RNA–Protein interactions for RNA: ENST00000600910.5

PNKP-215, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5 BASIC

Gene PNKP, Length 1,600 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-215ENST00000600910 METTL21CQ5VZV1 264 aa19.33■□□□□ 0.69
PNKP-215ENST00000600910 GPR180Q86V85 440 aa19.33■□□□□ 0.69
PNKP-215ENST00000600910 EFCAB3Q8N7B9 438 aa19.33■□□□□ 0.69
PNKP-215ENST00000600910 TM4SF18Q96CE8 201 aa19.33■□□□□ 0.69
PNKP-215ENST00000600910 SPRY4Q9C004 299 aa19.33■□□□□ 0.69
PNKP-215ENST00000600910 CLK4Q9HAZ1 481 aaKnown RBP19.33■□□□□ 0.69
PNKP-215ENST00000600910 TEX10Q9NXF1 929 aaPredicted RBP19.33■□□□□ 0.69
PNKP-215ENST00000600910 ARL2BPQ9Y2Y0 163 aa19.33■□□□□ 0.69
PNKP-215ENST00000600910 MAP4K5Q9Y4K4 846 aa19.33■□□□□ 0.69
PNKP-215ENST00000600910 ATG4BQ9Y4P1 393 aa19.33■□□□□ 0.69
PNKP-215ENST00000600910 DLGAP3O95886 979 aa19.33■□□□□ 0.68
PNKP-215ENST00000600910 KLK3P07288 261 aaPredicted RBP19.33■□□□□ 0.68
PNKP-215ENST00000600910 IDO1P14902 403 aa19.33■□□□□ 0.68
PNKP-215ENST00000600910 TRA2BP62995 288 aaKnown RBP19.33■□□□□ 0.68
PNKP-215ENST00000600910 GSTA3Q16772 222 aa19.33■□□□□ 0.68
PNKP-215ENST00000600910 IGF2-ASQ6U949 168 aa19.33■□□□□ 0.68
PNKP-215ENST00000600910 COX15Q7KZN9 410 aa19.33■□□□□ 0.68
PNKP-215ENST00000600910 OR51Q1Q8NH59 317 aa19.33■□□□□ 0.68
PNKP-215ENST00000600910 PUM2Q8TB72 1066 aaKnown RBP eCLIP19.33■□□□□ 0.68
PNKP-215ENST00000600910 PEX11GQ96HA9 241 aa19.33■□□□□ 0.68
PNKP-215ENST00000600910 SCNM1Q9BWG6 230 aa19.33■□□□□ 0.68
PNKP-215ENST00000600910 YIPF2Q9BWQ6 316 aa19.33■□□□□ 0.68
PNKP-215ENST00000600910 AKIRIN1Q9H9L7 192 aaPredicted RBP19.33■□□□□ 0.68
PNKP-215ENST00000600910 MYNNQ9NPC7 610 aa19.33■□□□□ 0.68
PNKP-215ENST00000600910 SLC22A11Q9NSA0 550 aa19.33■□□□□ 0.68
PNKP-215ENST00000600910 PHF11Q9UIL8 331 aa19.33■□□□□ 0.68
PNKP-215ENST00000600910 WASF3Q9UPY6 502 aa19.33■□□□□ 0.68
PNKP-215ENST00000600910 GPR45Q9Y5Y3 372 aa19.33■□□□□ 0.68
PNKP-215ENST00000600910 CDRT15L2A8MXV6 281 aa19.32■□□□□ 0.68
PNKP-215ENST00000600910 PROM1O43490 865 aa19.32■□□□□ 0.68
PNKP-215ENST00000600910 IL3P08700 152 aa19.32■□□□□ 0.68
PNKP-215ENST00000600910 AGXTP21549 392 aa19.32■□□□□ 0.68
PNKP-215ENST00000600910 SHC2P98077 582 aa19.32■□□□□ 0.68
PNKP-215ENST00000600910 RTP5Q14D33 572 aa19.32■□□□□ 0.68
PNKP-215ENST00000600910 RPS6KA2Q15349 733 aa19.32■□□□□ 0.68
PNKP-215ENST00000600910 LCN10Q6JVE6 187 aa19.32■□□□□ 0.68
PNKP-215ENST00000600910 CLNKQ7Z7G1 428 aa19.32■□□□□ 0.68
PNKP-215ENST00000600910 TMEM132CQ8N3T6 1108 aa19.32■□□□□ 0.68
PNKP-215ENST00000600910 GFM2Q969S9 779 aaKnown RBP19.32■□□□□ 0.68
PNKP-215ENST00000600910 SLC45A3Q96JT2 553 aa19.32■□□□□ 0.68
PNKP-215ENST00000600910 CSF3RQ99062 836 aa19.32■□□□□ 0.68
PNKP-215ENST00000600910 DPH2Q9BQC3 489 aaPredicted RBP19.32■□□□□ 0.68
PNKP-215ENST00000600910 BRINP2Q9C0B6 783 aa19.32■□□□□ 0.68
PNKP-215ENST00000600910 ASCL3Q9NQ33 180 aa19.32■□□□□ 0.68
PNKP-215ENST00000600910 MS4A12Q9NXJ0 267 aa19.32■□□□□ 0.68
PNKP-215ENST00000600910 TRPC4Q9UBN4 977 aa19.32■□□□□ 0.68
PNKP-215ENST00000600910 PCDHGA7Q9Y5G6 932 aa19.32■□□□□ 0.68
PNKP-215ENST00000600910 SPACA6W5XKT8 324 aa19.32■□□□□ 0.68
PNKP-215ENST00000600910 SPTBN2O15020 2390 aa19.32■□□□□ 0.68
PNKP-215ENST00000600910 SEC16AO15027 2179 aa19.31■□□□□ 0.68
PNKP-215ENST00000600910 A0A1W2PR48 441 aa19.31■□□□□ 0.68
PNKP-215ENST00000600910 GUCY1B2O75343 617 aa19.31■□□□□ 0.68
PNKP-215ENST00000600910 LRATO95237 230 aa19.31■□□□□ 0.68
PNKP-215ENST00000600910 ONECUT2O95948 504 aa19.31■□□□□ 0.68
PNKP-215ENST00000600910 RNH1P13489 461 aaKnown RBP19.31■□□□□ 0.68
PNKP-215ENST00000600910 CPN2P22792 545 aa19.31■□□□□ 0.68
PNKP-215ENST00000600910 XCR1P46094 333 aa19.31■□□□□ 0.68
PNKP-215ENST00000600910 GSTM5P46439 218 aa19.31■□□□□ 0.68
PNKP-215ENST00000600910 ASMTP46597 345 aa19.31■□□□□ 0.68
PNKP-215ENST00000600910 NME5P56597 212 aa19.31■□□□□ 0.68
PNKP-215ENST00000600910 RAB38P57729 211 aa19.31■□□□□ 0.68
PNKP-215ENST00000600910 NDUFAF5Q5TEU4 345 aa19.31■□□□□ 0.68
PNKP-215ENST00000600910 C18orf63Q68DL7 685 aa19.31■□□□□ 0.68
PNKP-215ENST00000600910 FAM199XQ6PEV8 388 aaPredicted RBP19.31■□□□□ 0.68
PNKP-215ENST00000600910 C6orf15Q6UXA7 325 aaPredicted RBP19.31■□□□□ 0.68
PNKP-215ENST00000600910 TIPARPQ7Z3E1 657 aaKnown RBP19.31■□□□□ 0.68
PNKP-215ENST00000600910 MMP21Q8N119 569 aa19.31■□□□□ 0.68
PNKP-215ENST00000600910 FAM47BQ8NA70 645 aa19.31■□□□□ 0.68
PNKP-215ENST00000600910 MR1Q95460 341 aa19.31■□□□□ 0.68
PNKP-215ENST00000600910 RBCK1Q9BYM8 510 aa19.31■□□□□ 0.68
PNKP-215ENST00000600910 ACTL8Q9H568 366 aa19.31■□□□□ 0.68
PNKP-215ENST00000600910 IFT80Q9P2H3 777 aaPredicted RBP19.31■□□□□ 0.68
PNKP-215ENST00000600910 COPG1Q9Y678 874 aaKnown RBP19.31■□□□□ 0.68
PNKP-215ENST00000600910 AK5Q9Y6K8 562 aa19.31■□□□□ 0.68
PNKP-215ENST00000600910 SDK2Q58EX2 2172 aa19.3■□□□□ 0.68
PNKP-215ENST00000600910 TRABD2BA6NFA1 517 aa19.3■□□□□ 0.68
PNKP-215ENST00000600910 FAM227AF5H4B4 570 aa19.3■□□□□ 0.68
PNKP-215ENST00000600910 PSMD12O00232 456 aaPredicted RBP19.3■□□□□ 0.68
PNKP-215ENST00000600910 PRKRAO75569 313 aaKnown RBP19.3■□□□□ 0.68
PNKP-215ENST00000600910 DXOO77932 396 aaKnown RBP19.3■□□□□ 0.68
PNKP-215ENST00000600910 AIFM1O95831 613 aa19.3■□□□□ 0.68
PNKP-215ENST00000600910 PIM1P11309 404 aaPredicted RBP19.3■□□□□ 0.68
PNKP-215ENST00000600910 BUD31P41223 144 aaPredicted RBP19.3■□□□□ 0.68
PNKP-215ENST00000600910 STX1BP61266 288 aa19.3■□□□□ 0.68
PNKP-215ENST00000600910 MC1RQ01726 317 aa19.3■□□□□ 0.68
PNKP-215ENST00000600910 TNFRSF17Q02223 184 aa19.3■□□□□ 0.68
PNKP-215ENST00000600910 KLC1Q07866 573 aa19.3■□□□□ 0.68
PNKP-215ENST00000600910 C2orf80Q0P641 193 aa19.3■□□□□ 0.68
PNKP-215ENST00000600910 FAM71E1Q6IPT2 247 aa19.3■□□□□ 0.68
PNKP-215ENST00000600910 ZNF517Q6ZMY9 492 aaPredicted RBP19.3■□□□□ 0.68
PNKP-215ENST00000600910 IKBIPQ70UQ0 350 aa19.3■□□□□ 0.68
PNKP-215ENST00000600910 CCDC197Q8NCU1 140 aa19.3■□□□□ 0.68
PNKP-215ENST00000600910 ZNF385DQ9H6B1 395 aa19.3■□□□□ 0.68
PNKP-215ENST00000600910 SDR39U1Q9NRG7 319 aaPredicted RBP19.3■□□□□ 0.68
PNKP-215ENST00000600910 CTSFQ9UBX1 484 aa19.3■□□□□ 0.68
PNKP-215ENST00000600910 WBP11Q9Y2W2 641 aaKnown RBP19.3■□□□□ 0.68
PNKP-215ENST00000600910 CYR61O00622 381 aa19.29■□□□□ 0.68
PNKP-215ENST00000600910 ANKRD28O15084 1053 aa19.29■□□□□ 0.68
PNKP-215ENST00000600910 AKAP10O43572 662 aa19.29■□□□□ 0.68
PNKP-215ENST00000600910 BRINP1O60477 761 aa19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms