RNA–Protein interactions for RNA: ENST00000607632.1

PRDM16-210, Transcript of PR/SET domain 16, humanhuman

TSL 2

Gene PRDM16, Length 581 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-210ENST00000607632 CSF3RQ99062 836 aa13.43□□□□□ -0.26
PRDM16-210ENST00000607632 NPAS2Q99743 824 aa13.43□□□□□ -0.26
PRDM16-210ENST00000607632 NOL11Q9H8H0 719 aaKnown RBP13.43□□□□□ -0.26
PRDM16-210ENST00000607632 RNF11Q9Y3C5 154 aa13.43□□□□□ -0.26
PRDM16-210ENST00000607632 PRRC2CQ9Y520 2896 aaKnown RBP13.42□□□□□ -0.26
PRDM16-210ENST00000607632 BLACEA4D250 179 aa13.42□□□□□ -0.26
PRDM16-210ENST00000607632 RTCAO00442 366 aaKnown RBP13.42□□□□□ -0.26
PRDM16-210ENST00000607632 PLPP1O14494 284 aa13.42□□□□□ -0.26
PRDM16-210ENST00000607632 PCNAP12004 261 aa13.42□□□□□ -0.26
PRDM16-210ENST00000607632 PTX3P26022 381 aaPredicted RBP13.42□□□□□ -0.26
PRDM16-210ENST00000607632 TNFSF10P50591 281 aa13.42□□□□□ -0.26
PRDM16-210ENST00000607632 GPR143P51810 404 aa13.42□□□□□ -0.26
PRDM16-210ENST00000607632 VSNL1P62760 191 aa13.42□□□□□ -0.26
PRDM16-210ENST00000607632 RCN2Q14257 317 aa13.42□□□□□ -0.26
PRDM16-210ENST00000607632 ZNF169Q14929 603 aaPredicted RBP13.42□□□□□ -0.26
PRDM16-210ENST00000607632 ZRSR2Q15696 482 aaKnown RBP13.42□□□□□ -0.26
PRDM16-210ENST00000607632 CPSF6Q16630 551 aaKnown RBP eCLIP13.42□□□□□ -0.26
PRDM16-210ENST00000607632 MRM1Q6IN84 353 aaKnown RBP13.42□□□□□ -0.26
PRDM16-210ENST00000607632 WDR93Q6P2C0 686 aa13.42□□□□□ -0.26
PRDM16-210ENST00000607632 DNAJB14Q8TBM8 379 aa13.42□□□□□ -0.26
PRDM16-210ENST00000607632 ILKAPQ9H0C8 392 aaPredicted RBP13.42□□□□□ -0.26
PRDM16-210ENST00000607632 OR51B5Q9H339 312 aa13.42□□□□□ -0.26
PRDM16-210ENST00000607632 COPS7BQ9H9Q2 264 aaPredicted RBP13.42□□□□□ -0.26
PRDM16-210ENST00000607632 PRTFDC1Q9NRG1 225 aa13.42□□□□□ -0.26
PRDM16-210ENST00000607632 LUZP4Q9P127 313 aa13.42□□□□□ -0.26
PRDM16-210ENST00000607632 ZNF225Q9UK10 706 aa13.42□□□□□ -0.26
PRDM16-210ENST00000607632 MRPS33Q9Y291 106 aaKnown RBP13.42□□□□□ -0.26
PRDM16-210ENST00000607632 A0A1B0GTL3 188 aa13.41□□□□□ -0.26
PRDM16-210ENST00000607632 CYSRT1A8MQ03 144 aa13.41□□□□□ -0.26
PRDM16-210ENST00000607632 CLDN4O14493 209 aa13.41□□□□□ -0.26
PRDM16-210ENST00000607632 DLX3O60479 287 aa13.41□□□□□ -0.26
PRDM16-210ENST00000607632 CTNSO60931 367 aa13.41□□□□□ -0.26
PRDM16-210ENST00000607632 SEMA3DO95025 777 aa13.41□□□□□ -0.26
PRDM16-210ENST00000607632 SLU7O95391 586 aaKnown RBP13.41□□□□□ -0.26
PRDM16-210ENST00000607632 ETHE1O95571 254 aa13.41□□□□□ -0.26
PRDM16-210ENST00000607632 NUDT17P0C025 328 aa13.41□□□□□ -0.26
PRDM16-210ENST00000607632 PYGBP11216 843 aa13.41□□□□□ -0.26
PRDM16-210ENST00000607632 CCNG1P51959 295 aa13.41□□□□□ -0.26
PRDM16-210ENST00000607632 RPS13P62277 151 aaKnown RBP13.41□□□□□ -0.26
PRDM16-210ENST00000607632 HERVK_113P63132 956 aa13.41□□□□□ -0.26
PRDM16-210ENST00000607632 IGLV3-21P80748 117 aaPredicted RBP13.41□□□□□ -0.26
PRDM16-210ENST00000607632 ACTN3Q08043 901 aaPredicted RBP13.41□□□□□ -0.26
PRDM16-210ENST00000607632 AP5B1Q2VPB7 878 aa13.41□□□□□ -0.26
PRDM16-210ENST00000607632 ZNF678Q5SXM1 525 aa13.41□□□□□ -0.26
PRDM16-210ENST00000607632 OR4C11Q6IEV9 310 aa13.41□□□□□ -0.26
PRDM16-210ENST00000607632 FAM47BQ8NA70 645 aa13.41□□□□□ -0.26
PRDM16-210ENST00000607632 APCDD1LQ8NCL9 501 aa13.41□□□□□ -0.26
PRDM16-210ENST00000607632 ARMC2Q8NEN0 867 aa13.41□□□□□ -0.26
PRDM16-210ENST00000607632 UBLCP1Q8WVY7 318 aaPredicted RBP13.41□□□□□ -0.26
PRDM16-210ENST00000607632 RGMAQ96B86 450 aa13.41□□□□□ -0.26
PRDM16-210ENST00000607632 ZNF354BQ96LW1 612 aa13.41□□□□□ -0.26
PRDM16-210ENST00000607632 MAGEB10Q96LZ2 347 aaPredicted RBP13.41□□□□□ -0.26
PRDM16-210ENST00000607632 CDK15Q96Q40 435 aa13.41□□□□□ -0.26
PRDM16-210ENST00000607632 MTERF1Q99551 399 aaKnown RBP13.41□□□□□ -0.26
PRDM16-210ENST00000607632 MAPKAP1Q9BPZ7 522 aa13.41□□□□□ -0.26
PRDM16-210ENST00000607632 ERVK-6Q9BXR3 956 aa13.41□□□□□ -0.26
PRDM16-210ENST00000607632 DDX31Q9H8H2 851 aaKnown RBP13.41□□□□□ -0.26
PRDM16-210ENST00000607632 DCDC2Q9UHG0 476 aa13.41□□□□□ -0.26
PRDM16-210ENST00000607632 TEKT2Q9UIF3 430 aa13.41□□□□□ -0.26
PRDM16-210ENST00000607632 EMCNQ9ULC0 261 aa13.41□□□□□ -0.26
PRDM16-210ENST00000607632 NTNG1Q9Y2I2 539 aa13.41□□□□□ -0.26
PRDM16-210ENST00000607632 PCDHGB6Q9Y5F9 930 aa13.41□□□□□ -0.26
PRDM16-210ENST00000607632 A0A0A6YYD5 115 aa13.4□□□□□ -0.26
PRDM16-210ENST00000607632 TRAV17A0A0B4J275 112 aa13.4□□□□□ -0.26
PRDM16-210ENST00000607632 A0A1W2PPM1 405 aa13.4□□□□□ -0.26
PRDM16-210ENST00000607632 DYTNA2CJ06 578 aa13.4□□□□□ -0.26
PRDM16-210ENST00000607632 OR5H15A6NDH6 313 aa13.4□□□□□ -0.26
PRDM16-210ENST00000607632 CDH16O75309 829 aa13.4□□□□□ -0.26
PRDM16-210ENST00000607632 WDPCPO95876 746 aa13.4□□□□□ -0.26
PRDM16-210ENST00000607632 OTCP00480 354 aa13.4□□□□□ -0.26
PRDM16-210ENST00000607632 TAC1P20366 129 aa13.4□□□□□ -0.26
PRDM16-210ENST00000607632 ATP5F1P24539 256 aaPredicted RBP13.4□□□□□ -0.26
PRDM16-210ENST00000607632 BSGP35613 385 aa13.4□□□□□ -0.26
PRDM16-210ENST00000607632 HSD17B3P37058 310 aa13.4□□□□□ -0.26
PRDM16-210ENST00000607632 SSR2P43308 183 aa13.4□□□□□ -0.26
PRDM16-210ENST00000607632 PRKAA2P54646 552 aa13.4□□□□□ -0.26
PRDM16-210ENST00000607632 PHEXP78562 749 aa13.4□□□□□ -0.26
PRDM16-210ENST00000607632 DDX39BQ13838 428 aaKnown RBP13.4□□□□□ -0.26
PRDM16-210ENST00000607632 INAQ16352 499 aa13.4□□□□□ -0.26
PRDM16-210ENST00000607632 UNC50Q53HI1 259 aa13.4□□□□□ -0.26
PRDM16-210ENST00000607632 ACER2Q5QJU3 275 aa13.4□□□□□ -0.26
PRDM16-210ENST00000607632 ABHD17BQ5VST6 288 aa13.4□□□□□ -0.26
PRDM16-210ENST00000607632 FRG2Q64ET8 278 aa13.4□□□□□ -0.26
PRDM16-210ENST00000607632 LETMD1Q6P1Q0 360 aa13.4□□□□□ -0.26
PRDM16-210ENST00000607632 ATCAYQ86WG3 371 aa13.4□□□□□ -0.26
PRDM16-210ENST00000607632 MYLK4Q86YV6 388 aaPredicted RBP13.4□□□□□ -0.26
PRDM16-210ENST00000607632 CRLF3Q8IUI8 442 aa13.4□□□□□ -0.26
PRDM16-210ENST00000607632 CYP4X1Q8N118 509 aa13.4□□□□□ -0.26
PRDM16-210ENST00000607632 EFCAB3Q8N7B9 438 aa13.4□□□□□ -0.26
PRDM16-210ENST00000607632 CATSPER1Q8NEC5 780 aa13.4□□□□□ -0.26
PRDM16-210ENST00000607632 C7orf57Q8NEG2 295 aa13.4□□□□□ -0.26
PRDM16-210ENST00000607632 OR4F6Q8NGB9 312 aa13.4□□□□□ -0.26
PRDM16-210ENST00000607632 AENQ8WTP8 325 aaKnown RBP13.4□□□□□ -0.26
PRDM16-210ENST00000607632 L3HYPDHQ96EM0 354 aa13.4□□□□□ -0.26
PRDM16-210ENST00000607632 TMEM237Q96Q45 408 aa13.4□□□□□ -0.26
PRDM16-210ENST00000607632 FRG2BQ96QU4 278 aa13.4□□□□□ -0.26
PRDM16-210ENST00000607632 CENPKQ9BS16 269 aa13.4□□□□□ -0.26
PRDM16-210ENST00000607632 KCNK13Q9HB14 408 aa13.4□□□□□ -0.26
PRDM16-210ENST00000607632 ADAP2Q9NPF8 381 aa13.4□□□□□ -0.26
PRDM16-210ENST00000607632 ASF1BQ9NVP2 202 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms