RNA–Protein interactions for RNA: ENST00000612795.1

CSNK1E-215, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-215ENST00000612795 CHSY3Q70JA7 882 aa15.93■□□□□ 0.14
CSNK1E-215ENST00000612795 SCUBE1Q8IWY4 988 aa15.93■□□□□ 0.14
CSNK1E-215ENST00000612795 EEF1AKMT1Q8WVE0 214 aa15.93■□□□□ 0.14
CSNK1E-215ENST00000612795 SH3GL2Q99962 352 aa15.93■□□□□ 0.14
CSNK1E-215ENST00000612795 SPNS1Q9H2V7 528 aa15.93■□□□□ 0.14
CSNK1E-215ENST00000612795 SACM1LQ9NTJ5 587 aa15.93■□□□□ 0.14
CSNK1E-215ENST00000612795 MTRF1LQ9UGC7 380 aaKnown RBP15.93■□□□□ 0.14
CSNK1E-215ENST00000612795 TCRBV7S3A2A0A539 114 aa15.92■□□□□ 0.14
CSNK1E-215ENST00000612795 CLDN4O14493 209 aa15.92■□□□□ 0.14
CSNK1E-215ENST00000612795 GPR143P51810 404 aa15.92■□□□□ 0.14
CSNK1E-215ENST00000612795 DCAF7P61962 342 aa15.92■□□□□ 0.14
CSNK1E-215ENST00000612795 DAZAP2Q15038 168 aaPredicted RBP15.92■□□□□ 0.14
CSNK1E-215ENST00000612795 PCBP2Q15366 365 aaKnown RBP eCLIP15.92■□□□□ 0.14
CSNK1E-215ENST00000612795 ARMC3Q5W041 872 aa15.92■□□□□ 0.14
CSNK1E-215ENST00000612795 DUPD1Q68J44 220 aa15.92■□□□□ 0.14
CSNK1E-215ENST00000612795 HSDL2Q6YN16 418 aa15.92■□□□□ 0.14
CSNK1E-215ENST00000612795 PRIMA1Q86XR5 153 aa15.92■□□□□ 0.14
CSNK1E-215ENST00000612795 TXLNBQ8N3L3 684 aa15.92■□□□□ 0.14
CSNK1E-215ENST00000612795 GOLM1Q8NBJ4 401 aa15.92■□□□□ 0.14
CSNK1E-215ENST00000612795 TRPV3Q8NET8 790 aa15.92■□□□□ 0.14
CSNK1E-215ENST00000612795 SLC5A11Q8WWX8 675 aa15.92■□□□□ 0.14
CSNK1E-215ENST00000612795 FAR2Q96K12 515 aa15.92■□□□□ 0.14
CSNK1E-215ENST00000612795 SCYL1Q96KG9 808 aa15.92■□□□□ 0.14
CSNK1E-215ENST00000612795 TSNARE1Q96NA8 513 aa15.92■□□□□ 0.14
CSNK1E-215ENST00000612795 OR4K3Q96R72 315 aa15.92■□□□□ 0.14
CSNK1E-215ENST00000612795 TSPY26PQ9H489 355 aa15.92■□□□□ 0.14
CSNK1E-215ENST00000612795 KLHL31Q9H511 634 aa15.92■□□□□ 0.14
CSNK1E-215ENST00000612795 TUBA8Q9NY65 449 aaPredicted RBP15.92■□□□□ 0.14
CSNK1E-215ENST00000612795 SPRR3Q9UBC9 169 aa15.92■□□□□ 0.14
CSNK1E-215ENST00000612795 FOXD3Q9UJU5 478 aaPredicted RBP15.92■□□□□ 0.14
CSNK1E-215ENST00000612795 MRPS33Q9Y291 106 aaKnown RBP15.92■□□□□ 0.14
CSNK1E-215ENST00000612795 CLCA3PQ9Y6N3 262 aa15.92■□□□□ 0.14
CSNK1E-215ENST00000612795 CAPN6Q9Y6Q1 641 aa15.92■□□□□ 0.14
CSNK1E-215ENST00000612795 CSPG4Q6UVK1 2322 aa15.92■□□□□ 0.14
CSNK1E-215ENST00000612795 TUBAL3A6NHL2 446 aa15.91■□□□□ 0.14
CSNK1E-215ENST00000612795 KIAA1324LA8MWY0 1029 aaPredicted RBP15.91■□□□□ 0.14
CSNK1E-215ENST00000612795 C4orf51C9J302 202 aa15.91■□□□□ 0.14
CSNK1E-215ENST00000612795 NRDCO43847 1150 aa15.91■□□□□ 0.14
CSNK1E-215ENST00000612795 HCN1O60741 890 aa15.91■□□□□ 0.14
CSNK1E-215ENST00000612795 IFNA16P05015 189 aa15.91■□□□□ 0.14
CSNK1E-215ENST00000612795 SAT1P21673 171 aa15.91■□□□□ 0.14
CSNK1E-215ENST00000612795 HK2P52789 917 aa15.91■□□□□ 0.14
CSNK1E-215ENST00000612795 HSD17B7P56937 341 aa15.91■□□□□ 0.14
CSNK1E-215ENST00000612795 NKX6-1P78426 367 aaPredicted RBP15.91■□□□□ 0.14
CSNK1E-215ENST00000612795 CCZ1BP86790 482 aa15.91■□□□□ 0.14
CSNK1E-215ENST00000612795 CCZ1P86791 482 aaPredicted RBP15.91■□□□□ 0.14
CSNK1E-215ENST00000612795 REEP5Q00765 189 aa15.91■□□□□ 0.14
CSNK1E-215ENST00000612795 RBBP5Q15291 538 aaKnown RBP15.91■□□□□ 0.14
CSNK1E-215ENST00000612795 ELAVL1Q15717 326 aaKnown RBP15.91■□□□□ 0.14
CSNK1E-215ENST00000612795 CCNG2Q16589 344 aa15.91■□□□□ 0.14
CSNK1E-215ENST00000612795 HYAL4Q2M3T9 481 aa15.91■□□□□ 0.14
CSNK1E-215ENST00000612795 TMPRSS11BQ86T26 416 aa15.91■□□□□ 0.14
CSNK1E-215ENST00000612795 TMEM132CQ8N3T6 1108 aa15.91■□□□□ 0.14
CSNK1E-215ENST00000612795 FBXW8Q8N3Y1 598 aa15.91■□□□□ 0.14
CSNK1E-215ENST00000612795 ANKRD53Q8N9V6 530 aa15.91■□□□□ 0.14
CSNK1E-215ENST00000612795 OR56A3Q8NH54 315 aa15.91■□□□□ 0.14
CSNK1E-215ENST00000612795 CALML6Q8TD86 181 aa15.91■□□□□ 0.14
CSNK1E-215ENST00000612795 NEIL2Q969S2 332 aa15.91■□□□□ 0.14
CSNK1E-215ENST00000612795 LINGO1Q96FE5 620 aa15.91■□□□□ 0.14
CSNK1E-215ENST00000612795 SGCZQ96LD1 299 aa15.91■□□□□ 0.14
CSNK1E-215ENST00000612795 NDNQ99608 321 aa15.91■□□□□ 0.14
CSNK1E-215ENST00000612795 AIF1LQ9BQI0 150 aa15.91■□□□□ 0.14
CSNK1E-215ENST00000612795 C20orf96Q9NUD7 363 aaPredicted RBP15.91■□□□□ 0.14
CSNK1E-215ENST00000612795 DYRK1BQ9Y463 629 aa15.91■□□□□ 0.14
CSNK1E-215ENST00000612795 NINQ8N4C6 2090 aa15.91■□□□□ 0.14
CSNK1E-215ENST00000612795 CTAGE15A4D2H0 777 aa15.9■□□□□ 0.14
CSNK1E-215ENST00000612795 TGFBR3LH3BV60 316 aa15.9■□□□□ 0.14
CSNK1E-215ENST00000612795 HAUS5O94927 633 aa15.9■□□□□ 0.14
CSNK1E-215ENST00000612795 SERPINA6P08185 405 aa15.9■□□□□ 0.14
CSNK1E-215ENST00000612795 SMIM10L1P0DMW3 83 aa15.9■□□□□ 0.14
CSNK1E-215ENST00000612795 CCL3P10147 92 aa15.9■□□□□ 0.14
CSNK1E-215ENST00000612795 ENDOUP21128 410 aaKnown RBP15.9■□□□□ 0.14
CSNK1E-215ENST00000612795 BTN3A2P78410 334 aa15.9■□□□□ 0.14
CSNK1E-215ENST00000612795 BBS9Q3SYG4 887 aa15.9■□□□□ 0.14
CSNK1E-215ENST00000612795 FBXL19-AS1Q494R0 122 aa15.9■□□□□ 0.14
CSNK1E-215ENST00000612795 SHEQ5VZ18 495 aa15.9■□□□□ 0.14
CSNK1E-215ENST00000612795 OPN5Q6U736 354 aa15.9■□□□□ 0.14
CSNK1E-215ENST00000612795 CLNKQ7Z7G1 428 aa15.9■□□□□ 0.14
CSNK1E-215ENST00000612795 CTAGE6Q86UF2 777 aa15.9■□□□□ 0.14
CSNK1E-215ENST00000612795 LMNTD2Q8IXW0 634 aa15.9■□□□□ 0.14
CSNK1E-215ENST00000612795 ULK2Q8IYT8 1036 aa15.9■□□□□ 0.14
CSNK1E-215ENST00000612795 FAM47BQ8NA70 645 aa15.9■□□□□ 0.14
CSNK1E-215ENST00000612795 DAZLQ92904 295 aaKnown RBP15.9■□□□□ 0.14
CSNK1E-215ENST00000612795 SMIM10Q96HG1 83 aa15.9■□□□□ 0.14
CSNK1E-215ENST00000612795 TRIM54Q9BYV2 358 aa15.9■□□□□ 0.14
CSNK1E-215ENST00000612795 BEX4Q9NWD9 120 aaPredicted RBP15.9■□□□□ 0.14
CSNK1E-215ENST00000612795 TAS2R13Q9NYV9 303 aa15.9■□□□□ 0.14
CSNK1E-215ENST00000612795 FBXO5Q9UKT4 447 aa15.9■□□□□ 0.14
CSNK1E-215ENST00000612795 ATG4BQ9Y4P1 393 aa15.9■□□□□ 0.14
CSNK1E-215ENST00000612795 MAD1L1Q9Y6D9 718 aa15.9■□□□□ 0.14
CSNK1E-215ENST00000612795 A0A0G2JN53 185 aa15.89■□□□□ 0.13
CSNK1E-215ENST00000612795 SYNDIG1LA6NDD5 238 aa15.89■□□□□ 0.13
CSNK1E-215ENST00000612795 LY6G6DO95868 133 aa15.89■□□□□ 0.13
CSNK1E-215ENST00000612795 EPXP11678 715 aa15.89■□□□□ 0.13
CSNK1E-215ENST00000612795 PCSK6P29122 969 aa15.89■□□□□ 0.13
CSNK1E-215ENST00000612795 AP1S2P56377 157 aa15.89■□□□□ 0.13
CSNK1E-215ENST00000612795 RAB38P57729 211 aa15.89■□□□□ 0.13
CSNK1E-215ENST00000612795 STXBP1P61764 594 aaKnown RBP15.89■□□□□ 0.13
CSNK1E-215ENST00000612795 FOXO1Q12778 655 aa15.89■□□□□ 0.13
CSNK1E-215ENST00000612795 KCTD19Q17RG1 926 aaPredicted RBP15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms