RNA–Protein interactions for RNA: ENST00000603885.5

CCDC12-208, Transcript of coiled-coil domain containing 12, humanhuman

TSL 3

Gene CCDC12, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-208ENST00000603885 TEX9Q8N6V9 391 aa16.93■□□□□ 0.3
CCDC12-208ENST00000603885 NOA1Q8NC60 698 aaKnown RBP16.93■□□□□ 0.3
CCDC12-208ENST00000603885 TMEM52Q8NDY8 209 aa16.93■□□□□ 0.3
CCDC12-208ENST00000603885 ZNF473Q8WTR7 871 aaKnown RBP16.93■□□□□ 0.3
CCDC12-208ENST00000603885 IFT81Q8WYA0 676 aa16.93■□□□□ 0.3
CCDC12-208ENST00000603885 SCMH1Q96GD3 660 aa16.93■□□□□ 0.3
CCDC12-208ENST00000603885 FMO2Q99518 471 aa16.93■□□□□ 0.3
CCDC12-208ENST00000603885 TBCDQ9BTW9 1192 aa16.93■□□□□ 0.3
CCDC12-208ENST00000603885 HES7Q9BYE0 225 aa16.93■□□□□ 0.3
CCDC12-208ENST00000603885 CDC42EP4Q9H3Q1 356 aaKnown RBP16.93■□□□□ 0.3
CCDC12-208ENST00000603885 PRDM7Q9NQW5 492 aa16.93■□□□□ 0.3
CCDC12-208ENST00000603885 LRFN1Q9P244 771 aa16.93■□□□□ 0.3
CCDC12-208ENST00000603885 SEC14L3Q9UDX4 400 aa16.93■□□□□ 0.3
CCDC12-208ENST00000603885 DMGDHQ9UI17 866 aaKnown RBP16.93■□□□□ 0.3
CCDC12-208ENST00000603885 TRBV11-1A0A0K0K1C0 115 aa16.92■□□□□ 0.3
CCDC12-208ENST00000603885 CYR61O00622 381 aa16.92■□□□□ 0.3
CCDC12-208ENST00000603885 FCHO1O14526 889 aa16.92■□□□□ 0.3
CCDC12-208ENST00000603885 NEURL1O76050 574 aa16.92■□□□□ 0.3
CCDC12-208ENST00000603885 ACSL3O95573 720 aa16.92■□□□□ 0.3
CCDC12-208ENST00000603885 ALDOAP04075 364 aaKnown RBP16.92■□□□□ 0.3
CCDC12-208ENST00000603885 TUBB4AP04350 444 aa16.92■□□□□ 0.3
CCDC12-208ENST00000603885 INHBAP08476 426 aa16.92■□□□□ 0.3
CCDC12-208ENST00000603885 CLCN2P51788 898 aa16.92■□□□□ 0.3
CCDC12-208ENST00000603885 MLF1P58340 268 aa16.92■□□□□ 0.3
CCDC12-208ENST00000603885 SETDB1Q15047 1291 aa16.92■□□□□ 0.3
CCDC12-208ENST00000603885 PFKFB4Q16877 469 aa16.92■□□□□ 0.3
CCDC12-208ENST00000603885 UBAP2Q5T6F2 1119 aaKnown RBP16.92■□□□□ 0.3
CCDC12-208ENST00000603885 GRHL2Q6ISB3 625 aa16.92■□□□□ 0.3
CCDC12-208ENST00000603885 CHSY3Q70JA7 882 aa16.92■□□□□ 0.3
CCDC12-208ENST00000603885 FAM98AQ8NCA5 519 aaKnown RBP16.92■□□□□ 0.3
CCDC12-208ENST00000603885 APCDD1LQ8NCL9 501 aa16.92■□□□□ 0.3
CCDC12-208ENST00000603885 OR7G3Q8NG95 312 aa16.92■□□□□ 0.3
CCDC12-208ENST00000603885 CMTM7Q96FZ5 175 aa16.92■□□□□ 0.3
CCDC12-208ENST00000603885 VMP1Q96GC9 406 aa16.92■□□□□ 0.3
CCDC12-208ENST00000603885 CSF3RQ99062 836 aa16.92■□□□□ 0.3
CCDC12-208ENST00000603885 FUT8Q9BYC5 575 aa16.92■□□□□ 0.3
CCDC12-208ENST00000603885 VPS11Q9H270 941 aa16.92■□□□□ 0.3
CCDC12-208ENST00000603885 LYRM4Q9HD34 91 aa16.92■□□□□ 0.3
CCDC12-208ENST00000603885 ADAP2Q9NPF8 381 aa16.92■□□□□ 0.3
CCDC12-208ENST00000603885 ADGRE2Q9UHX3 823 aa16.92■□□□□ 0.3
CCDC12-208ENST00000603885 PPIEQ9UNP9 301 aaKnown RBP16.92■□□□□ 0.3
CCDC12-208ENST00000603885 CLDN16Q9Y5I7 305 aa16.92■□□□□ 0.3
CCDC12-208ENST00000603885 IKBKGQ9Y6K9 419 aa16.92■□□□□ 0.3
CCDC12-208ENST00000603885 SPACA6W5XKT8 324 aa16.92■□□□□ 0.3
CCDC12-208ENST00000603885 TGFBR3LH3BV60 316 aa16.91■□□□□ 0.3
CCDC12-208ENST00000603885 SLC25A12O75746 678 aa16.91■□□□□ 0.3
CCDC12-208ENST00000603885 MLYCDO95822 493 aa16.91■□□□□ 0.3
CCDC12-208ENST00000603885 CLDN1O95832 211 aa16.91■□□□□ 0.3
CCDC12-208ENST00000603885 TGFB1P01137 390 aa16.91■□□□□ 0.3
CCDC12-208ENST00000603885 SP1P08047 785 aa16.91■□□□□ 0.3
CCDC12-208ENST00000603885 PPP2R1BP30154 601 aa16.91■□□□□ 0.3
CCDC12-208ENST00000603885 CYB561P49447 251 aa16.91■□□□□ 0.3
CCDC12-208ENST00000603885 ALDH18A1P54886 795 aaKnown RBP16.91■□□□□ 0.3
CCDC12-208ENST00000603885 SRSF11Q05519 484 aaKnown RBP16.91■□□□□ 0.3
CCDC12-208ENST00000603885 RBPJQ06330 500 aa16.91■□□□□ 0.3
CCDC12-208ENST00000603885 AP5B1Q2VPB7 878 aa16.91■□□□□ 0.3
CCDC12-208ENST00000603885 GLE1Q53GS7 698 aaKnown RBP16.91■□□□□ 0.3
CCDC12-208ENST00000603885 ZNF468Q5VIY5 522 aaPredicted RBP16.91■□□□□ 0.3
CCDC12-208ENST00000603885 C1QL3Q5VWW1 255 aa16.91■□□□□ 0.3
CCDC12-208ENST00000603885 SLC25A25Q6KCM7 469 aa16.91■□□□□ 0.3
CCDC12-208ENST00000603885 ZNF793Q6ZN11 406 aa16.91■□□□□ 0.3
CCDC12-208ENST00000603885 TAOK1Q7L7X3 1001 aa16.91■□□□□ 0.3
CCDC12-208ENST00000603885 GALNTL5Q7Z4T8 443 aa16.91■□□□□ 0.3
CCDC12-208ENST00000603885 UBE3DQ7Z6J8 389 aa16.91■□□□□ 0.3
CCDC12-208ENST00000603885 CLNKQ7Z7G1 428 aa16.91■□□□□ 0.3
CCDC12-208ENST00000603885 FJX1Q86VR8 437 aa16.91■□□□□ 0.3
CCDC12-208ENST00000603885 MYLK4Q86YV6 388 aaPredicted RBP16.91■□□□□ 0.3
CCDC12-208ENST00000603885 ARMC10Q8N2F6 343 aa16.91■□□□□ 0.3
CCDC12-208ENST00000603885 ACOT4Q8N9L9 421 aa16.91■□□□□ 0.3
CCDC12-208ENST00000603885 SLC44A1Q8WWI5 657 aa16.91■□□□□ 0.3
CCDC12-208ENST00000603885 FBXW2Q9UKT8 454 aa16.91■□□□□ 0.3
CCDC12-208ENST00000603885 CENPEQ02224 2701 aa16.9■□□□□ 0.3
CCDC12-208ENST00000603885 ASPDHA6ND91 283 aa16.9■□□□□ 0.3
CCDC12-208ENST00000603885 KIF2AO00139 706 aaPredicted RBP16.9■□□□□ 0.3
CCDC12-208ENST00000603885 RTCAO00442 366 aaKnown RBP16.9■□□□□ 0.3
CCDC12-208ENST00000603885 KLK8O60259 260 aa16.9■□□□□ 0.3
CCDC12-208ENST00000603885 CTNSO60931 367 aa16.9■□□□□ 0.3
CCDC12-208ENST00000603885 SH3BGRLO75368 114 aa16.9■□□□□ 0.3
CCDC12-208ENST00000603885 IFNA16P05015 189 aa16.9■□□□□ 0.3
CCDC12-208ENST00000603885 HIST1H1TP22492 207 aaPredicted RBP16.9■□□□□ 0.3
CCDC12-208ENST00000603885 ATP5A1P25705 553 aaKnown RBP16.9■□□□□ 0.3
CCDC12-208ENST00000603885 TRHRP34981 398 aaPredicted RBP16.9■□□□□ 0.3
CCDC12-208ENST00000603885 SSR2P43308 183 aa16.9■□□□□ 0.3
CCDC12-208ENST00000603885 SERPINB9P50453 376 aa16.9■□□□□ 0.3
CCDC12-208ENST00000603885 HLCSP50747 726 aa16.9■□□□□ 0.3
CCDC12-208ENST00000603885 STX4Q12846 297 aa16.9■□□□□ 0.3
CCDC12-208ENST00000603885 DDX39BQ13838 428 aaKnown RBP16.9■□□□□ 0.3
CCDC12-208ENST00000603885 ELAVL1Q15717 326 aaKnown RBP16.9■□□□□ 0.3
CCDC12-208ENST00000603885 MAPKAPK3Q16644 382 aa16.9■□□□□ 0.3
CCDC12-208ENST00000603885 ZNF800Q2TB10 664 aaPredicted RBP eCLIP16.9■□□□□ 0.32e-10■□□□□ 11
CCDC12-208ENST00000603885 KHDRBS2Q5VWX1 349 aaKnown RBP16.9■□□□□ 0.3
CCDC12-208ENST00000603885 LIPJQ5W064 366 aa16.9■□□□□ 0.3
CCDC12-208ENST00000603885 TMEM132CQ8N3T6 1108 aa16.9■□□□□ 0.3
CCDC12-208ENST00000603885 THAP3Q8WTV1 239 aaPredicted RBP16.9■□□□□ 0.3
CCDC12-208ENST00000603885 NCLNQ969V3 563 aa16.9■□□□□ 0.3
CCDC12-208ENST00000603885 TMEM125Q96AQ2 219 aa16.9■□□□□ 0.3
CCDC12-208ENST00000603885 GPR78Q96P69 363 aa16.9■□□□□ 0.3
CCDC12-208ENST00000603885 MAPKAP1Q9BPZ7 522 aa16.9■□□□□ 0.3
CCDC12-208ENST00000603885 CCDC77Q9BR77 488 aa16.9■□□□□ 0.3
CCDC12-208ENST00000603885 CENPKQ9BS16 269 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms