613122 PHOSPHO2Q8TCD6 241 aa19.4■□□□□ 0.7
CTDP1-208ENST00000613122 OR51I1Q9H343 314 aa19.4■□□□□ 0.7
CTDP1-208ENST00000613122 MEIS3P2A8K0S8 358 aa19.39■□□□□ 0.7
CTDP1-208ENST00000613122 PDLIM1O00151 329 aa19.39■□□□□ 0.7
CTDP1-208ENST00000613122 C15orf40Q8WUR7 153 aa19.39■□□□□ 0.7
CTDP1-208ENST00000613122 PHRF1Q9P1Y6 1649 aaKnown RBP19.39■□□□□ 0.69
CTDP1-208ENST00000613122 KDM4BO94953 1096 aa19.39■□□□□ 0.69
CTDP1-208ENST00000613122 TCEAL1Q15170 157 aa19.39■□□□□ 0.69
CTDP1-208ENST00000613122 TMPPEQ6ZT21 453 aa19.39■□□□□ 0.69
CTDP1-208ENST00000613122 CDC40O60508 579 aaKnown RBP eCLIP19.39■□□□□ 0.69
CTDP1-208ENST00000613122 S1PR4O95977 384 aa19.39■□□□□ 0.69
CTDP1-208ENST00000613122 APOC1P02654 83 aa19.39■□□□□ 0.69
CTDP1-208ENST00000613122 CEBPGP53567 150 aa19.39■□□□□ 0.69
CTDP1-208ENST00000613122 ARPC4P59998 168 aa19.39■□□□□ 0.69
CTDP1-208ENST00000613122 CBLBQ13191 982 aa19.39■□□□□ 0.69
CTDP1-208ENST00000613122 RABL3Q5HYI8 236 aa19.39■□□□□ 0.69
CTDP1-208ENST00000613122 UNC5DQ6UXZ4 953 aa19.39■□□□□ 0.69
CTDP1-208ENST00000613122 CCDC107Q8WV48 283 aa19.39■□□□□ 0.69
CTDP1-208ENST00000613122 F2RL3Q96RI0 385 aa19.39■□□□□ 0.69
CTDP1-208ENST00000613122 LOC100130705A0A1B0GUX0 176 aa19.39■□□□□ 0.69
CTDP1-208ENST00000613122 ACOX3O15254 700 aa19.39■□□□□ 0.69
CTDP1-208ENST00000613122 MAPK3P27361 379 aaPredicted RBP19.39■□□□□ 0.69
CTDP1-208ENST00000613122 FAM69BQ5VUD6 431 aa19.39■□□□□ 0.69
CTDP1-208ENST00000613122 PLD6Q8N2A8 252 aaKnown RBP19.39■□□□□ 0.69
CTDP1-208ENST00000613122 TMEM203Q969S6 136 aa19.39■□□□□ 0.69
CTDP1-208ENST00000613122 RPF2Q9H7B2 306 aaKnown RBP19.39■□□□□ 0.69
CTDP1-208ENST00000613122 SMURF1Q9HCE7 757 aa19.39■□□□□ 0.69
CTDP1-208ENST00000613122 HCN4Q9Y3Q4 1203 aa19.39■□□□□ 0.69
CTDP1-208ENST00000613122 PTNP21246 168 aa19.38■□□□□ 0.69
CTDP1-208ENST00000613122 NNATQ16517 81 aa19.38■□□□□ 0.69
CTDP1-208ENST00000613122 ZNF782Q6ZMW2 699 aaPredicted RBP19.38■□□□□ 0.69
CTDP1-208ENST00000613122 OSBPL7Q9BZF2 842 aa19.38■□□□□ 0.69
CTDP1-208ENST00000613122 BRF2Q9HAW0 419 aa19.38■□□□□ 0.69
CTDP1-208ENST00000613122 PLEKHA6Q9Y2H5 1048 aa19.38■□□□□ 0.69
CTDP1-208ENST00000613122 LILRB3O75022 631 aa19.38■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms