RNA–Protein interactions for RNA: ENST00000612856.4

FAM3A-221, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 3,995 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-221ENST00000612856 HSPB11Q9Y547 144 aa10.41□□□□□ -0.74
FAM3A-221ENST00000612856 LYVE1Q9Y5Y7 322 aa10.41□□□□□ -0.74
FAM3A-221ENST00000612856 PRSS21Q9Y6M0 314 aa10.41□□□□□ -0.74
FAM3A-221ENST00000612856 SCN4AP35499 1836 aa10.41□□□□□ -0.74
FAM3A-221ENST00000612856 BCKDKO14874 412 aa10.41□□□□□ -0.74
FAM3A-221ENST00000612856 PSMB5P28074 263 aa10.41□□□□□ -0.74
FAM3A-221ENST00000612856 CASP3P42574 277 aa10.41□□□□□ -0.74
FAM3A-221ENST00000612856 BCL2A1Q16548 175 aa10.41□□□□□ -0.74
FAM3A-221ENST00000612856 CYBRD1Q53TN4 286 aa10.41□□□□□ -0.74
FAM3A-221ENST00000612856 STEAP3Q658P3 488 aa10.41□□□□□ -0.74
FAM3A-221ENST00000612856 DEF8Q6ZN54 512 aa10.41□□□□□ -0.74
FAM3A-221ENST00000612856 TMEM135Q86UB9 458 aa10.41□□□□□ -0.74
FAM3A-221ENST00000612856 PACRGLQ8N7B6 248 aa10.41□□□□□ -0.74
FAM3A-221ENST00000612856 DNAJC5GQ8N7S2 189 aa10.41□□□□□ -0.74
FAM3A-221ENST00000612856 VN1R2Q8NFZ6 395 aa10.41□□□□□ -0.74
FAM3A-221ENST00000612856 IPCEF1Q8WWN9 437 aaPredicted RBP10.41□□□□□ -0.74
FAM3A-221ENST00000612856 STON2Q8WXE9 905 aa10.41□□□□□ -0.74
FAM3A-221ENST00000612856 LRRC58Q96CX6 371 aa10.41□□□□□ -0.74
FAM3A-221ENST00000612856 AURKBQ96GD4 344 aaPredicted RBP10.41□□□□□ -0.74
FAM3A-221ENST00000612856 QRFPRQ96P65 431 aa10.41□□□□□ -0.74
FAM3A-221ENST00000612856 GPR22Q99680 433 aa10.41□□□□□ -0.74
FAM3A-221ENST00000612856 OR8D2Q9GZM6 311 aa10.41□□□□□ -0.74
FAM3A-221ENST00000612856 C6orf106Q9H6K1 298 aaPredicted RBP10.41□□□□□ -0.74
FAM3A-221ENST00000612856 ABCB9Q9NP78 766 aa10.41□□□□□ -0.74
FAM3A-221ENST00000612856 TMCC3Q9ULS5 477 aa10.41□□□□□ -0.74
FAM3A-221ENST00000612856 B3GNT3Q9Y2A9 372 aa10.41□□□□□ -0.74
FAM3A-221ENST00000612856 CCDC182A6NF36 153 aa10.41□□□□□ -0.74
FAM3A-221ENST00000612856 AQP12BA6NM10 295 aa10.41□□□□□ -0.74
FAM3A-221ENST00000612856 H0YJX3 145 aa10.41□□□□□ -0.74
FAM3A-221ENST00000612856 OPN1SWP03999 348 aa10.41□□□□□ -0.74
FAM3A-221ENST00000612856 GPIP06744 558 aa10.41□□□□□ -0.74
FAM3A-221ENST00000612856 GABRB3P28472 473 aa10.41□□□□□ -0.74
FAM3A-221ENST00000612856 SLC26A3P40879 764 aa10.41□□□□□ -0.74
FAM3A-221ENST00000612856 RPL34P49207 117 aaKnown RBP10.41□□□□□ -0.74
FAM3A-221ENST00000612856 DIO3P55073 304 aa10.41□□□□□ -0.74
FAM3A-221ENST00000612856 IFITM3Q01628 133 aa10.41□□□□□ -0.74
FAM3A-221ENST00000612856 MESP2Q0VG99 397 aa10.41□□□□□ -0.74
FAM3A-221ENST00000612856 MAD2L1Q13257 205 aaPredicted RBP10.41□□□□□ -0.74
FAM3A-221ENST00000612856 PTGR1Q14914 329 aa10.41□□□□□ -0.74
FAM3A-221ENST00000612856 ZNF404Q494X3 552 aa10.41□□□□□ -0.74
FAM3A-221ENST00000612856 TRIM61Q5EBN2 209 aa10.41□□□□□ -0.74
FAM3A-221ENST00000612856 ASTLQ6HA08 431 aaPredicted RBP10.41□□□□□ -0.74
FAM3A-221ENST00000612856 TTLL10Q6ZVT0 673 aa10.41□□□□□ -0.74
FAM3A-221ENST00000612856 PLEKHM3Q6ZWE6 761 aa10.41□□□□□ -0.74
FAM3A-221ENST00000612856 LIMS2Q7Z4I7 341 aa10.41□□□□□ -0.74
FAM3A-221ENST00000612856 EPHX4Q8IUS5 362 aa10.41□□□□□ -0.74
FAM3A-221ENST00000612856 AQP12AQ8IXF9 295 aa10.41□□□□□ -0.74
FAM3A-221ENST00000612856 STX19Q8N4C7 294 aa10.41□□□□□ -0.74
FAM3A-221ENST00000612856 SPERTQ8NA61 448 aa10.41□□□□□ -0.74
FAM3A-221ENST00000612856 GRPEL2Q8TAA5 225 aa10.41□□□□□ -0.74
FAM3A-221ENST00000612856 ADAMTS15Q8TE58 950 aa10.41□□□□□ -0.74
FAM3A-221ENST00000612856 SNAPC3Q92966 411 aa10.41□□□□□ -0.74
FAM3A-221ENST00000612856 CSF3RQ99062 836 aa10.41□□□□□ -0.74
FAM3A-221ENST00000612856 HOPXQ9BPY8 73 aaPredicted RBP10.41□□□□□ -0.74
FAM3A-221ENST00000612856 KAT8Q9H7Z6 458 aaKnown RBP10.41□□□□□ -0.74
FAM3A-221ENST00000612856 AKTIPQ9H8T0 292 aa10.41□□□□□ -0.74
FAM3A-221ENST00000612856 MKS1Q9NXB0 559 aa10.41□□□□□ -0.74
FAM3A-221ENST00000612856 KLHL28Q9NXS3 571 aa10.41□□□□□ -0.74
FAM3A-221ENST00000612856 NCOR2Q9Y618 2525 aa10.4□□□□□ -0.74
FAM3A-221ENST00000612856 PNMA8CA0A1B0GUJ8 204 aa10.4□□□□□ -0.74
FAM3A-221ENST00000612856 DRGXA6NNA5 263 aa10.4□□□□□ -0.74
FAM3A-221ENST00000612856 MXD1Q05195 221 aa10.4□□□□□ -0.74
FAM3A-221ENST00000612856 CD47Q08722 323 aa10.4□□□□□ -0.74
FAM3A-221ENST00000612856 CATSPEREQ5SY80 951 aa10.4□□□□□ -0.74
FAM3A-221ENST00000612856 TUBA3EQ6PEY2 450 aa10.4□□□□□ -0.74
FAM3A-221ENST00000612856 TBPL2Q6SJ96 375 aa10.4□□□□□ -0.74
FAM3A-221ENST00000612856 ZNF517Q6ZMY9 492 aaPredicted RBP10.4□□□□□ -0.74
FAM3A-221ENST00000612856 OR8H3Q8N146 312 aa10.4□□□□□ -0.74
FAM3A-221ENST00000612856 PLA2G15Q8NCC3 412 aa10.4□□□□□ -0.74
FAM3A-221ENST00000612856 MSANTD3Q96H12 275 aa10.4□□□□□ -0.74
FAM3A-221ENST00000612856 HOXD1Q9GZZ0 328 aa10.4□□□□□ -0.74
FAM3A-221ENST00000612856 TIGARQ9NQ88 270 aa10.4□□□□□ -0.74
FAM3A-221ENST00000612856 PCDHGA11Q9Y5H2 935 aa10.4□□□□□ -0.74
FAM3A-221ENST00000612856 ZSWIM8A7E2V4 1837 aa10.4□□□□□ -0.74
FAM3A-221ENST00000612856 SMIM30A4D0T7 59 aa10.4□□□□□ -0.74
FAM3A-221ENST00000612856 JRKO75564 520 aa10.4□□□□□ -0.74
FAM3A-221ENST00000612856 JUPP14923 745 aa10.4□□□□□ -0.74
FAM3A-221ENST00000612856 LEPRP48357 1165 aaKnown RBP10.4□□□□□ -0.74
FAM3A-221ENST00000612856 IL18R1Q13478 541 aa10.4□□□□□ -0.74
FAM3A-221ENST00000612856 PRMT9Q6P2P2 845 aa10.4□□□□□ -0.74
FAM3A-221ENST00000612856 EID2Q8N6I1 236 aa10.4□□□□□ -0.74
FAM3A-221ENST00000612856 OR13J1Q8NGT2 312 aa10.4□□□□□ -0.74
FAM3A-221ENST00000612856 SMPDL3AQ92484 453 aa10.4□□□□□ -0.74
FAM3A-221ENST00000612856 DNASE1L2Q92874 299 aa10.4□□□□□ -0.74
FAM3A-221ENST00000612856 F2RL3Q96RI0 385 aa10.4□□□□□ -0.74
FAM3A-221ENST00000612856 NUSAP1Q9BXS6 441 aaKnown RBP10.4□□□□□ -0.74
FAM3A-221ENST00000612856 ZCCHC3Q9NUD5 404 aaKnown RBP10.4□□□□□ -0.74
FAM3A-221ENST00000612856 NUFIP1Q9UHK0 495 aaKnown RBP10.4□□□□□ -0.74
FAM3A-221ENST00000612856 FAM208BQ5VWN6 2430 aa10.4□□□□□ -0.75
FAM3A-221ENST00000612856 TCRBV3S1A0A5B6 114 aa10.4□□□□□ -0.75
FAM3A-221ENST00000612856 ZNF487B1APH4 448 aa10.4□□□□□ -0.75
FAM3A-221ENST00000612856 GSRP00390 522 aa10.4□□□□□ -0.75
FAM3A-221ENST00000612856 TFPIP10646 304 aa10.4□□□□□ -0.75
FAM3A-221ENST00000612856 PRKCAP17252 672 aa10.4□□□□□ -0.75
FAM3A-221ENST00000612856 ACRV1P26436 265 aa10.4□□□□□ -0.75
FAM3A-221ENST00000612856 MAGEA6P43360 314 aa10.4□□□□□ -0.75
FAM3A-221ENST00000612856 SLC15A1P46059 708 aa10.4□□□□□ -0.75
FAM3A-221ENST00000612856 MAZP56270 477 aaKnown RBP10.4□□□□□ -0.75
FAM3A-221ENST00000612856 IRF4Q15306 451 aa10.4□□□□□ -0.75
FAM3A-221ENST00000612856 ZNHIT3Q15649 155 aaPredicted RBP10.4□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms