RNA–Protein interactions for RNA: ENST00000602723.5

CSMD1-217, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 10,938 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-217ENST00000602723 ARL6Q9H0F7 186 aa9.27□□□□□ -0.93
CSMD1-217ENST00000602723 NOTCH3Q9UM47 2321 aa9.27□□□□□ -0.93
CSMD1-217ENST00000602723 ABCC6O95255 1503 aa9.27□□□□□ -0.93
CSMD1-217ENST00000602723 ALPPL2P10696 532 aa9.27□□□□□ -0.93
CSMD1-217ENST00000602723 ADH7P40394 386 aa9.27□□□□□ -0.93
CSMD1-217ENST00000602723 SPANXN4Q5MJ08 99 aa9.27□□□□□ -0.93
CSMD1-217ENST00000602723 ZSCAN4Q8NAM6 433 aaPredicted RBP9.27□□□□□ -0.93
CSMD1-217ENST00000602723 DRAXINQ8NBI3 349 aaPredicted RBP9.27□□□□□ -0.93
CSMD1-217ENST00000602723 PSD4Q8NDX1 1056 aa9.27□□□□□ -0.93
CSMD1-217ENST00000602723 SLC5A11Q8WWX8 675 aa9.27□□□□□ -0.93
CSMD1-217ENST00000602723 NUP188Q5SRE5 1749 aa9.27□□□□□ -0.93
CSMD1-217ENST00000602723 CDNFQ49AH0 187 aa9.27□□□□□ -0.93
CSMD1-217ENST00000602723 CARD16Q5EG05 197 aa9.27□□□□□ -0.93
CSMD1-217ENST00000602723 NKAPLQ5M9Q1 402 aa9.27□□□□□ -0.93
CSMD1-217ENST00000602723 TMEM53Q6P2H8 277 aa9.27□□□□□ -0.93
CSMD1-217ENST00000602723 P4HA3Q7Z4N8 544 aa9.27□□□□□ -0.93
CSMD1-217ENST00000602723 BEST3Q8N1M1 668 aa9.27□□□□□ -0.93
CSMD1-217ENST00000602723 POC1BQ8TC44 478 aa9.27□□□□□ -0.93
CSMD1-217ENST00000602723 AMY2BP19961 511 aa9.27□□□□□ -0.93
CSMD1-217ENST00000602723 PRKACGP22612 351 aa9.27□□□□□ -0.93
CSMD1-217ENST00000602723 MAP2K3P46734 347 aa9.27□□□□□ -0.93
CSMD1-217ENST00000602723 DNAJB13P59910 316 aa9.27□□□□□ -0.93
CSMD1-217ENST00000602723 FADDQ13158 208 aa9.27□□□□□ -0.93
CSMD1-217ENST00000602723 NCBP2-AS2Q69YL0 99 aa9.27□□□□□ -0.93
CSMD1-217ENST00000602723 FAM43BQ6ZT52 329 aaPredicted RBP9.27□□□□□ -0.93
CSMD1-217ENST00000602723 CEACAM19Q7Z692 300 aa9.27□□□□□ -0.93
CSMD1-217ENST00000602723 LRRTM4Q86VH4 590 aa9.27□□□□□ -0.93
CSMD1-217ENST00000602723 ACDQ96AP0 544 aa9.27□□□□□ -0.93
CSMD1-217ENST00000602723 EXTL2Q9UBQ6 330 aa9.27□□□□□ -0.93
CSMD1-217ENST00000602723 DKKL1Q9UK85 242 aa9.27□□□□□ -0.93
CSMD1-217ENST00000602723 RNF11Q9Y3C5 154 aa9.27□□□□□ -0.93
CSMD1-217ENST00000602723 MST1RQ04912 1400 aa9.27□□□□□ -0.93
CSMD1-217ENST00000602723 SNAP29O95721 258 aa9.27□□□□□ -0.93
CSMD1-217ENST00000602723 ALPIP09923 528 aa9.27□□□□□ -0.93
CSMD1-217ENST00000602723 FOSL1P15407 271 aa9.27□□□□□ -0.93
CSMD1-217ENST00000602723 DNASE1P24855 282 aa9.27□□□□□ -0.93
CSMD1-217ENST00000602723 CD97P48960 835 aa9.27□□□□□ -0.93
CSMD1-217ENST00000602723 GHRHRQ02643 423 aa9.27□□□□□ -0.93
CSMD1-217ENST00000602723 TSPAN33Q86UF1 283 aa9.27□□□□□ -0.93
CSMD1-217ENST00000602723 ZUFSPQ96AP4 578 aa9.27□□□□□ -0.93
CSMD1-217ENST00000602723 VILLO15195 856 aa9.27□□□□□ -0.93
CSMD1-217ENST00000602723 RPL10P27635 214 aaKnown RBP9.27□□□□□ -0.93
CSMD1-217ENST00000602723 ZNF616Q08AN1 781 aa9.27□□□□□ -0.93
CSMD1-217ENST00000602723 GTF2IRD2BQ6EKJ0 949 aa9.27□□□□□ -0.93
CSMD1-217ENST00000602723 C1orf94Q6P1W5 598 aa9.27□□□□□ -0.93
CSMD1-217ENST00000602723 GTF2IRD2Q86UP8 949 aa9.27□□□□□ -0.93
CSMD1-217ENST00000602723 HS3ST5Q8IZT8 346 aa9.27□□□□□ -0.93
CSMD1-217ENST00000602723 SMPDL3AQ92484 453 aa9.27□□□□□ -0.93
CSMD1-217ENST00000602723 OSBPL2Q9H1P3 480 aa9.27□□□□□ -0.93
CSMD1-217ENST00000602723 METTL7AQ9H8H3 244 aa9.27□□□□□ -0.93
CSMD1-217ENST00000602723 PRSS51A0A1B0GVH4 220 aa9.26□□□□□ -0.93
CSMD1-217ENST00000602723 GBAP04062 536 aa9.26□□□□□ -0.93
CSMD1-217ENST00000602723 CHMP24386 653 aa9.26□□□□□ -0.93
CSMD1-217ENST00000602723 GSTM2P28161 218 aa9.26□□□□□ -0.93
CSMD1-217ENST00000602723 AGTR1P30556 359 aa9.26□□□□□ -0.93
CSMD1-217ENST00000602723 ACTR1BP42025 376 aa9.26□□□□□ -0.93
CSMD1-217ENST00000602723 HYAL2Q12891 473 aa9.26□□□□□ -0.93
CSMD1-217ENST00000602723 PLEKHG7Q6ZR37 379 aa9.26□□□□□ -0.93
CSMD1-217ENST00000602723 SUN3Q8TAQ9 357 aa9.26□□□□□ -0.93
CSMD1-217ENST00000602723 CYB5D2Q8WUJ1 264 aa9.26□□□□□ -0.93
CSMD1-217ENST00000602723 PEX13Q92968 403 aa9.26□□□□□ -0.93
CSMD1-217ENST00000602723 POTEKPQ9BYX7 375 aa9.26□□□□□ -0.93
CSMD1-217ENST00000602723 NSUN3Q9H649 340 aaKnown RBP9.26□□□□□ -0.93
CSMD1-217ENST00000602723 RABL2AQ9UBK7 228 aaPredicted RBP9.26□□□□□ -0.93
CSMD1-217ENST00000602723 SRRDQ9UH36 339 aa9.26□□□□□ -0.93
CSMD1-217ENST00000602723 RABL2BQ9UNT1 228 aa9.26□□□□□ -0.93
CSMD1-217ENST00000602723 A0A1W2PPL8 197 aa9.26□□□□□ -0.93
CSMD1-217ENST00000602723 UNC119BA6NIH7 251 aa9.26□□□□□ -0.93
CSMD1-217ENST00000602723 ERCC1P07992 297 aaPredicted RBP9.26□□□□□ -0.93
CSMD1-217ENST00000602723 SNHG28P0DPA3 235 aa9.26□□□□□ -0.93
CSMD1-217ENST00000602723 CELP19835 753 aa9.26□□□□□ -0.93
CSMD1-217ENST00000602723 CAPN3P20807 821 aa9.26□□□□□ -0.93
CSMD1-217ENST00000602723 SNTA1Q13424 505 aa9.26□□□□□ -0.93
CSMD1-217ENST00000602723 RIN1Q13671 783 aa9.26□□□□□ -0.93
CSMD1-217ENST00000602723 SLC10A6Q3KNW5 377 aa9.26□□□□□ -0.93
CSMD1-217ENST00000602723 GLT8D1Q68CQ7 371 aa9.26□□□□□ -0.93
CSMD1-217ENST00000602723 KIF18BQ86Y91 864 aa9.26□□□□□ -0.93
CSMD1-217ENST00000602723 CPNE8Q86YQ8 564 aa9.26□□□□□ -0.93
CSMD1-217ENST00000602723 AVL9Q8NBF6 648 aa9.26□□□□□ -0.93
CSMD1-217ENST00000602723 ASB15Q8WXK1 588 aa9.26□□□□□ -0.93
CSMD1-217ENST00000602723 FUBP3Q96I24 572 aaKnown RBP eCLIP9.26□□□□□ -0.93
CSMD1-217ENST00000602723 RAD9AQ99638 391 aa9.26□□□□□ -0.93
CSMD1-217ENST00000602723 KATNBL1Q9H079 304 aa9.26□□□□□ -0.93
CSMD1-217ENST00000602723 FNIP2Q9P278 1114 aa9.26□□□□□ -0.93
CSMD1-217ENST00000602723 FAAHO00519 579 aa9.26□□□□□ -0.93
CSMD1-217ENST00000602723 STC1P52823 247 aa9.26□□□□□ -0.93
CSMD1-217ENST00000602723 LASP1Q14847 261 aaKnown RBP9.26□□□□□ -0.93
CSMD1-217ENST00000602723 SLC27A4Q6P1M0 643 aa9.26□□□□□ -0.93
CSMD1-217ENST00000602723 SHQ1Q6PI26 577 aaKnown RBP9.26□□□□□ -0.93
CSMD1-217ENST00000602723 OR2T33Q8NG76 320 aa9.26□□□□□ -0.93
CSMD1-217ENST00000602723 SLC35B2Q8TB61 432 aa9.26□□□□□ -0.93
CSMD1-217ENST00000602723 TBC1D15Q8TC07 691 aa9.26□□□□□ -0.93
CSMD1-217ENST00000602723 GNPDA2Q8TDQ7 276 aa9.26□□□□□ -0.93
CSMD1-217ENST00000602723 PBDC1Q9BVG4 233 aa9.26□□□□□ -0.93
CSMD1-217ENST00000602723 CFAP20Q9Y6A4 193 aaKnown RBP9.26□□□□□ -0.93
CSMD1-217ENST00000602723 CADP27708 2225 aa9.26□□□□□ -0.93
CSMD1-217ENST00000602723 DFNA5O60443 496 aa9.26□□□□□ -0.93
CSMD1-217ENST00000602723 RAD51DO75771 328 aa9.26□□□□□ -0.93
CSMD1-217ENST00000602723 HPRP00739 348 aa9.26□□□□□ -0.93
CSMD1-217ENST00000602723 IFNA1P01562 189 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms