RNA–Protein interactions for RNA: ENST00000603722.1

TUBE1-206, Transcript of tubulin epsilon 1, humanhuman

TSL 2

Gene TUBE1, Length 613 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-206ENST00000603722 UBE2E3Q969T4 207 aa15.29■□□□□ 0.04
TUBE1-206ENST00000603722 NCLNQ969V3 563 aa15.29■□□□□ 0.04
TUBE1-206ENST00000603722 FRMD6Q96NE9 622 aa15.29■□□□□ 0.04
TUBE1-206ENST00000603722 ROGDIQ9GZN7 287 aa15.29■□□□□ 0.04
TUBE1-206ENST00000603722 PRDM7Q9NQW5 492 aa15.29■□□□□ 0.04
TUBE1-206ENST00000603722 SH3BGRL2Q9UJC5 107 aa15.29■□□□□ 0.04
TUBE1-206ENST00000603722 FBXW2Q9UKT8 454 aa15.29■□□□□ 0.04
TUBE1-206ENST00000603722 ANGPTL3Q9Y5C1 460 aa15.29■□□□□ 0.04
TUBE1-206ENST00000603722 DOCK10Q96BY6 2186 aa15.28■□□□□ 0.04
TUBE1-206ENST00000603722 MYOCOSA0A1B0GUC4 107 aa15.28■□□□□ 0.04
TUBE1-206ENST00000603722 ASPDHA6ND91 283 aa15.28■□□□□ 0.04
TUBE1-206ENST00000603722 SAP18O00422 153 aaKnown RBP15.28■□□□□ 0.04
TUBE1-206ENST00000603722 FCHO1O14526 889 aa15.28■□□□□ 0.04
TUBE1-206ENST00000603722 ACSL3O95573 720 aa15.28■□□□□ 0.04
TUBE1-206ENST00000603722 TGFB1P01137 390 aa15.28■□□□□ 0.04
TUBE1-206ENST00000603722 ALDOAP04075 364 aaKnown RBP15.28■□□□□ 0.04
TUBE1-206ENST00000603722 EPB42P16452 691 aa15.28■□□□□ 0.04
TUBE1-206ENST00000603722 ALDH6A1Q02252 535 aaKnown RBP15.28■□□□□ 0.04
TUBE1-206ENST00000603722 DDX39BQ13838 428 aaKnown RBP15.28■□□□□ 0.04
TUBE1-206ENST00000603722 NAA30Q147X3 362 aaPredicted RBP15.28■□□□□ 0.04
TUBE1-206ENST00000603722 SETDB1Q15047 1291 aa15.28■□□□□ 0.04
TUBE1-206ENST00000603722 ZRSR2Q15696 482 aaKnown RBP15.28■□□□□ 0.04
TUBE1-206ENST00000603722 MAPKAPK3Q16644 382 aa15.28■□□□□ 0.04
TUBE1-206ENST00000603722 PFKFB4Q16877 469 aa15.28■□□□□ 0.04
TUBE1-206ENST00000603722 PNPLA5Q7Z6Z6 429 aaPredicted RBP15.28■□□□□ 0.04
TUBE1-206ENST00000603722 LAS2Q8IYD9 372 aa15.28■□□□□ 0.04
TUBE1-206ENST00000603722 RNF175Q8N4F7 328 aa15.28■□□□□ 0.04
TUBE1-206ENST00000603722 FAM98AQ8NCA5 519 aaKnown RBP15.28■□□□□ 0.04
TUBE1-206ENST00000603722 SRFBP1Q8NEF9 429 aaKnown RBP15.28■□□□□ 0.04
TUBE1-206ENST00000603722 OR7G3Q8NG95 312 aa15.28■□□□□ 0.04
TUBE1-206ENST00000603722 IFT81Q8WYA0 676 aa15.28■□□□□ 0.04
TUBE1-206ENST00000603722 VMP1Q96GC9 406 aa15.28■□□□□ 0.04
TUBE1-206ENST00000603722 TBCDQ9BTW9 1192 aa15.28■□□□□ 0.04
TUBE1-206ENST00000603722 VPS11Q9H270 941 aa15.28■□□□□ 0.04
TUBE1-206ENST00000603722 CDC42EP4Q9H3Q1 356 aaKnown RBP15.28■□□□□ 0.04
TUBE1-206ENST00000603722 ACSS3Q9H6R3 686 aa15.28■□□□□ 0.04
TUBE1-206ENST00000603722 LYRM4Q9HD34 91 aa15.28■□□□□ 0.04
TUBE1-206ENST00000603722 ADAP2Q9NPF8 381 aa15.28■□□□□ 0.04
TUBE1-206ENST00000603722 DMGDHQ9UI17 866 aaKnown RBP15.28■□□□□ 0.04
TUBE1-206ENST00000603722 ZNF223Q9UK11 482 aaPredicted RBP15.28■□□□□ 0.04
TUBE1-206ENST00000603722 SPTAN1Q13813 2472 aaKnown RBP15.28■□□□□ 0.04
TUBE1-206ENST00000603722 LRRC14BA6NHZ5 514 aa15.27■□□□□ 0.04
TUBE1-206ENST00000603722 NPIPA5E9PKD4 350 aa15.27■□□□□ 0.04
TUBE1-206ENST00000603722 NME2P1O60361 137 aa15.27■□□□□ 0.04
TUBE1-206ENST00000603722 KLHL2O95198 593 aa15.27■□□□□ 0.04
TUBE1-206ENST00000603722 IFNA16P05015 189 aa15.27■□□□□ 0.04
TUBE1-206ENST00000603722 NME2P22392 152 aa15.27■□□□□ 0.04
TUBE1-206ENST00000603722 HIST1H1TP22492 207 aaPredicted RBP15.27■□□□□ 0.04
TUBE1-206ENST00000603722 ATP5A1P25705 553 aaKnown RBP15.27■□□□□ 0.04
TUBE1-206ENST00000603722 TYK2P29597 1187 aa15.27■□□□□ 0.04
TUBE1-206ENST00000603722 SERPINB1P30740 379 aa15.27■□□□□ 0.04
TUBE1-206ENST00000603722 TRHRP34981 398 aaPredicted RBP15.27■□□□□ 0.04
TUBE1-206ENST00000603722 DCTP40126 519 aa15.27■□□□□ 0.04
TUBE1-206ENST00000603722 SSR2P43308 183 aa15.27■□□□□ 0.04
TUBE1-206ENST00000603722 HLCSP50747 726 aa15.27■□□□□ 0.04
TUBE1-206ENST00000603722 RBPJQ06330 500 aa15.27■□□□□ 0.04
TUBE1-206ENST00000603722 STX4Q12846 297 aa15.27■□□□□ 0.04
TUBE1-206ENST00000603722 ACAP2Q15057 778 aa15.27■□□□□ 0.04
TUBE1-206ENST00000603722 ELAVL1Q15717 326 aaKnown RBP15.27■□□□□ 0.04
TUBE1-206ENST00000603722 TMEM35AQ53FP2 167 aa15.27■□□□□ 0.04
TUBE1-206ENST00000603722 KHDRBS2Q5VWX1 349 aaKnown RBP15.27■□□□□ 0.04
TUBE1-206ENST00000603722 GRHL2Q6ISB3 625 aa15.27■□□□□ 0.04
TUBE1-206ENST00000603722 KLC3Q6P597 504 aa15.27■□□□□ 0.04
TUBE1-206ENST00000603722 CEP128Q6ZU80 1094 aa15.27■□□□□ 0.04
TUBE1-206ENST00000603722 ZNF227Q86WZ6 799 aa15.27■□□□□ 0.04
TUBE1-206ENST00000603722 RELL1Q8IUW5 271 aa15.27■□□□□ 0.04
TUBE1-206ENST00000603722 MMGT1Q8N4V1 131 aa15.27■□□□□ 0.04
TUBE1-206ENST00000603722 ACOT4Q8N9L9 421 aa15.27■□□□□ 0.04
TUBE1-206ENST00000603722 RELTQ969Z4 430 aa15.27■□□□□ 0.04
TUBE1-206ENST00000603722 GPR137Q96N19 417 aa15.27■□□□□ 0.04
TUBE1-206ENST00000603722 FMO2Q99518 471 aa15.27■□□□□ 0.04
TUBE1-206ENST00000603722 MAPKAP1Q9BPZ7 522 aa15.27■□□□□ 0.04
TUBE1-206ENST00000603722 CCDC77Q9BR77 488 aa15.27■□□□□ 0.04
TUBE1-206ENST00000603722 SORBS1Q9BX66 1292 aaKnown RBP15.27■□□□□ 0.04
TUBE1-206ENST00000603722 OR51B5Q9H339 312 aa15.27■□□□□ 0.04
TUBE1-206ENST00000603722 TRIM45Q9H8W5 580 aaPredicted RBP15.27■□□□□ 0.04
TUBE1-206ENST00000603722 NPIPA1Q9UND3 350 aa15.27■□□□□ 0.04
TUBE1-206ENST00000603722 PPIEQ9UNP9 301 aaKnown RBP15.27■□□□□ 0.04
TUBE1-206ENST00000603722 RP1L1Q8IWN7 2480 aaPredicted RBP15.27■□□□□ 0.03
TUBE1-206ENST00000603722 CPAMD8Q8IZJ3 1885 aa15.27■□□□□ 0.03
TUBE1-206ENST00000603722 ESPL1Q14674 2120 aa15.26■□□□□ 0.03
TUBE1-206ENST00000603722 DOPEY1Q5JWR5 2465 aa15.26■□□□□ 0.03
TUBE1-206ENST00000603722 SYNDIG1LA6NDD5 238 aa15.26■□□□□ 0.03
TUBE1-206ENST00000603722 CDK2AP1O14519 115 aa15.26■□□□□ 0.03
TUBE1-206ENST00000603722 PRKNO60260 465 aaPredicted RBP15.26■□□□□ 0.03
TUBE1-206ENST00000603722 SLC19A2O60779 497 aa15.26■□□□□ 0.03
TUBE1-206ENST00000603722 CTNSO60931 367 aa15.26■□□□□ 0.03
TUBE1-206ENST00000603722 ITGA10O75578 1167 aa15.26■□□□□ 0.03
TUBE1-206ENST00000603722 MLYCDO95822 493 aa15.26■□□□□ 0.03
TUBE1-206ENST00000603722 INHBAP08476 426 aa15.26■□□□□ 0.03
TUBE1-206ENST00000603722 CA7P43166 264 aa15.26■□□□□ 0.03
TUBE1-206ENST00000603722 ALDH18A1P54886 795 aaKnown RBP15.26■□□□□ 0.03
TUBE1-206ENST00000603722 PCDH1Q08174 1060 aa15.26■□□□□ 0.03
TUBE1-206ENST00000603722 CHSY3Q70JA7 882 aa15.26■□□□□ 0.03
TUBE1-206ENST00000603722 ARMC10Q8N2F6 343 aa15.26■□□□□ 0.03
TUBE1-206ENST00000603722 CPSF7Q8N684 471 aaKnown RBP15.26■□□□□ 0.03
TUBE1-206ENST00000603722 HUS1BQ8NHY5 278 aa15.26■□□□□ 0.03
TUBE1-206ENST00000603722 SREK1Q8WXA9 508 aaKnown RBP15.26■□□□□ 0.03
TUBE1-206ENST00000603722 TMEM125Q96AQ2 219 aa15.26■□□□□ 0.03
TUBE1-206ENST00000603722 CMTM7Q96FZ5 175 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms