RNA–Protein interactions for RNA: ENST00000604306.1

NEDD8-MDP1-203, Transcript of NEDD8-MDP1 readthrough, humanhuman

TSL 5

Gene NEDD8-MDP1, Length 681 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1-203ENST00000604306 SLITRK5O94991 958 aa11.66□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 KRT75O95678 551 aa11.66□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 BMP2P12643 396 aa11.66□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 HOXB3P14651 431 aaPredicted RBP11.66□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 ALOX12P18054 663 aa11.66□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 TCN1P20061 433 aaPredicted RBP11.66□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 BUD31P41223 144 aaPredicted RBP11.66□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 CCT8P50990 548 aa11.66□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 PLA2G16P53816 162 aa11.66□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 POLE2P56282 527 aa11.66□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 MTPNP58546 118 aa11.66□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 ARF3P61204 181 aaPredicted RBP11.66□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 SLAMF1Q13291 335 aa11.66□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 VEZF1Q14119 521 aa11.66□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 INAVAQ3KP66 663 aa11.66□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 TCTE1Q5JU00 501 aa11.66□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 NDUFAF5Q5TEU4 345 aa11.66□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 CPZQ66K79 652 aa11.66□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 SLC23A3Q6PIS1 610 aa11.66□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 WDR74Q6RFH5 385 aaPredicted RBP11.66□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 TMEM64Q6YI46 380 aa11.66□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 FKBP9P1Q75LS8 142 aa11.66□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 PRSS42Q7Z5A4 293 aa11.66□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 PLXDC1Q8IUK5 500 aa11.66□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 SFTPA2Q8IWL1 248 aa11.66□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 SLC30A8Q8IWU4 369 aa11.66□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 FAM20CQ8IXL6 584 aa11.66□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 MICU2Q8IYU8 434 aa11.66□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 DNAJC22Q8N4W6 341 aa11.66□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 EFCAB3Q8N7B9 438 aa11.66□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 OR4A15Q8NGL6 344 aa11.66□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 ADAMTS18Q8TE60 1221 aa11.66□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 SAP25Q8TEE9 199 aa11.66□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 ZFP90Q8TF47 636 aa11.66□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 MOAP1Q96BY2 351 aa11.66□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 MIEF2Q96C03 454 aa11.66□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 FAM120BQ96EK7 910 aaKnown RBP11.66□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 NECAB3Q96P71 396 aaPredicted RBP11.66□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 INPP5KQ9BT40 448 aa11.66□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 KLHL31Q9H511 634 aa11.66□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 TPT1P8Q9HAU6 139 aa11.66□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 OLAHQ9NV23 265 aa11.66□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 THUMPD1Q9NXG2 353 aaKnown RBP11.66□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 LRIT1Q9P2V4 623 aa11.66□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 PACSIN3Q9UKS6 424 aa11.66□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 PSME2Q9UL46 239 aa11.66□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 RNF215Q9Y6U7 377 aa11.66□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 COL6A3P12111 3177 aa11.66□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 ZDBF2Q9HCK1 2354 aa11.65□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 IGHV1OR21-1A0A087WYE8 117 aa11.65□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 A0A0J9YVX5 310 aa11.65□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 C4orf51C9J302 202 aa11.65□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 PROM1O43490 865 aa11.65□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 B3GALT2O43825 422 aa11.65□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 PCDHGA12O60330 932 aa11.65□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 ZBTB11O95625 1053 aaPredicted RBP11.65□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 GBAP04062 536 aa11.65□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 SYPP08247 313 aa11.65□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 ZNF883P0CG24 379 aa11.65□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 ZNF888P0CJ79 500 aaPredicted RBP11.65□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 FCGR1AP12314 374 aa11.65□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 ST6GAL1P15907 406 aa11.65□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 ATP6V1B2P21281 511 aa11.65□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 UQCRC2P22695 453 aa11.65□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 PSMA4P25789 261 aaKnown RBP11.65□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 NTSP30990 170 aa11.65□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 TLX1P31314 330 aaPredicted RBP11.65□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 CDKN2CP42773 168 aa11.65□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 HBA1P69905 142 aa11.65□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 TNFRSF17Q02223 184 aa11.65□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 RBBP4Q09028 425 aa11.65□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 ELOAQ14241 798 aaKnown RBP11.65□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 SELPLGQ14242 412 aa11.65□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 NDUFA9Q16795 377 aa11.65□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 MPEG1Q2M385 716 aa11.65□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 PRTGQ2VWP7 1150 aa11.65□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 SLC48A1Q6P1K1 146 aa11.65□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 CEP68Q76N32 757 aa11.65□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 SPATA24Q86W54 205 aa11.65□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 ANKRD46Q86W74 232 aa11.65□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.65□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 SLC35F3Q8IY50 421 aa11.65□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 CLECL1Q8IZS7 167 aa11.65□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 EID3Q8N140 333 aa11.65□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 PQLC1Q8N2U9 271 aa11.65□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 ARHGEF39Q8N4T4 335 aa11.65□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 CSNK1A1LQ8N752 337 aa11.65□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 FAM156AQ8NDB6 213 aa11.65□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 PAPD5Q8NDF8 572 aaKnown RBP11.65□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 CATSPER1Q8NEC5 780 aa11.65□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 OR52N2Q8NGI0 321 aa11.65□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 OR8K5Q8NH50 307 aa11.65□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 OR10A6Q8NH74 314 aa11.65□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 SFXN5Q8TD22 340 aa11.65□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 NUDT8Q8WV74 236 aa11.65□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 NAT6Q93015 286 aa11.65□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 NSMCE2Q96MF7 247 aa11.65□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 DPH2Q9BQC3 489 aaPredicted RBP11.65□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 CCDC3Q9BQI4 270 aa11.65□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 SORBS1Q9BX66 1292 aaKnown RBP11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms